BLASTX nr result

ID: Coptis24_contig00018558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018558
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242432.1| uncharacterized protein LOC100800393 [Glycin...    85   9e-15
ref|XP_003617999.1| Periodic tryptophan protein-like protein [Me...    84   2e-14
ref|XP_004165621.1| PREDICTED: uncharacterized WD repeat-contain...    84   2e-14
ref|XP_004149077.1| PREDICTED: uncharacterized WD repeat-contain...    84   2e-14
ref|XP_003544096.1| PREDICTED: uncharacterized WD repeat-contain...    84   3e-14

>ref|NP_001242432.1| uncharacterized protein LOC100800393 [Glycine max]
           gi|255642317|gb|ACU21423.1| unknown [Glycine max]
          Length = 477

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 37/52 (71%), Positives = 45/52 (86%)
 Frame = -3

Query: 617 SNNPKAGAVFTISFSEESPFLLAIGGSKGKLHVWDTLSDPGVARRFGKYSNR 462
           S +P+AG +F ISFSE++PFLLAIGGSKGKL VWDTLSD G++RR+G Y NR
Sbjct: 421 SKSPRAGVIFKISFSEDNPFLLAIGGSKGKLQVWDTLSDAGISRRYGNYKNR 472


>ref|XP_003617999.1| Periodic tryptophan protein-like protein [Medicago truncatula]
           gi|355519334|gb|AET00958.1| Periodic tryptophan
           protein-like protein [Medicago truncatula]
          Length = 485

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 37/53 (69%), Positives = 47/53 (88%)
 Frame = -3

Query: 617 SNNPKAGAVFTISFSEESPFLLAIGGSKGKLHVWDTLSDPGVARRFGKYSNRK 459
           S  PKAGAVF+ISFSE++PFLLAIGGSKGKL +WDTLSD G++RR+GK++  +
Sbjct: 428 SKEPKAGAVFSISFSEDNPFLLAIGGSKGKLQLWDTLSDEGISRRYGKFNRNQ 480


>ref|XP_004165621.1| PREDICTED: uncharacterized WD repeat-containing protein
           C17D11.16-like [Cucumis sativus]
          Length = 492

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 37/53 (69%), Positives = 46/53 (86%)
 Frame = -3

Query: 617 SNNPKAGAVFTISFSEESPFLLAIGGSKGKLHVWDTLSDPGVARRFGKYSNRK 459
           S NPKAGAVF++SFSE+ PFLLAIGGSKGKL VWDTL+D  V+R++G YS ++
Sbjct: 439 STNPKAGAVFSVSFSEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYSQQR 491


>ref|XP_004149077.1| PREDICTED: uncharacterized WD repeat-containing protein
           C17D11.16-like [Cucumis sativus]
          Length = 493

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 37/53 (69%), Positives = 46/53 (86%)
 Frame = -3

Query: 617 SNNPKAGAVFTISFSEESPFLLAIGGSKGKLHVWDTLSDPGVARRFGKYSNRK 459
           S NPKAGAVF++SFSE+ PFLLAIGGSKGKL VWDTL+D  V+R++G YS ++
Sbjct: 440 STNPKAGAVFSVSFSEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYSQQR 492


>ref|XP_003544096.1| PREDICTED: uncharacterized WD repeat-containing protein
           C17D11.16-like [Glycine max]
          Length = 478

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 36/53 (67%), Positives = 46/53 (86%)
 Frame = -3

Query: 617 SNNPKAGAVFTISFSEESPFLLAIGGSKGKLHVWDTLSDPGVARRFGKYSNRK 459
           S +P+AGA+F ISFSE++PFLLAIGGSKGKL VWDTLSD G++RR+G Y+  +
Sbjct: 421 SKSPRAGAIFKISFSEDNPFLLAIGGSKGKLQVWDTLSDSGISRRYGNYNKNR 473


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