BLASTX nr result
ID: Coptis24_contig00018543
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00018543 (402 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCD74499.1| tetratricopeptide repeat domain-containing prote... 85 7e-15 ref|XP_002318949.1| predicted protein [Populus trichocarpa] gi|2... 84 2e-14 ref|XP_002512513.1| hypothetical protein RCOM_1435290 [Ricinus c... 83 2e-14 ref|XP_002330255.1| predicted protein [Populus trichocarpa] gi|2... 83 3e-14 ref|NP_176039.2| tetratricopeptide repeat domain-containing prot... 82 3e-14 >emb|CCD74499.1| tetratricopeptide repeat domain-containing protein [Arabidopsis halleri subsp. halleri] Length = 456 Score = 84.7 bits (208), Expect = 7e-15 Identities = 35/66 (53%), Positives = 53/66 (80%) Frame = +2 Query: 2 FREETELAVRYLDNLAKVPRFDLLIMCLSATDKSDLHRMWEENFLSNELPVEFVETLGKL 181 F E+ +LAV+Y++NL KVPRF++L+MCL++T+KS+L ++WE+ F S P+E+ E L KL Sbjct: 389 FTEDMDLAVKYIENLTKVPRFNMLVMCLTSTEKSELLKLWEDVFCSKATPMEYAELLDKL 448 Query: 182 RMKYCL 199 R +YCL Sbjct: 449 RSRYCL 454 >ref|XP_002318949.1| predicted protein [Populus trichocarpa] gi|222857325|gb|EEE94872.1| predicted protein [Populus trichocarpa] Length = 471 Score = 83.6 bits (205), Expect = 2e-14 Identities = 35/65 (53%), Positives = 51/65 (78%) Frame = +2 Query: 2 FREETELAVRYLDNLAKVPRFDLLIMCLSATDKSDLHRMWEENFLSNELPVEFVETLGKL 181 F ++ +LAV+YL+NL +VPRFD+LIMCL +TDK+DL +MW+E F S P+++ E L K+ Sbjct: 405 FIDDMDLAVKYLENLTEVPRFDILIMCLPSTDKADLLKMWDEVFCSEATPIKYAEILDKM 464 Query: 182 RMKYC 196 R +YC Sbjct: 465 RSRYC 469 >ref|XP_002512513.1| hypothetical protein RCOM_1435290 [Ricinus communis] gi|223548474|gb|EEF49965.1| hypothetical protein RCOM_1435290 [Ricinus communis] Length = 237 Score = 83.2 bits (204), Expect = 2e-14 Identities = 38/66 (57%), Positives = 49/66 (74%) Frame = +2 Query: 2 FREETELAVRYLDNLAKVPRFDLLIMCLSATDKSDLHRMWEENFLSNELPVEFVETLGKL 181 F ++ LAV+YL NLA+VPRF++LIMCLSA DK+DL ++W+E F S P+E E L L Sbjct: 171 FVDDMNLAVKYLQNLAQVPRFNILIMCLSAADKADLLKLWDEVFCSEATPIEHAEILDNL 230 Query: 182 RMKYCL 199 R KYCL Sbjct: 231 RTKYCL 236 >ref|XP_002330255.1| predicted protein [Populus trichocarpa] gi|222871711|gb|EEF08842.1| predicted protein [Populus trichocarpa] Length = 434 Score = 82.8 bits (203), Expect = 3e-14 Identities = 37/65 (56%), Positives = 48/65 (73%) Frame = +2 Query: 2 FREETELAVRYLDNLAKVPRFDLLIMCLSATDKSDLHRMWEENFLSNELPVEFVETLGKL 181 F ++ + AV+YL+NL KVPRFD+LIMCLS+TD SDL +MW+ F S P+E+ E L L Sbjct: 367 FIDDMDFAVKYLENLTKVPRFDMLIMCLSSTDTSDLLKMWDGVFCSASTPIEYAEILDNL 426 Query: 182 RMKYC 196 R KYC Sbjct: 427 RSKYC 431 >ref|NP_176039.2| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gi|53828529|gb|AAU94374.1| At1g56440 [Arabidopsis thaliana] gi|59958350|gb|AAX12885.1| At1g56440 [Arabidopsis thaliana] gi|110743110|dbj|BAE99447.1| hypothetical protein [Arabidopsis thaliana] gi|332195274|gb|AEE33395.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] Length = 476 Score = 82.4 bits (202), Expect = 3e-14 Identities = 33/66 (50%), Positives = 53/66 (80%) Frame = +2 Query: 2 FREETELAVRYLDNLAKVPRFDLLIMCLSATDKSDLHRMWEENFLSNELPVEFVETLGKL 181 F E+ +LAV+Y++NL KVPRF++L+MCL++T+K++L ++WE+ F + P+E+ E L KL Sbjct: 409 FTEDMDLAVKYIENLTKVPRFNMLVMCLTSTEKNELLKIWEDVFCNKATPMEYAEVLDKL 468 Query: 182 RMKYCL 199 R +YCL Sbjct: 469 RSRYCL 474