BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018553
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20034.3| unnamed protein product [Vitis vinifera]              246   7e-63
ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containi...   232   8e-59
ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containi...   232   1e-58
emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]   232   1e-58
ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containi...   231   1e-58

>emb|CBI20034.3| unnamed protein product [Vitis vinifera]
          Length = 596

 Score =  246 bits (627), Expect = 7e-63
 Identities = 135/265 (50%), Positives = 170/265 (64%), Gaps = 4/265 (1%)
 Frame = -1

Query: 783 GERWVCRQQMCFLNGISLPMSHFIHYSFDSYFHCSLGQVSCLLPHSFSHSFPQEQMLTPL 604
           G+R +  QQ+  L+G+SL +S  + YS     H    +V  LLPH  S   P  Q+L P 
Sbjct: 45  GQRRLGGQQVRLLDGLSLSLSRLLQYSLHCRHHRPHCEVPPLLPHPSSLCLPHPQVLAPN 104

Query: 603 RTKITVAYLSTGVVSSRGFC-SVGND---DSDVXXXXXXXXXXXXXXESKADGKEVERVC 436
            T   +         SRGF  ++G D   D +                S AD +EV RVC
Sbjct: 105 STPSLLGSPQFLGSFSRGFARALGGDQHSDPEPDGDNVGGDFDEVNVNSGADPEEVSRVC 164

Query: 435 KVINELFASDRNMEGILDQCGIXXXXXXXXXXXDRFKHARKPAFRFFGWAGEKEGFEHDS 256
           +VI+ELFA DRNME +LD+C +           +RFKHARKPAFRFF WAG+K GF H+S
Sbjct: 165 RVIDELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNS 224

Query: 255 RTYNSMMGILGKTRQLESMVAMMEEMGKKGLLTMETFSIAIRSFAGAREMKKAIGIFELM 76
           RTYN+MM +LG+TRQ ESM+ M+ EMG+KGLLTMETFSIAI++FA A+E KKA+G+FELM
Sbjct: 225 RTYNAMMSVLGRTRQFESMMGMLGEMGEKGLLTMETFSIAIKAFAAAKERKKAVGVFELM 284

Query: 75  KKYNYKAGVDTFNSLLDALGRAKLG 1
           K+YN+ AGVDT N LLD LGRAKLG
Sbjct: 285 KRYNFDAGVDTINCLLDNLGRAKLG 309


>ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Cucumis sativus]
           gi|449490811|ref|XP_004158714.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Cucumis sativus]
          Length = 621

 Score =  232 bits (592), Expect = 8e-59
 Identities = 128/263 (48%), Positives = 163/263 (61%), Gaps = 4/263 (1%)
 Frame = -1

Query: 777 RWVCRQQMCFLNGISLPMSHFIHYSFDSYFHCSLGQVSCLLPHSFSHSFPQEQMLTPLRT 598
           RW  R   C     SLP+           FH S  Q+  +LP++ S S PQE++L  + T
Sbjct: 40  RWKMRVPGCS----SLPLFSMFDSPSHRSFHYSHCQIPFILPYASSFSVPQEKLLI-VST 94

Query: 597 KITVAYLSTGVVS----SRGFCSVGNDDSDVXXXXXXXXXXXXXXESKADGKEVERVCKV 430
             T+ + +    S    +RGFC + N DSD                 + D  EV RVCKV
Sbjct: 95  LRTIDFRNPPFPSLDLLARGFCDLSNPDSD---SEIECEKSEEEDNRECDSTEVNRVCKV 151

Query: 429 INELFASDRNMEGILDQCGIXXXXXXXXXXXDRFKHARKPAFRFFGWAGEKEGFEHDSRT 250
           I+ELFA DRNME +LD+CG+            RFK ARKPAFRFF WA +K GF HDS+T
Sbjct: 152 IDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKT 211

Query: 249 YNSMMGILGKTRQLESMVAMMEEMGKKGLLTMETFSIAIRSFAGAREMKKAIGIFELMKK 70
           YN+MM ILGKTRQ E+MV+++EEM +K LLTMETF++  ++FA A+E KKA+G+ ELMKK
Sbjct: 212 YNTMMTILGKTRQFETMVSLLEEMAEKELLTMETFTVCFKAFAAAKERKKAVGVLELMKK 271

Query: 69  YNYKAGVDTFNSLLDALGRAKLG 1
           Y YK GV+T N LLD+LGRAKLG
Sbjct: 272 YKYKVGVETINCLLDSLGRAKLG 294


>ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Glycine max]
          Length = 648

 Score =  232 bits (591), Expect = 1e-58
 Identities = 142/291 (48%), Positives = 173/291 (59%), Gaps = 16/291 (5%)
 Frame = -1

Query: 825 STTKL---YNGNETHRRGERWVCRQQMCFLNGISLPMSHFIHYSFDSYFHCSLGQVSCLL 655
           STTKL   +      RRGE      Q+    G SLP+S  +  S +  FH S  Q+  LL
Sbjct: 39  STTKLRSLHQRRPPQRRGE------QVRLPCGSSLPLSRLLRSSLNCTFHHSRCQIPFLL 92

Query: 654 PHSFSHSFPQEQMLTPLRTKITVAYLSTG------VVSSRGFCSVGN-------DDSDVX 514
           PH       Q+++L P     +    S        + S R F S  +       DD D  
Sbjct: 93  PHPSPLLTLQKKLLIPHLATFSALPSSPFHEKFPFLNSPRTFASNADSGVENDDDDDDGG 152

Query: 513 XXXXXXXXXXXXXESKADGKEVERVCKVINELFASDRNMEGILDQCGIXXXXXXXXXXXD 334
                        ES AD  EVERVCKVI+ELFA DRNME +LD+CG+            
Sbjct: 153 DGDKGYDGRGVSGESCADPVEVERVCKVIDELFALDRNMEVVLDECGVRLSHDLVVDVLQ 212

Query: 333 RFKHARKPAFRFFGWAGEKEGFEHDSRTYNSMMGILGKTRQLESMVAMMEEMGKKGLLTM 154
           RFKHARKPAFRFF WAG++ GF HDSRTYN MM +LG+TRQ E+MVAM+EEMG+KGLLTM
Sbjct: 213 RFKHARKPAFRFFCWAGKRPGFAHDSRTYNFMMCVLGRTRQFETMVAMLEEMGEKGLLTM 272

Query: 153 ETFSIAIRSFAGAREMKKAIGIFELMKKYNYKAGVDTFNSLLDALGRAKLG 1
           ETFSIAI++FA A++ KKA+GIF+LMKKY +K GVD  N LLD+L  AKLG
Sbjct: 273 ETFSIAIKAFAEAKQRKKAVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLG 323


>emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
          Length = 927

 Score =  232 bits (591), Expect = 1e-58
 Identities = 139/310 (44%), Positives = 172/310 (55%), Gaps = 49/310 (15%)
 Frame = -1

Query: 783 GERWVCRQQMCFLNGISLPMSHFIHYSFDSYFHCSLGQVSCLLPHSFSHSFPQEQMLTPL 604
           G+R +  QQ+  L+G+SL +S  + YS     H    +V  LLPH  S   P  Q+L P 
Sbjct: 45  GQRRLGGQQVRLLDGLSLSLSRLLQYSLHCRHHRPHCEVPPLLPHPSSLCLPHPQVLAPN 104

Query: 603 RTKITVA------YLSTGVVS--------------------------------------S 556
            T   +       + S G                                         S
Sbjct: 105 STPSLLGSPQFLGFFSRGFAGALGGDQHSDPEPDGDVGDNGVVDYDGALVNSGADTEEKS 164

Query: 555 RGFCSV--GNDDSDVXXXXXXXXXXXXXXE---SKADGKEVERVCKVINELFASDRNMEG 391
           RGF  V  G  DSD                   S AD +EV RVC+VI+ELFA DRNME 
Sbjct: 165 RGFSRVSQGETDSDPETDGDENVGGDLDEVNVNSGADPEEVSRVCRVIDELFALDRNMEA 224

Query: 390 ILDQCGIXXXXXXXXXXXDRFKHARKPAFRFFGWAGEKEGFEHDSRTYNSMMGILGKTRQ 211
           +LD+C +           +RFKHARKPAFRFF WAG+K GF H+SRTYN+MM +LG+TRQ
Sbjct: 225 VLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQ 284

Query: 210 LESMVAMMEEMGKKGLLTMETFSIAIRSFAGAREMKKAIGIFELMKKYNYKAGVDTFNSL 31
            ESM+ M+ EMG+KGLLTMETFSIAI++FA A+E KKA+G+FELMK+YN+ AGVDT N L
Sbjct: 285 FESMMGMLGEMGEKGLLTMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCL 344

Query: 30  LDALGRAKLG 1
           LD LGRAKLG
Sbjct: 345 LDNLGRAKLG 354


>ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Vitis vinifera]
          Length = 679

 Score =  231 bits (590), Expect = 1e-58
 Identities = 139/310 (44%), Positives = 175/310 (56%), Gaps = 49/310 (15%)
 Frame = -1

Query: 783 GERWVCRQQMCFLNGISLPMSHFIHYSFDSYFHCSLGQVSCLLPHSFSHSFPQEQMLTPL 604
           G+R +  QQ+  L+G+SL +S  + YS     H    +V  LLPH  S   P  Q+L P 
Sbjct: 45  GQRRLGGQQVRLLDGLSLSLSRLLQYSLHCRHHRPHCEVPPLLPHPSSLCLPHPQVLAPN 104

Query: 603 RTKITV-----------------------------------------AYLSTGVVS---S 556
            T   +                                         A +++G  +   S
Sbjct: 105 STPSLLGSPQFLGSFSRGFARALGGDQHSDPEPDGDVGDNGVGDYDGALVNSGADTEEKS 164

Query: 555 RGFCSV--GNDDSDVXXXXXXXXXXXXXXE---SKADGKEVERVCKVINELFASDRNMEG 391
           RGF  V  G  DSD                   S AD +EV RVC+VI+ELFA DRNME 
Sbjct: 165 RGFSRVSQGETDSDPETDGDENVGGDFDEVNVNSGADPEEVSRVCRVIDELFALDRNMEA 224

Query: 390 ILDQCGIXXXXXXXXXXXDRFKHARKPAFRFFGWAGEKEGFEHDSRTYNSMMGILGKTRQ 211
           +LD+C +           +RFKHARKPAFRFF WAG+K GF H+SRTYN+MM +LG+TRQ
Sbjct: 225 VLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQ 284

Query: 210 LESMVAMMEEMGKKGLLTMETFSIAIRSFAGAREMKKAIGIFELMKKYNYKAGVDTFNSL 31
            ESM+ M+ EMG+KGLLTMETFSIAI++FA A+E KKA+G+FELMK+YN+ AGVDT N L
Sbjct: 285 FESMMGMLGEMGEKGLLTMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCL 344

Query: 30  LDALGRAKLG 1
           LD LGRAKLG
Sbjct: 345 LDNLGRAKLG 354