BLASTX nr result

ID: Coptis24_contig00018550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018550
         (1019 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275746.2| PREDICTED: momilactone A synthase-like [Viti...   351   1e-94
gb|ADD70246.1| secoisolariciresinol dehydrogenase [Dysosma tsayu...   350   3e-94
gb|ABN14311.1| secoisolariciresinol dehydrogenase [Sinopodophyll...   349   5e-94
pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol ...   343   3e-92
gb|ACB87357.1| secoisolariciresinol dehydrogenase [Dysosma versi...   339   6e-91

>ref|XP_002275746.2| PREDICTED: momilactone A synthase-like [Vitis vinifera]
          Length = 280

 Score =  351 bits (901), Expect = 1e-94
 Identities = 175/274 (63%), Positives = 223/274 (81%), Gaps = 1/274 (0%)
 Frame = -2

Query: 991 MAGNSRVTTNISGRLEDKVAVITGGASGIGESTARLFVSHGAKVVIGDVQDDLGHTLCRD 812
           M G++ V   I  RLE KVA+ITGGASGIGESTARLFV HGAKV+I DVQDD+G ++C  
Sbjct: 1   MNGHASVVP-IGKRLEGKVAIITGGASGIGESTARLFVRHGAKVIIADVQDDIGLSICEA 59

Query: 811 IGSDNI-SFVHCDVTNDDDVRTLVETAVSKYGKLDIMYCNAGIPGDVPNNLVDVKNESFQ 635
           +GS    SFVHCDVT+D DV+ +V+TAVSKYGKLDIM+ NAGI G++   ++  +NE+F+
Sbjct: 60  LGSHGTASFVHCDVTSDSDVKNVVDTAVSKYGKLDIMFNNAGISGNLDPTILGTENENFR 119

Query: 634 RVMNINTYGAYLGAKHAAKVMIPEKKGSIIFTASMSSVMGGLDVPHAYAASKHAVLGLTK 455
           RV ++N YGA+LGAKHAA+VMIP KKG I+FT+S++SV  G + PHAY  SKHAV+GLTK
Sbjct: 120 RVFDVNVYGAFLGAKHAARVMIPAKKGVILFTSSVASVTSG-ESPHAYTMSKHAVVGLTK 178

Query: 454 NLCVELGQHGIRVNCISPFVIASPMLTKVFGVEASLLEDLVCRAANLKGVVLKSEDVAQA 275
           NLCVELGQHGIRVNCISP  IA+P+L    G+E   +E +VC +ANLKGVV ++EDVA+A
Sbjct: 179 NLCVELGQHGIRVNCISPCAIATPLLRNAMGLEKKTVEGIVCASANLKGVVAEAEDVAEA 238

Query: 274 AVFLASEESRYVSGLNLLLDGGYTSTNAAFPMIV 173
           AV+L S+ES+YVSGLNL++DGGY++TN +F M+V
Sbjct: 239 AVYLGSDESKYVSGLNLVVDGGYSTTNQSFTMVV 272


>gb|ADD70246.1| secoisolariciresinol dehydrogenase [Dysosma tsayuensis]
          Length = 278

 Score =  350 bits (898), Expect = 3e-94
 Identities = 171/275 (62%), Positives = 221/275 (80%), Gaps = 2/275 (0%)
 Frame = -2

Query: 985 GNSRVTTNISGRLEDKVAVITGGASGIGESTARLFVSHGAKVVIGDVQDDLGHTLCRDIG 806
           G +    + + RL+DKVA+ITGGA GIGE+TA+LFV +GAKVVI D+ DD G  +C++IG
Sbjct: 2   GFTSTPASSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADISDDHGQKVCKNIG 61

Query: 805 S-DNISFVHCDVTNDDDVRTLVETAVSKYGKLDIMYCNAGIPGDVPNNLVDVKNESFQRV 629
           S D ISFVHCDVT D+DVR LV+T ++K+GKLDIM+ N G+    P ++++  NE F+RV
Sbjct: 62  SPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRV 121

Query: 628 MNINTYGAYLGAKHAAKVMIPEKKGSIIFTASMSSVMGGLDVPHAYAASKHAVLGLTKNL 449
           M+IN YGA+L AKHAA+VMIP KKGSI+FTAS+SS   G  V HAY A+KHAVLGLT +L
Sbjct: 122 MDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHAYTATKHAVLGLTTSL 181

Query: 448 CVELGQHGIRVNCISPFVIASPMLTKVFGVEASLLEDLVCRAANLKGVVLKSEDVAQAAV 269
           C ELGQHGIRVNC+SP+V+ASP+LT VFGV++S +E+L  +AANLKG++L++EDVA A  
Sbjct: 182 CTELGQHGIRVNCVSPYVVASPLLTDVFGVDSSRVEELAHQAANLKGILLRAEDVADAVA 241

Query: 268 FLASEESRYVSGLNLLLDGGYTSTNAAFP-MIVHG 167
           +LA +ES+YVSGLNL++DGGYT TN AFP  + HG
Sbjct: 242 YLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHG 276


>gb|ABN14311.1| secoisolariciresinol dehydrogenase [Sinopodophyllum hexandrum]
          Length = 278

 Score =  349 bits (896), Expect = 5e-94
 Identities = 170/275 (61%), Positives = 220/275 (80%), Gaps = 2/275 (0%)
 Frame = -2

Query: 985 GNSRVTTNISGRLEDKVAVITGGASGIGESTARLFVSHGAKVVIGDVQDDLGHTLCRDIG 806
           G++    + + RL+DKVA+ITGGA GIGE+TA+LFV +GAKVVI D+ DD G  +C +IG
Sbjct: 2   GSTSTPASSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADISDDHGQKVCNNIG 61

Query: 805 S-DNISFVHCDVTNDDDVRTLVETAVSKYGKLDIMYCNAGIPGDVPNNLVDVKNESFQRV 629
           S D ISFVHCDVT D+DVR LV+T ++K+GKLDIM+ N G+    P ++++  NE F+RV
Sbjct: 62  SPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRV 121

Query: 628 MNINTYGAYLGAKHAAKVMIPEKKGSIIFTASMSSVMGGLDVPHAYAASKHAVLGLTKNL 449
           M+IN YGA+L AKHAA+VMIP KKGSI+FTAS+SS   G  V H Y A+KHAVLGLT +L
Sbjct: 122 MDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSL 181

Query: 448 CVELGQHGIRVNCISPFVIASPMLTKVFGVEASLLEDLVCRAANLKGVVLKSEDVAQAAV 269
           C ELGQHGIRVNC+SP+V+ASP+LT VFGV++S +E+L  +AANLKG++L++EDVA A  
Sbjct: 182 CTELGQHGIRVNCVSPYVVASPLLTDVFGVDSSRVEELAHQAANLKGILLRAEDVADAVA 241

Query: 268 FLASEESRYVSGLNLLLDGGYTSTNAAFP-MIVHG 167
           +LA +ES+YVSGLNL++DGGYT TN AFP  + HG
Sbjct: 242 YLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHG 276


>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase
           gi|60594434|pdb|2BGK|B Chain B, X-Ray Structure Of
           Apo-Secoisolariciresinol Dehydrogenase
           gi|60594435|pdb|2BGL|A Chain A, X-Ray Structure Of
           Binary-Secoisolariciresinol Dehydrogenase
           gi|60594436|pdb|2BGM|A Chain A, X-Ray Structure Of
           Ternary-Secoisolariciresinol Dehydrogenase
           gi|13752456|gb|AAK38664.1| rhizome secoisolariciresinol
           dehydrogenase [Podophyllum peltatum]
           gi|89892039|gb|ABD78859.1| secoisolariciresinol
           dehydrogenase [Dysosma tsayuensis]
          Length = 278

 Score =  343 bits (881), Expect = 3e-92
 Identities = 167/275 (60%), Positives = 219/275 (79%), Gaps = 2/275 (0%)
 Frame = -2

Query: 985 GNSRVTTNISGRLEDKVAVITGGASGIGESTARLFVSHGAKVVIGDVQDDLGHTLCRDIG 806
           G++    + + RL+DKVA+ITGGA GIGE+TA+LFV +GAKVVI D+ DD G  +C +IG
Sbjct: 2   GSTSTPDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIG 61

Query: 805 S-DNISFVHCDVTNDDDVRTLVETAVSKYGKLDIMYCNAGIPGDVPNNLVDVKNESFQRV 629
           S D ISFVHCDVT D+DVR LV+T ++K+GKLDIM+ N G+    P ++++  NE F+RV
Sbjct: 62  SPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRV 121

Query: 628 MNINTYGAYLGAKHAAKVMIPEKKGSIIFTASMSSVMGGLDVPHAYAASKHAVLGLTKNL 449
           M+IN YGA+L AKHAA+VMIP KKGSI+FTAS+SS   G  V H Y A+KHAVLGLT +L
Sbjct: 122 MDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSL 181

Query: 448 CVELGQHGIRVNCISPFVIASPMLTKVFGVEASLLEDLVCRAANLKGVVLKSEDVAQAAV 269
           C ELG++GIRVNC+SP+++ASP+LT VFGV++S +E+L  +AANLKG +L++EDVA A  
Sbjct: 182 CTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVA 241

Query: 268 FLASEESRYVSGLNLLLDGGYTSTNAAFP-MIVHG 167
           +LA +ES+YVSGLNL++DGGYT TN AFP  + HG
Sbjct: 242 YLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHG 276


>gb|ACB87357.1| secoisolariciresinol dehydrogenase [Dysosma versipellis]
          Length = 278

 Score =  339 bits (870), Expect = 6e-91
 Identities = 165/275 (60%), Positives = 218/275 (79%), Gaps = 2/275 (0%)
 Frame = -2

Query: 985 GNSRVTTNISGRLEDKVAVITGGASGIGESTARLFVSHGAKVVIGDVQDDLGHTLCRDIG 806
           G +  + + + RL+DKVA+ITGGA GIGE+TA+LFV +GAKVVI D+ DD G  +C++IG
Sbjct: 2   GFTSTSASSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADISDDHGQKVCKNIG 61

Query: 805 S-DNISFVHCDVTNDDDVRTLVETAVSKYGKLDIMYCNAGIPGDVPNNLVDVKNESFQRV 629
           S D ISFVHCDVT D+DVR LV+  ++K+GKLDIM+ N G+ G  P ++++  NE F+RV
Sbjct: 62  SPDVISFVHCDVTEDEDVRNLVDATIAKHGKLDIMFGNVGVLGTTPYSILEAGNEDFKRV 121

Query: 628 MNINTYGAYLGAKHAAKVMIPEKKGSIIFTASMSSVMGGLDVPHAYAASKHAVLGLTKNL 449
           M+IN YGA+L AKHAA+VMIP KKGSI+ TAS+SS   G  V H Y A+KHAVLGLT +L
Sbjct: 122 MDINVYGAFLVAKHAARVMIPAKKGSIVSTASISSFTAGEGVSHVYTATKHAVLGLTTSL 181

Query: 448 CVELGQHGIRVNCISPFVIASPMLTKVFGVEASLLEDLVCRAANLKGVVLKSEDVAQAAV 269
           C ELGQ+G+RVNC+SP+++ASP+LT VF V++S +E+L  +AANLKG +L++EDVA A  
Sbjct: 182 CTELGQYGVRVNCVSPYIVASPLLTDVFRVDSSRVEELAHQAANLKGTLLRAEDVADAVA 241

Query: 268 FLASEESRYVSGLNLLLDGGYTSTNAAFP-MIVHG 167
           +LA +ES+YVSGLNL++DGGYT TN AFP  + HG
Sbjct: 242 YLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHG 276


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