BLASTX nr result

ID: Coptis24_contig00018575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018575
         (1304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269428.1| PREDICTED: probable E3 ubiquitin-protein lig...   578   e-163
emb|CAN70237.1| hypothetical protein VITISV_014614 [Vitis vinifera]   578   e-163
ref|XP_004149076.1| PREDICTED: probable E3 ubiquitin-protein lig...   536   e-150
ref|XP_002308433.1| predicted protein [Populus trichocarpa] gi|2...   531   e-148
ref|XP_002533218.1| ankyrin repeat-containing protein, putative ...   526   e-147

>ref|XP_002269428.1| PREDICTED: probable E3 ubiquitin-protein ligase XBOS32 [Vitis
            vinifera] gi|297743747|emb|CBI36630.3| unnamed protein
            product [Vitis vinifera]
          Length = 509

 Score =  578 bits (1491), Expect = e-163
 Identities = 285/389 (73%), Positives = 322/389 (82%), Gaps = 4/389 (1%)
 Frame = +3

Query: 3    ALHFAALNGHSRCIRLLLADYIPSLSNLWSILRKRPTGE-SITEFEEGILSKIVNKSADG 179
            ALH AALNGHSRCIRLLLADYIPS+ +LW+ILRKR   E SI+EF+EG L +++N+ ADG
Sbjct: 121  ALHLAALNGHSRCIRLLLADYIPSIPDLWNILRKRSNREESISEFDEGALCQVINRPADG 180

Query: 180  GITALHMAALNGHVESVQLLLDLGASVFELTAEDGTTIDLIGAGSTPLHYAACGGNVQCC 359
            GITALHMAALNGHVE++QLLLDLGAS+ E+T EDGTTIDLIGAGSTPLHYAACGGN QCC
Sbjct: 181  GITALHMAALNGHVETLQLLLDLGASLSEVTVEDGTTIDLIGAGSTPLHYAACGGNAQCC 240

Query: 360  QVLIANGASLIAENANGWTPLMVARSWNRDCLEGILCKPTAGRKEIVPSPYLALPLMSII 539
            Q+LIA GA L AENANGWTPLMVARSW+R  LE IL      +   + S YL+LPLMSI+
Sbjct: 241  QILIARGAYLAAENANGWTPLMVARSWHRGWLEEILSTQPEVQSRTISSSYLSLPLMSIV 300

Query: 540  QIARECGWKHGDSLPTCLDPCVVCLEGKCTVAAEGCGHEFCTRCALYLCSTNSTSTISHG 719
            +IARECGW++ DSLPTC DPCVVCLE KCTVAA+GC HEFCT+CALYLCS NS+ST+S  
Sbjct: 301  KIARECGWRNNDSLPTCQDPCVVCLERKCTVAAQGCDHEFCTKCALYLCSMNSSSTVSQC 360

Query: 720  PPGSITCPLCRHGIVLFVKLPGTNPTVKEIVRSSLSLTMCACSSETTEP--MLTQFCKPD 893
            P GSI CPLCR+GIV FVKLPGT P VKEI R+SLSL+ C CS E  EP  + T FCKPD
Sbjct: 361  PLGSIACPLCRNGIVSFVKLPGTKPLVKEIARTSLSLSFCTCSGEGPEPTSLTTPFCKPD 420

Query: 894  FRCNPISPLGPSSFRTLSCQRFPSMKLNSSLCMGAPDSSP-LVSCDADRRWRNHVVRCPR 1070
            F C+ ISPLG SSFR+LSCQRF S+KLNSSLCMGAPD+SP LV C  DR  RNH+ RC R
Sbjct: 421  FHCSRISPLG-SSFRSLSCQRFSSVKLNSSLCMGAPDTSPSLVPCTVDRNLRNHLARCSR 479

Query: 1071 PNLHRSASHSETRRSWFSSLNQYVATSSG 1157
              L RSASHSE+RRSWFS+LNQYVAT SG
Sbjct: 480  SGLRRSASHSESRRSWFSALNQYVATGSG 508


>emb|CAN70237.1| hypothetical protein VITISV_014614 [Vitis vinifera]
          Length = 511

 Score =  578 bits (1491), Expect = e-163
 Identities = 285/389 (73%), Positives = 322/389 (82%), Gaps = 4/389 (1%)
 Frame = +3

Query: 3    ALHFAALNGHSRCIRLLLADYIPSLSNLWSILRKRPTGE-SITEFEEGILSKIVNKSADG 179
            ALH AALNGHSRCIRLLLADYIPS+ +LW+ILRKR   E SI+EF+EG L +++N+ ADG
Sbjct: 123  ALHLAALNGHSRCIRLLLADYIPSIPDLWNILRKRSNREESISEFDEGALCQVINRPADG 182

Query: 180  GITALHMAALNGHVESVQLLLDLGASVFELTAEDGTTIDLIGAGSTPLHYAACGGNVQCC 359
            GITALHMAALNGHVE++QLLLDLGAS+ E+T EDGTTIDLIGAGSTPLHYAACGGN QCC
Sbjct: 183  GITALHMAALNGHVETLQLLLDLGASLSEVTVEDGTTIDLIGAGSTPLHYAACGGNAQCC 242

Query: 360  QVLIANGASLIAENANGWTPLMVARSWNRDCLEGILCKPTAGRKEIVPSPYLALPLMSII 539
            Q+LIA GA L AENANGWTPLMVARSW+R  LE IL      +   + S YL+LPLMSI+
Sbjct: 243  QILIARGAYLAAENANGWTPLMVARSWHRGWLEEILSTQPEVQSRTISSSYLSLPLMSIV 302

Query: 540  QIARECGWKHGDSLPTCLDPCVVCLEGKCTVAAEGCGHEFCTRCALYLCSTNSTSTISHG 719
            +IARECGW++ DSLPTC DPCVVCLE KCTVAA+GC HEFCT+CALYLCS NS+ST+S  
Sbjct: 303  KIARECGWRNNDSLPTCQDPCVVCLERKCTVAAQGCDHEFCTKCALYLCSMNSSSTVSQC 362

Query: 720  PPGSITCPLCRHGIVLFVKLPGTNPTVKEIVRSSLSLTMCACSSETTEP--MLTQFCKPD 893
            P GSI CPLCR+GIV FVKLPGT P VKEI R+SLSL+ C CS E  EP  + T FCKPD
Sbjct: 363  PLGSIACPLCRNGIVSFVKLPGTKPLVKEIARTSLSLSFCTCSGEGPEPTSLTTPFCKPD 422

Query: 894  FRCNPISPLGPSSFRTLSCQRFPSMKLNSSLCMGAPDSSP-LVSCDADRRWRNHVVRCPR 1070
            F C+ ISPLG SSFR+LSCQRF S+KLNSSLCMGAPD+SP LV C  DR  RNH+ RC R
Sbjct: 423  FHCSRISPLG-SSFRSLSCQRFSSVKLNSSLCMGAPDTSPSLVPCTVDRNLRNHLARCSR 481

Query: 1071 PNLHRSASHSETRRSWFSSLNQYVATSSG 1157
              L RSASHSE+RRSWFS+LNQYVAT SG
Sbjct: 482  SGLRRSASHSESRRSWFSALNQYVATGSG 510


>ref|XP_004149076.1| PREDICTED: probable E3 ubiquitin-protein ligase XBOS32-like [Cucumis
            sativus] gi|449517425|ref|XP_004165746.1| PREDICTED:
            probable E3 ubiquitin-protein ligase XBOS32-like [Cucumis
            sativus]
          Length = 510

 Score =  536 bits (1381), Expect = e-150
 Identities = 267/391 (68%), Positives = 307/391 (78%), Gaps = 6/391 (1%)
 Frame = +3

Query: 3    ALHFAALNGHSRCIRLLLADYIPSLSNLWSILRKRPTGES-ITEFEEGILSKIVNKSADG 179
            ALH AALNGHSRCIRLLLADY+PS    W++L      E  +++FE G L ++VN+++DG
Sbjct: 121  ALHLAALNGHSRCIRLLLADYVPSTPKFWNMLHGSSNNEEQVSKFEFGALKEVVNRTSDG 180

Query: 180  GITALHMAALNGHVESVQLLLDLGASVFELTAEDGTTIDLIGAGSTPLHYAACGGNVQCC 359
            GITALHMAALNGHV+SVQLLLDLGAS F++T EDGTTIDLIGAGST LHYAACGGN QCC
Sbjct: 181  GITALHMAALNGHVDSVQLLLDLGASAFQVTVEDGTTIDLIGAGSTALHYAACGGNAQCC 240

Query: 360  QVLIANGASLIAENANGWTPLMVARSWNRDCLEGILCKPT-AGRKEIVPSPYLALPLMSI 536
            Q+LIA GA L A+NANGWTPLMVARSW+RD L  IL +   A    +VPSPYL LPLMSI
Sbjct: 241  QMLIARGADLTAQNANGWTPLMVARSWHRDWLVEILSREAGAVATNLVPSPYLTLPLMSI 300

Query: 537  IQIARECGWKHGDSLPTCLDPCVVCLEGKCTVAAEGCGHEFCTRCALYLCSTNSTSTISH 716
            ++IARECGW+  DSL TC DPCVVCLE +CTVAA+GC HEFCTRCALYLCSTN TS++SH
Sbjct: 301  VRIARECGWRSCDSLLTCQDPCVVCLERECTVAAQGCDHEFCTRCALYLCSTNCTSSVSH 360

Query: 717  GPPGSITCPLCRHGIVLFVKLPGTNPTVKEIVRSSLSLTMCACSSETTEP--MLTQFCKP 890
            GP GSI CPLCR+GIV F+KLP T P  KEI R+SLSL+ C CS E  EP  + T  CKP
Sbjct: 361  GPTGSIACPLCRNGIVSFIKLPRTKPIAKEITRTSLSLSFCTCSGEAPEPPTLTTPLCKP 420

Query: 891  DFRCNPISPLGPSSFRTLSCQRFPSMKLNSSLCMGAP--DSSPLVSCDADRRWRNHVVRC 1064
            +F C+ ISPLG +SFR+LSCQRFPS+KLNS+LCMG P   SS LV CD DR  RNHV RC
Sbjct: 421  EFTCSRISPLG-ASFRSLSCQRFPSVKLNSNLCMGDPHSSSSSLVPCDVDRNMRNHVSRC 479

Query: 1065 PRPNLHRSASHSETRRSWFSSLNQYVATSSG 1157
             R +  R  + SE RRSW S+LNQYV T SG
Sbjct: 480  SRSSGFRRTA-SEGRRSWLSALNQYVTTGSG 509


>ref|XP_002308433.1| predicted protein [Populus trichocarpa] gi|222854409|gb|EEE91956.1|
            predicted protein [Populus trichocarpa]
          Length = 507

 Score =  531 bits (1367), Expect = e-148
 Identities = 261/389 (67%), Positives = 302/389 (77%), Gaps = 4/389 (1%)
 Frame = +3

Query: 3    ALHFAALNGHSRCIRLLLADYIPSLSNLWSILRK--RPTGESITEFEEGILSKIVNKSAD 176
            ALH AALNGHSRCIRLLLADYIPS+++ W IL K  R  G SI+EF+   L +++N+ AD
Sbjct: 121  ALHLAALNGHSRCIRLLLADYIPSIADCWDILSKGSRDNG-SISEFDGSALREVINRPAD 179

Query: 177  GGITALHMAALNGHVESVQLLLDLGASVFELTAEDGTTIDLIGAGSTPLHYAACGGNVQC 356
            GGITALHMAALNGHVESV LLLDLGAS +E+T EDGTTIDLIGAGST LHYAACGGN QC
Sbjct: 180  GGITALHMAALNGHVESVLLLLDLGASAYEVTVEDGTTIDLIGAGSTALHYAACGGNPQC 239

Query: 357  CQVLIANGASLIAENANGWTPLMVARSWNRDCLEGILCKPTAGRKEIVPSPYLALPLMSI 536
            CQ+LIA GASL AENA GWTPLMVARSW+R+ LE IL      + +I PSPY+++P MSI
Sbjct: 240  CQILIARGASLTAENAKGWTPLMVARSWHRNELEVILTTQQENQSQICPSPYVSIPFMSI 299

Query: 537  IQIARECGWKHGDSLPTCLDPCVVCLEGKCTVAAEGCGHEFCTRCALYLCSTNSTSTISH 716
            ++IARECGW++ DSLPTC D CVVCLE KCTVAAEGCGHEFCTRCALYLCST   ST++ 
Sbjct: 300  VKIARECGWRNNDSLPTCDDTCVVCLETKCTVAAEGCGHEFCTRCALYLCSTICISTVAQ 359

Query: 717  GPPGSITCPLCRHGIVLFVKLPGTNPTVKEIVRSSLSLTMCACSSETTE--PMLTQFCKP 890
            GP GS+ CPLCRHGIV FVKLPGT P VK I R+SLSL+ C C+ E  +   M T   KP
Sbjct: 360  GPTGSVACPLCRHGIVSFVKLPGTKPVVKAIARTSLSLSFCTCTGEEPDFPSMTTPLRKP 419

Query: 891  DFRCNPISPLGPSSFRTLSCQRFPSMKLNSSLCMGAPDSSPLVSCDADRRWRNHVVRCPR 1070
            DF+C  ISP  PSSFR+LSCQ+FPSM  N+S CMGA D++PLV C  D   R   VRC R
Sbjct: 420  DFQCTKISP--PSSFRSLSCQKFPSMNFNASRCMGASDTTPLVPCTIDLNPREREVRCSR 477

Query: 1071 PNLHRSASHSETRRSWFSSLNQYVATSSG 1157
              + RS S+ E R+SW S+LNQYV T +G
Sbjct: 478  SRIRRSTSNPERRKSWLSALNQYVTTGTG 506


>ref|XP_002533218.1| ankyrin repeat-containing protein, putative [Ricinus communis]
            gi|223526975|gb|EEF29171.1| ankyrin repeat-containing
            protein, putative [Ricinus communis]
          Length = 511

 Score =  526 bits (1354), Expect = e-147
 Identities = 262/391 (67%), Positives = 305/391 (78%), Gaps = 6/391 (1%)
 Frame = +3

Query: 3    ALHFAALNGHSRCIRLLLADYIPSLSNLWSILRKRPTG-ESITEFEEGILSKIVNKSADG 179
            ALH AALNGH+RC+RLLLADYIPS+S+ W+IL KR    ESI+EF+E  L +++N+ ADG
Sbjct: 121  ALHLAALNGHTRCVRLLLADYIPSISDCWNILAKRSNNSESISEFDESALHEVINRPADG 180

Query: 180  GITALHMAALNGHVESVQLLLDLGASVFELTAEDGTTIDLIGAGSTPLHYAACGGNVQCC 359
            GITALHMAALNGH+E+VQLLLDLGASV E+T EDGTTIDLIGAGST LHYAACGGN QCC
Sbjct: 181  GITALHMAALNGHLETVQLLLDLGASVSEVTVEDGTTIDLIGAGSTALHYAACGGNQQCC 240

Query: 360  QVLIANGASLIAENANGWTPLMVARSWNRDCLEGILCKPTAGRKEIVPSPYLALPLMSII 539
            Q+LIA GASLIAENANGWTPLMVARSW+R+ LE +L      + ++ PSPY++LPLMSII
Sbjct: 241  QMLIARGASLIAENANGWTPLMVARSWHRNQLEEMLSTQPEHQPQVCPSPYISLPLMSII 300

Query: 540  QIARECGWKHGDSLPTCLDPCVVCLEGKCTVAAEGCGHEFCTRCALYLCSTNSTSTISHG 719
            +IARECGW++ +SL TC D CVVCLE  CTVAAEGCGHEFCT CALYLCST  TS  + G
Sbjct: 301  KIARECGWRNEESLLTCQDTCVVCLERACTVAAEGCGHEFCTWCALYLCSTFCTSNAAQG 360

Query: 720  PPGSITCPLCRHGIVLFVKLPGTNPTVKEIVRSSLSLTMCACSSETTEP--MLTQFCKPD 893
             PGS+TCPLCRHGIV F KLPGT P +K I R+SLSL  C CS E  EP  M+T  CKPD
Sbjct: 361  FPGSVTCPLCRHGIVSFAKLPGTKPMMKAIGRTSLSLAFCTCSGEEPEPTSMITPLCKPD 420

Query: 894  FRCNPISPLGPSSFRTLSCQRFPSMKLNSSLCMGAPDSSP-LVSCDADRRWRNHVVRCPR 1070
            F C  ISPL  SSFR+LSCQ+FPSMK N+  CMG PD++P LV    DR    H+VRC R
Sbjct: 421  FGCTRISPLS-SSFRSLSCQKFPSMKFNARGCMGTPDTTPSLVPSTIDRNLGKHLVRCSR 479

Query: 1071 PNLHRSAS--HSETRRSWFSSLNQYVATSSG 1157
              L RS S  ++E RRSW S++NQY    +G
Sbjct: 480  SRLGRSTSNNYTERRRSWLSAINQYTTIGTG 510


Top