BLASTX nr result

ID: Coptis24_contig00018568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018568
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268262.1| PREDICTED: thioredoxin X, chloroplastic [Vit...   120   2e-25
ref|XP_003633059.1| PREDICTED: LOW QUALITY PROTEIN: thioredoxin ...   114   2e-23
gb|AFK48874.1| unknown [Medicago truncatula]                          112   7e-23
ref|XP_003592719.1| Thioredoxin-X [Medicago truncatula] gi|35548...   112   7e-23
ref|NP_001236422.1| uncharacterized protein LOC100500584 [Glycin...   111   1e-22

>ref|XP_002268262.1| PREDICTED: thioredoxin X, chloroplastic [Vitis vinifera]
          Length = 176

 Score =  120 bits (301), Expect = 2e-25
 Identities = 73/183 (39%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
 Frame = +1

Query: 49  MALMLYNSIPSVALPILPIRTPLSSGTSQKPYCLRTCIFSNKNYLLSVKGERKTEIPHCA 228
           M  M+ NS+P     + P+R   S      P  L    F+ K  L   + +RK     C+
Sbjct: 1   METMVSNSMPISVSSLPPVRVVAS------PRKLEFSSFTPKTTLFGSRSQRKIGF-RCS 53

Query: 229 SARNFPESCGV-PQIYLAEFSDTVLKSEVPVLVEFKAKWCPTSQLLNPTMEWASGKYKKK 405
             R    +CGV  +I  ++FSD VLK++ PVLVEF A WC   +L++P ME  + +Y  +
Sbjct: 54  PVRRAAVTCGVVTEIKESQFSDVVLKADEPVLVEFVATWCGPCRLISPAMEAIAQEYGDR 113

Query: 406 LKVVSVDRSSCPDLFEDYEVYKVPTLILFNKGKEI---TREGYMTKSKLRNYLDSALKSI 576
           L VV +D  + P L E+Y+VY +PTLILF  G+E+    REG +TK KL+ Y+D+ L+SI
Sbjct: 114 LTVVKIDHDANPRLIEEYKVYGLPTLILFKNGQEVPESRREGAITKGKLKEYVDALLESI 173

Query: 577 VVA 585
            VA
Sbjct: 174 SVA 176


>ref|XP_003633059.1| PREDICTED: LOW QUALITY PROTEIN: thioredoxin X, chloroplastic-like
           [Vitis vinifera]
          Length = 175

 Score =  114 bits (285), Expect = 2e-23
 Identities = 71/182 (39%), Positives = 102/182 (56%), Gaps = 3/182 (1%)
 Frame = +1

Query: 49  MALMLYNSIPSVALPILPIRTPLSSGTSQKPYCLRTCIFSNKNYLLSVKGERKTEIPHCA 228
           M  +L NS+P     + P+R   S      P  L    F+ K  L   + +RK     C+
Sbjct: 1   METILSNSMPISVSSLPPVRAVPS------PRKLEFSSFTPKTTLFGSRSQRKLGF-RCS 53

Query: 229 SARNFPESCGVPQIYLAEFSDTVLKSEVPVLVEFKAKWCPTSQLLNPTMEWASGKYKKKL 408
             R      GV +I  ++FSD VLK++ PVLVEF A WC   +L++  ME  + +Y  +L
Sbjct: 54  PRRAAVTCGGVTEIKESQFSDVVLKADGPVLVEFVATWCGPCRLISLAMEAIAXEYGDRL 113

Query: 409 KVVSVDRSSCPDLFEDYEVYKVPTLILFNKGKEI---TREGYMTKSKLRNYLDSALKSIV 579
            VV +D  + P L E+Y+VY +PTLILF  G+E+    REG +TK KL+ Y+D+ L+SI 
Sbjct: 114 TVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKGKLKEYVDALLESIS 173

Query: 580 VA 585
           VA
Sbjct: 174 VA 175


>gb|AFK48874.1| unknown [Medicago truncatula]
          Length = 181

 Score =  112 bits (280), Expect = 7e-23
 Identities = 67/171 (39%), Positives = 96/171 (56%), Gaps = 3/171 (1%)
 Frame = +1

Query: 79  SVALPILPIRTPLSSGTSQKPYCLRTCIFSNKNYLLSVKGERKTEIPHCASARNFPESCG 258
           ++ LP LP+RT  +S +      L       +  L S K           +   F  SCG
Sbjct: 12  TLTLPTLPVRTITASISVSSSLPLPRS--HRQQRLYSQKRSFSNSSSSSVAVPRFTVSCG 69

Query: 259 VPQIYLAEFSDTVLKSEVPVLVEFKAKWCPTSQLLNPTMEWASGKYKKKLKVVSVDRSSC 438
           + +I  ++F+ TVLKSE PVLVEF A WC   +L+ P ME  + +Y  +L VV +D  + 
Sbjct: 70  ITEINESQFNVTVLKSERPVLVEFVATWCGPCRLITPAMESIAQEYADRLTVVKIDHDAN 129

Query: 439 PDLFEDYEVYKVPTLILFNKGKEI---TREGYMTKSKLRNYLDSALKSIVV 582
           P L E+Y+VY +PTLILF  G+E     +EG +TK KL+ +LD+ L+SI V
Sbjct: 130 PQLIEEYKVYGLPTLILFKNGEEFPGSRKEGAITKVKLKQHLDALLESISV 180


>ref|XP_003592719.1| Thioredoxin-X [Medicago truncatula] gi|355481767|gb|AES62970.1|
           Thioredoxin-X [Medicago truncatula]
           gi|388492336|gb|AFK34234.1| unknown [Medicago
           truncatula]
          Length = 181

 Score =  112 bits (280), Expect = 7e-23
 Identities = 67/171 (39%), Positives = 96/171 (56%), Gaps = 3/171 (1%)
 Frame = +1

Query: 79  SVALPILPIRTPLSSGTSQKPYCLRTCIFSNKNYLLSVKGERKTEIPHCASARNFPESCG 258
           ++ LP LP+RT  +S +      L       +  L S K           +   F  SCG
Sbjct: 12  TLTLPTLPVRTITASISVSSSLPLPRS--HRQQRLYSQKRSFSNSSSSSVAVPKFTVSCG 69

Query: 259 VPQIYLAEFSDTVLKSEVPVLVEFKAKWCPTSQLLNPTMEWASGKYKKKLKVVSVDRSSC 438
           + +I  ++F+ TVLKSE PVLVEF A WC   +L+ P ME  + +Y  +L VV +D  + 
Sbjct: 70  ITEINESQFNVTVLKSERPVLVEFVATWCGPCRLITPAMESIAQEYADRLTVVKIDHDAN 129

Query: 439 PDLFEDYEVYKVPTLILFNKGKEI---TREGYMTKSKLRNYLDSALKSIVV 582
           P L E+Y+VY +PTLILF  G+E     +EG +TK KL+ +LD+ L+SI V
Sbjct: 130 PQLIEEYKVYGLPTLILFKNGEEFPGSRKEGAITKVKLKQHLDALLESISV 180


>ref|NP_001236422.1| uncharacterized protein LOC100500584 [Glycine max]
           gi|255630681|gb|ACU15700.1| unknown [Glycine max]
          Length = 181

 Score =  111 bits (278), Expect = 1e-22
 Identities = 65/173 (37%), Positives = 100/173 (57%), Gaps = 5/173 (2%)
 Frame = +1

Query: 82  VALPILPIRTPLSSGTSQKPYCLRTCIFSNKNYLLSVKGERKTEIPHCASARNFPESCG- 258
           ++LP +P+RT  +S ++     L      +    LS    R +   H ++      +CG 
Sbjct: 9   LSLPPVPVRTVSASASTSSSVPLTHSYSCSARQRLSSHRTRLSFRNHSSAVPKLTVTCGA 68

Query: 259 -VPQIYLAEFSDTVLKSEVPVLVEFKAKWCPTSQLLNPTMEWASGKYKKKLKVVSVDRSS 435
            V +I   +F DTVLK+  PVLVEF A WC   +L++  ME  + +Y+ +L VV +D  +
Sbjct: 69  AVTEINETQFKDTVLKANRPVLVEFVATWCGPCRLISSAMESLAKEYEDRLTVVKIDHDA 128

Query: 436 CPDLFEDYEVYKVPTLILFNKGKEI---TREGYMTKSKLRNYLDSALKSIVVA 585
            P L E+Y+VY +PTLILF  G+E+    REG +TK KL+ Y+D+ L+SI V+
Sbjct: 129 NPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYVDALLESISVS 181


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