BLASTX nr result

ID: Coptis24_contig00018570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018570
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524002.1| conserved hypothetical protein [Ricinus comm...    97   2e-18
ref|XP_003633893.1| PREDICTED: uncharacterized protein LOC100854...    92   4e-17
emb|CBI38207.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002319751.1| predicted protein [Populus trichocarpa] gi|1...    88   8e-16
tpg|DAA60490.1| TPA: hypothetical protein ZEAMMB73_577262 [Zea m...    79   4e-13

>ref|XP_002524002.1| conserved hypothetical protein [Ricinus communis]
           gi|223536729|gb|EEF38370.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 81

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/67 (68%), Positives = 60/67 (89%)
 Frame = +3

Query: 111 SDDSKINLLKQIRSHEVAIAELNHLSSSRPVYQKNGNIYFRTSIQKATASEQRYLDSDKA 290
           + D K++L++++RSHEVA+AELN+LSSSR VYQKNGN++FRT+IQKATASEQ+ LDS KA
Sbjct: 14  ASDPKLDLVRKVRSHEVALAELNNLSSSRGVYQKNGNLFFRTTIQKATASEQKQLDSAKA 73

Query: 291 KLQKMNS 311
            L K+NS
Sbjct: 74  NLGKLNS 80


>ref|XP_003633893.1| PREDICTED: uncharacterized protein LOC100854074 [Vitis vinifera]
          Length = 85

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 45/67 (67%), Positives = 57/67 (85%)
 Frame = +3

Query: 111 SDDSKINLLKQIRSHEVAIAELNHLSSSRPVYQKNGNIYFRTSIQKATASEQRYLDSDKA 290
           + D K++ L QIRSHE AI EL++L +SR VYQKNGN++FRT+IQKATASEQ+ L+S KA
Sbjct: 18  ASDPKLHFLMQIRSHETAIGELSNLPTSRNVYQKNGNLFFRTTIQKATASEQKQLNSAKA 77

Query: 291 KLQKMNS 311
           KLQK+NS
Sbjct: 78  KLQKLNS 84


>emb|CBI38207.3| unnamed protein product [Vitis vinifera]
          Length = 125

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 45/67 (67%), Positives = 57/67 (85%)
 Frame = +3

Query: 111 SDDSKINLLKQIRSHEVAIAELNHLSSSRPVYQKNGNIYFRTSIQKATASEQRYLDSDKA 290
           + D K++ L QIRSHE AI EL++L +SR VYQKNGN++FRT+IQKATASEQ+ L+S KA
Sbjct: 58  ASDPKLHFLMQIRSHETAIGELSNLPTSRNVYQKNGNLFFRTTIQKATASEQKQLNSAKA 117

Query: 291 KLQKMNS 311
           KLQK+NS
Sbjct: 118 KLQKLNS 124


>ref|XP_002319751.1| predicted protein [Populus trichocarpa] gi|118484516|gb|ABK94133.1|
           unknown [Populus trichocarpa]
           gi|222858127|gb|EEE95674.1| predicted protein [Populus
           trichocarpa]
          Length = 70

 Score = 88.2 bits (217), Expect = 8e-16
 Identities = 42/60 (70%), Positives = 55/60 (91%)
 Frame = +3

Query: 120 SKINLLKQIRSHEVAIAELNHLSSSRPVYQKNGNIYFRTSIQKATASEQRYLDSDKAKLQ 299
           + ++L+K++RSHEVAIAEL++LSSSR VYQKNGN++FRT+ QKATASEQ+ LDS KAKL+
Sbjct: 10  TNLDLMKKVRSHEVAIAELSNLSSSRTVYQKNGNLFFRTTSQKATASEQKQLDSAKAKLE 69


>tpg|DAA60490.1| TPA: hypothetical protein ZEAMMB73_577262 [Zea mays]
          Length = 81

 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 37/66 (56%), Positives = 51/66 (77%)
 Frame = +3

Query: 117 DSKINLLKQIRSHEVAIAELNHLSSSRPVYQKNGNIYFRTSIQKATASEQRYLDSDKAKL 296
           + K+ LLK+IR+HEVAIAEL++L+ SR VYQK GNI+FR S++    +EQ+ LD  KA+L
Sbjct: 16  EKKVELLKEIRAHEVAIAELDNLNPSRAVYQKAGNIFFRKSVKSVITTEQKQLDQAKARL 75

Query: 297 QKMNSA 314
            K+N A
Sbjct: 76  SKLNQA 81


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