BLASTX nr result

ID: Coptis24_contig00018549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018549
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFM93780.1| plastid 2-C-methyl-D-erythritol 4-phosphate cytid...   201   4e-50
dbj|BAF98292.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltra...   201   4e-50
dbj|BAF98291.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltra...   199   1e-49
gb|ABV02019.1| 2-C-methyl-D-erythritol 4-phosphate cytidyltransf...   199   2e-49
ref|XP_002268908.1| PREDICTED: 2-C-methyl-D-erythritol 4-phospha...   198   3e-49

>gb|AFM93780.1| plastid 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
           [Picrorhiza kurrooa]
          Length = 311

 Score =  201 bits (512), Expect = 4e-50
 Identities = 100/126 (79%), Positives = 114/126 (90%), Gaps = 3/126 (2%)
 Frame = +1

Query: 1   SFYTFSRMVQVKEIVVVCDPSYKDIFEDARDNIKVELKFALPGKERRDSVFNGFQAIDDN 180
           SFYTFS+M +VKEIVVVCDPSY+DIFEDA+DNI+V+LKFALPGKER+DSV++G +AID N
Sbjct: 121 SFYTFSKMPEVKEIVVVCDPSYQDIFEDAKDNIQVDLKFALPGKERQDSVYSGLEAIDSN 180

Query: 181 SELVCIHDSARPLVSTEDIEKVLDDGWLNGAAVLGVPAKATIKEANNES---RTLDRKTL 351
           SELVC+HDSARPLV TED+ KVL DGWL GAAV+GVPAKATIKEAN ES   +TLDRKTL
Sbjct: 181 SELVCVHDSARPLVLTEDVAKVLKDGWLIGAAVVGVPAKATIKEANTESFVVKTLDRKTL 240

Query: 352 *EMQTP 369
            EMQTP
Sbjct: 241 WEMQTP 246


>dbj|BAF98292.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Hevea
           brasiliensis]
          Length = 311

 Score =  201 bits (512), Expect = 4e-50
 Identities = 97/126 (76%), Positives = 116/126 (92%), Gaps = 3/126 (2%)
 Frame = +1

Query: 1   SFYTFSRMVQVKEIVVVCDPSYKDIFEDARDNIKVELKFALPGKERRDSVFNGFQAIDDN 180
           SFYTFS+M++VKEIVVVCDPSY+DIFEDA++NI V+LKFALPGKER+DSV++G Q +D N
Sbjct: 116 SFYTFSKMIEVKEIVVVCDPSYQDIFEDAKENINVDLKFALPGKERQDSVYSGLQEVDLN 175

Query: 181 SELVCIHDSARPLVSTEDIEKVLDDGWLNGAAVLGVPAKATIKEANNES---RTLDRKTL 351
           SELVC+HDSARPLVS+ D++KV++D W+NGAAVLGVPAKATIKEAN+ES   RTLDRKTL
Sbjct: 176 SELVCVHDSARPLVSSADVKKVIEDAWINGAAVLGVPAKATIKEANSESFVVRTLDRKTL 235

Query: 352 *EMQTP 369
            EMQTP
Sbjct: 236 WEMQTP 241


>dbj|BAF98291.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Hevea
           brasiliensis]
          Length = 311

 Score =  199 bits (507), Expect = 1e-49
 Identities = 96/126 (76%), Positives = 115/126 (91%), Gaps = 3/126 (2%)
 Frame = +1

Query: 1   SFYTFSRMVQVKEIVVVCDPSYKDIFEDARDNIKVELKFALPGKERRDSVFNGFQAIDDN 180
           SFYTFS+M++VKEIVVVCDPSY+DIFEDA++NI V+LKFALPGKER+DSV++G   +D N
Sbjct: 116 SFYTFSKMIEVKEIVVVCDPSYQDIFEDAKENINVDLKFALPGKERQDSVYSGLHEVDLN 175

Query: 181 SELVCIHDSARPLVSTEDIEKVLDDGWLNGAAVLGVPAKATIKEANNES---RTLDRKTL 351
           SELVC+HDSARPLVS+ D++KV++D W+NGAAVLGVPAKATIKEAN+ES   RTLDRKTL
Sbjct: 176 SELVCVHDSARPLVSSADVKKVIEDAWINGAAVLGVPAKATIKEANSESFVVRTLDRKTL 235

Query: 352 *EMQTP 369
            EMQTP
Sbjct: 236 WEMQTP 241


>gb|ABV02019.1| 2-C-methyl-D-erythritol 4-phosphate cytidyltransferase [Nicotiana
           langsdorffii x Nicotiana sanderae]
          Length = 306

 Score =  199 bits (506), Expect = 2e-49
 Identities = 102/133 (76%), Positives = 118/133 (88%), Gaps = 3/133 (2%)
 Frame = +1

Query: 1   SFYTFSRMVQVKEIVVVCDPSYKDIFEDARDNIKVELKFALPGKERRDSVFNGFQAIDDN 180
           SF+TFSRM QVKEI+VVCDPSY+DIFEDA++NI+VELKFALPGKER+DSV++G Q +D  
Sbjct: 118 SFFTFSRMPQVKEIIVVCDPSYQDIFEDAKENIQVELKFALPGKERQDSVYSGLQEVDSI 177

Query: 181 SELVCIHDSARPLVSTEDIEKVLDDGWLNGAAVLGVPAKATIKEANNES---RTLDRKTL 351
           S+LVCIHDSARPLV TEDIEKVL DGW+ GAAVLGVPAKATIKEAN+ES   +TLDRKTL
Sbjct: 178 SKLVCIHDSARPLVWTEDIEKVLKDGWVVGAAVLGVPAKATIKEANSESFVVKTLDRKTL 237

Query: 352 *EMQTP*VNEQKL 390
            EMQTP V + +L
Sbjct: 238 WEMQTPQVIKPEL 250


>ref|XP_002268908.1| PREDICTED: 2-C-methyl-D-erythritol 4-phosphate
           cytidylyltransferase, chloroplastic [Vitis vinifera]
           gi|297739442|emb|CBI29624.3| unnamed protein product
           [Vitis vinifera]
          Length = 308

 Score =  198 bits (504), Expect = 3e-49
 Identities = 103/133 (77%), Positives = 116/133 (87%), Gaps = 3/133 (2%)
 Frame = +1

Query: 1   SFYTFSRMVQVKEIVVVCDPSYKDIFEDARDNIKVELKFALPGKERRDSVFNGFQAIDDN 180
           SFYTFSRM  VKEIVVVCDPSYKDIFEDA++NI +++KF LPGKER+DSV++G QA+D N
Sbjct: 115 SFYTFSRMSAVKEIVVVCDPSYKDIFEDAKENIHIDVKFTLPGKERQDSVYSGLQAVDLN 174

Query: 181 SELVCIHDSARPLVSTEDIEKVLDDGWLNGAAVLGVPAKATIKEANNES---RTLDRKTL 351
           SELVCIHDSARPLVST DIE+VL DG LNGAAVLGVP KATIKEAN+ES   RTLDRKTL
Sbjct: 175 SELVCIHDSARPLVSTGDIEQVLKDGQLNGAAVLGVPVKATIKEANSESFVVRTLDRKTL 234

Query: 352 *EMQTP*VNEQKL 390
            EMQTP V + +L
Sbjct: 235 WEMQTPQVIKPEL 247


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