BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018533
         (1123 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531130.1| nucleolar complex protein, putative [Ricinus...   389   e-106
ref|XP_002313577.1| predicted protein [Populus trichocarpa] gi|2...   388   e-105
ref|XP_003544990.1| PREDICTED: nucleolar complex protein 4 homol...   372   e-100
ref|XP_003519333.1| PREDICTED: nucleolar complex protein 4 homol...   371   e-100
ref|XP_004161032.1| PREDICTED: nucleolar complex protein 4 homol...   365   8e-99

>ref|XP_002531130.1| nucleolar complex protein, putative [Ricinus communis]
            gi|223529279|gb|EEF31250.1| nucleolar complex protein,
            putative [Ricinus communis]
          Length = 652

 Score =  389 bits (999), Expect = e-106
 Identities = 199/298 (66%), Positives = 228/298 (76%), Gaps = 1/298 (0%)
 Frame = +2

Query: 2    SSPIMLCDFLTRSYDVGGVTSVMALSSLYILMTQHGLEYPNFYEKLYALLEPSIFMAKHR 181
            S+P+MLCDFLTRSYD+GGV SVMALSSL+ILMTQHGLEYPNFYEKLYALL PS+FMAKHR
Sbjct: 357  SNPLMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLLPSVFMAKHR 416

Query: 182  AKFFELLDSCLKSPLLPAYLAAAFTKKLSRLSLVVPPSGALVVIAIIHNLLRRHPSINFL 361
            +KFF+LLDSCLKSPLLPAYLAAAF K+LSRL+L  PPSG +V+IA+IHNLLRRHPSIN L
Sbjct: 417  SKFFQLLDSCLKSPLLPAYLAAAFAKRLSRLALTAPPSGGVVIIALIHNLLRRHPSINCL 476

Query: 362  VQQQN-DETDGDXXXXXXXXXXXVKESDACTDISTAKPGIDMFNSEETDPAKSNAMRSSL 538
            V +++ +E+  D              S   +  S  KPGID FN+EE  P KS+A+RSSL
Sbjct: 477  VHREDGNESAADNSKAKGEDAGDANNSRNGSHASARKPGIDRFNNEECSPIKSSALRSSL 536

Query: 539  WEIDTLRHHYCPAVSRFVASLENDLTVRAKTTEITVKDFSSASYATIFRAEIGRRIKQVP 718
            WEIDTL HHYCP VSRFV SLENDLTVR KTTE+ + DFSS+SYATIF  E+ RR+KQVP
Sbjct: 537  WEIDTLSHHYCPPVSRFVLSLENDLTVRKKTTEVNINDFSSSSYATIFEEELRRRVKQVP 596

Query: 719  LAFYKASPASLFSESDFPGWSFKLVDXXXXXXXXXXXXXXTKSVEADEKSTKRQRIEC 892
            LAF+KA+P SLFSESDF GW+FK                  KS E D   TKRQRIEC
Sbjct: 597  LAFFKATPTSLFSESDFAGWTFK---YEQSKRNDAVNGTSDKSEENDCSPTKRQRIEC 651


>ref|XP_002313577.1| predicted protein [Populus trichocarpa] gi|222849985|gb|EEE87532.1|
            predicted protein [Populus trichocarpa]
          Length = 575

 Score =  388 bits (996), Expect = e-105
 Identities = 198/264 (75%), Positives = 222/264 (84%), Gaps = 2/264 (0%)
 Frame = +2

Query: 2    SSPIMLCDFLTRSYDVGGVTSVMALSSLYILMTQHGLEYPNFYEKLYALLEPSIFMAKHR 181
            S+PIMLCDFLTRSYD+GGV SVMALSSL+ILMT+HGLEYPNFYEKLY LL PSIFMAKHR
Sbjct: 311  SNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTKHGLEYPNFYEKLYVLLLPSIFMAKHR 370

Query: 182  AKFFELLDSCLKSPLLPAYLAAAFTKKLSRLSLVVPPSGALVVIAIIHNLLRRHPSINFL 361
            AKFF+LLDSCLKSPLLPAYLAAAF KKLSRL+LVVPPSGALV+IA+IHNLLRRHPSIN L
Sbjct: 371  AKFFQLLDSCLKSPLLPAYLAAAFAKKLSRLALVVPPSGALVIIALIHNLLRRHPSINCL 430

Query: 362  VQQQ--NDETDGDXXXXXXXXXXXVKESDACTDISTAKPGIDMFNSEETDPAKSNAMRSS 535
            V Q+  ND TD +             E  A T+I+  K GID F++EE++P KS+A+ SS
Sbjct: 431  VHQEDCNDTTDNNSEAEGGDNE---NEFGASTNIAARKAGIDHFDNEESNPLKSHALGSS 487

Query: 536  LWEIDTLRHHYCPAVSRFVASLENDLTVRAKTTEITVKDFSSASYATIFRAEIGRRIKQV 715
            LWEID+LRHHYCP VSRFV SLENDLTVRAKTTE+ V+DFSS SYATIF  EI RR+KQV
Sbjct: 488  LWEIDSLRHHYCPPVSRFVQSLENDLTVRAKTTEVNVEDFSSGSYATIFGEEIRRRVKQV 547

Query: 716  PLAFYKASPASLFSESDFPGWSFK 787
            P+AFYKA P SLFSE+DF GWSFK
Sbjct: 548  PVAFYKAIPTSLFSETDFSGWSFK 571


>ref|XP_003544990.1| PREDICTED: nucleolar complex protein 4 homolog [Glycine max]
          Length = 600

 Score =  372 bits (954), Expect = e-100
 Identities = 185/262 (70%), Positives = 212/262 (80%)
 Frame = +2

Query: 2    SSPIMLCDFLTRSYDVGGVTSVMALSSLYILMTQHGLEYPNFYEKLYALLEPSIFMAKHR 181
            S+PIMLCDFLTRSYDVGGV SVMALSSL++LMTQ+GLEYPNFYEKLYALL PSIFMAKHR
Sbjct: 320  SNPIMLCDFLTRSYDVGGVVSVMALSSLFVLMTQYGLEYPNFYEKLYALLVPSIFMAKHR 379

Query: 182  AKFFELLDSCLKSPLLPAYLAAAFTKKLSRLSLVVPPSGALVVIAIIHNLLRRHPSINFL 361
            A+FF+LLDSCLKSPLLPAYLAA+F KKLSRL L VPPSGALV+ A+IHN+LRRHPSIN L
Sbjct: 380  ARFFQLLDSCLKSPLLPAYLAASFAKKLSRLLLSVPPSGALVITALIHNILRRHPSINCL 439

Query: 362  VQQQNDETDGDXXXXXXXXXXXVKESDACTDISTAKPGIDMFNSEETDPAKSNAMRSSLW 541
            V +++   +G              ++     + + K GID FNS ETDP KS AMRSSLW
Sbjct: 440  VHREDGVDEGKGDHRTDEGMATNSDNAKTVAMPSQKSGIDHFNSSETDPKKSGAMRSSLW 499

Query: 542  EIDTLRHHYCPAVSRFVASLENDLTVRAKTTEITVKDFSSASYATIFRAEIGRRIKQVPL 721
            EIDT+ HHYCP  SRF  SL NDLTVRAKTTE+ V DFS+ SYATI  AEI RR+KQVPL
Sbjct: 500  EIDTILHHYCPPASRFALSLGNDLTVRAKTTEVNVGDFSAGSYATILGAEISRRVKQVPL 559

Query: 722  AFYKASPASLFSESDFPGWSFK 787
            AF+KA+P+SLFSE+DF GW+FK
Sbjct: 560  AFFKATPSSLFSETDFAGWTFK 581


>ref|XP_003519333.1| PREDICTED: nucleolar complex protein 4 homolog [Glycine max]
          Length = 581

 Score =  371 bits (953), Expect = e-100
 Identities = 189/264 (71%), Positives = 215/264 (81%), Gaps = 2/264 (0%)
 Frame = +2

Query: 2    SSPIMLCDFLTRSYDVGGVTSVMALSSLYILMTQHGLEYPNFYEKLYALLEPSIFMAKHR 181
            S+PI+LCDFLTRSYDVGGV SVMALSSL++LMTQ+GLEYPNFY+KLYALL PSIFMAKHR
Sbjct: 311  SNPIILCDFLTRSYDVGGVVSVMALSSLFVLMTQYGLEYPNFYDKLYALLVPSIFMAKHR 370

Query: 182  AKFFELLDSCLKSPLLPAYLAAAFTKKLSRLSLVVPPSGALVVIAIIHNLLRRHPSINFL 361
            A+FF+LLDSCLKSPLLPAYLAA+F KKLSRL L VPPSGALV+ A+IHNLLRRHPSIN L
Sbjct: 371  ARFFQLLDSCLKSPLLPAYLAASFAKKLSRLLLSVPPSGALVITALIHNLLRRHPSINCL 430

Query: 362  VQQQN--DETDGDXXXXXXXXXXXVKESDACTDISTAKPGIDMFNSEETDPAKSNAMRSS 535
            V +++  DE  GD               +A T + + K GID FNS ETDP KS AMRSS
Sbjct: 431  VHREDGVDEGKGD-------EGMATNSDNAKTAMPSQKSGIDHFNSSETDPKKSGAMRSS 483

Query: 536  LWEIDTLRHHYCPAVSRFVASLENDLTVRAKTTEITVKDFSSASYATIFRAEIGRRIKQV 715
            LWEIDT+ HHYCP  SRF  SL NDLTVRAKTTE+ V DFS+ SYATI  AEI RR+KQV
Sbjct: 484  LWEIDTILHHYCPPASRFALSLGNDLTVRAKTTEVNVGDFSAGSYATILGAEISRRVKQV 543

Query: 716  PLAFYKASPASLFSESDFPGWSFK 787
            PLAF+KA+P+SLFSE+DF GW+FK
Sbjct: 544  PLAFFKATPSSLFSETDFAGWTFK 567


>ref|XP_004161032.1| PREDICTED: nucleolar complex protein 4 homolog B-like [Cucumis
            sativus]
          Length = 608

 Score =  365 bits (938), Expect = 8e-99
 Identities = 195/297 (65%), Positives = 227/297 (76%), Gaps = 2/297 (0%)
 Frame = +2

Query: 2    SSPIMLCDFLTRSYDVGGVTSVMALSSLYILMTQHGLEYPNFYEKLYALLEPSIFMAKHR 181
            S PI+L DFLT+SYD+GGV SVMALSSL++LMT++GLEYPNFYEKLYALL PSIFMAKHR
Sbjct: 328  SKPIILSDFLTKSYDIGGVISVMALSSLFLLMTKYGLEYPNFYEKLYALLVPSIFMAKHR 387

Query: 182  AKFFELLDSCLKSPLLPAYLAAAFTKKLSRLSLVVPPSGALVVIAIIHNLLRRHPSINFL 361
            AKFF+LLDSCLKSPLLPAYLAAAF KKLSRLSLVVPPSGALV+IA+IHNLLRRHPSIN L
Sbjct: 388  AKFFQLLDSCLKSPLLPAYLAAAFAKKLSRLSLVVPPSGALVIIALIHNLLRRHPSINCL 447

Query: 362  VQQQN-DETDGDXXXXXXXXXXXVKESDACTDISTAKPGIDMFNSEETDPAKSNAMRSSL 538
            V ++N  E+  D            K +DA  D    KPGID FN EE DP KS+A+RSSL
Sbjct: 448  VHRENVSESKND----NSTSEEAAKGTDA--DTPKMKPGIDHFNYEEADPIKSSALRSSL 501

Query: 539  WEIDTLRHHYCPAVSRFVASLENDLTVRAKTTEITVKDFSSASYATIFRAEIGRRIKQVP 718
            WEID+LRHHYCP VSR V SLENDLTVR+KTTEI VKDF + SY+TI   E+ +++K+VP
Sbjct: 502  WEIDSLRHHYCPPVSRLVLSLENDLTVRSKTTEIDVKDFVAGSYSTILGQELKKKLKRVP 561

Query: 719  LAFYKASPASLFSESDFPGWSFKLVDXXXXXXXXXXXXXXTKSVE-ADEKSTKRQRI 886
            LAFY+A P +LFSESDF GWSF                   K+++ +D  S KRQR+
Sbjct: 562  LAFYQAPPTTLFSESDFAGWSF-------------DNEHSEKNIDSSDHLSAKRQRV 605