BLASTX nr result

ID: Coptis24_contig00018512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018512
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314403.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_003631978.1| PREDICTED: uncharacterized protein LOC100855...   111   7e-23
ref|XP_002516863.1| conserved hypothetical protein [Ricinus comm...   110   2e-22
ref|XP_003630266.1| hypothetical protein MTR_8g093650 [Medicago ...    92   4e-17
ref|XP_003546102.1| PREDICTED: uncharacterized protein LOC100816...    91   2e-16

>ref|XP_002314403.1| predicted protein [Populus trichocarpa] gi|222863443|gb|EEF00574.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  118 bits (296), Expect = 6e-25
 Identities = 75/185 (40%), Positives = 112/185 (60%)
 Frame = -2

Query: 561 EAVHGVTRNNGLNYVKASTSPPLPLATKMYHSQRNHRLRCALKHLYHEASMKEHTSDPMS 382
           E   G+T+      V  ST  P PLA K+Y+SQRN RLR A+ +LYH  S +    + ++
Sbjct: 41  ETASGLTKVTST--VDPSTYIPAPLAAKVYYSQRNTRLRSAVAYLYHATSAEG--LNMVN 96

Query: 381 PKLVQENVMLSSQVSLPKDLLHDSQSDEFLQKKQDTCSLVTVREHDQILAQSSDLCLGNS 202
            +L QE++M     S    L  D+Q+++ + +K D     +V + D+ILAQSS++CL NS
Sbjct: 97  SELPQESIMQLLASSQKGSL--DAQTNDLINEKGDP----SVHQPDEILAQSSEMCLNNS 150

Query: 201 RGYPSAVDFAGKFRDNSFPRPAPSVETATMGKMRSRYLSTTYSYPGNSGTPLGTMQQQNG 22
            G P   +F+ +   ++  RP    +TA++G +RS+YLS  YS+ GNSG  LGTMQQ NG
Sbjct: 151 GGCPPLTNFSNQSPVDNILRP----QTASVGMLRSKYLSKPYSFAGNSGQSLGTMQQPNG 206

Query: 21  SVHVV 7
           +V V+
Sbjct: 207 TVPVL 211


>ref|XP_003631978.1| PREDICTED: uncharacterized protein LOC100855402 [Vitis vinifera]
          Length = 339

 Score =  111 bits (278), Expect = 7e-23
 Identities = 66/163 (40%), Positives = 89/163 (54%)
 Frame = -2

Query: 498 PLPLATKMYHSQRNHRLRCALKHLYHEASMKEHTSDPMSPKLVQENVMLSSQVSLPKDLL 319
           P+PLATKMY+SQRNHRLR A+ HLY  AS + H SD                        
Sbjct: 215 PVPLATKMYYSQRNHRLRSAISHLYFAASNEGHCSD------------------------ 250

Query: 318 HDSQSDEFLQKKQDTCSLVTVREHDQILAQSSDLCLGNSRGYPSAVDFAGKFRDNSFPRP 139
                       +DT  L +++  D++L QSS++ LG S G P A++F+ +   N+  RP
Sbjct: 251 -----------MRDTHFLPSMQNPDKVLVQSSEVFLGKSEGCPPAMNFSNQVHVNNVLRP 299

Query: 138 APSVETATMGKMRSRYLSTTYSYPGNSGTPLGTMQQQNGSVHV 10
                 A +G ++S+YLS  YS+  NSGTPLGT+QQ NGSV V
Sbjct: 300 ----HAAPVGTIKSKYLSKPYSFASNSGTPLGTIQQPNGSVSV 338


>ref|XP_002516863.1| conserved hypothetical protein [Ricinus communis]
           gi|223543951|gb|EEF45477.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 407

 Score =  110 bits (275), Expect = 2e-22
 Identities = 71/185 (38%), Positives = 108/185 (58%)
 Frame = -2

Query: 561 EAVHGVTRNNGLNYVKASTSPPLPLATKMYHSQRNHRLRCALKHLYHEASMKEHTSDPMS 382
           EA  G+T+   ++     T  P PLATK+Y+SQRN+RLR A+  +YH AS K   S+  S
Sbjct: 235 EAASGLTKI--ISTQDTFTYVPAPLATKIYYSQRNNRLRSAIASMYHSASAKGLGSNVRS 292

Query: 381 PKLVQENVMLSSQVSLPKDLLHDSQSDEFLQKKQDTCSLVTVREHDQILAQSSDLCLGNS 202
           P++ QEN  +  Q S  +  LH+   D F +++          + DQ+L+QSS++CL  S
Sbjct: 293 PEVSQEN-SIQLQASPHQGGLHEPVDDLFNKERG-----AYACKPDQVLSQSSEVCLDKS 346

Query: 201 RGYPSAVDFAGKFRDNSFPRPAPSVETATMGKMRSRYLSTTYSYPGNSGTPLGTMQQQNG 22
            G   A +F+ +F  ++   P P    A +G +R++Y+   YS+ GNSG  LGT+QQ +G
Sbjct: 347 GGCIPASNFSSQFAVDNILSPQP----APVGLLRTKYIPKPYSFAGNSGQSLGTVQQPSG 402

Query: 21  SVHVV 7
           SV V+
Sbjct: 403 SVPVL 407


>ref|XP_003630266.1| hypothetical protein MTR_8g093650 [Medicago truncatula]
           gi|355524288|gb|AET04742.1| hypothetical protein
           MTR_8g093650 [Medicago truncatula]
          Length = 397

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 57/164 (34%), Positives = 87/164 (53%)
 Frame = -2

Query: 498 PLPLATKMYHSQRNHRLRCALKHLYHEASMKEHTSDPMSPKLVQENVMLSSQVSLPKDLL 319
           P PLATK+Y+SQR +RLR A++H+Y E   +E  +D    K     ++     SL     
Sbjct: 241 PAPLATKIYYSQRTNRLRAAIRHMYFENLNEELCTDVAGQKTSPGEIVALQDSSLGDPSF 300

Query: 318 HDSQSDEFLQKKQDTCSLVTVREHDQILAQSSDLCLGNSRGYPSAVDFAGKFRDNSFPRP 139
              Q +  L K+  +  L + ++ D + A+SS++CL  + G PS V  + +F  ++  R 
Sbjct: 301 --QQMNNVLNKESHSAMLYSTQKSDHVPAKSSEVCLLKAGGVPS-VGLSDQFVLDNVSRS 357

Query: 138 APSVETATMGKMRSRYLSTTYSYPGNSGTPLGTMQQQNGSVHVV 7
           A       +G  R  +L   YS+  N+G PLGTMQQ  GSV V+
Sbjct: 358 A----ATNVGLTRGNFLPKAYSFASNTGNPLGTMQQTKGSVPVI 397


>ref|XP_003546102.1| PREDICTED: uncharacterized protein LOC100816000 [Glycine max]
          Length = 241

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 62/165 (37%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
 Frame = -2

Query: 498 PLPLATKMYHSQRNHRLRCALKHLYHEASMKEHTSDPMSPKLVQENVMLSSQVSLPKDLL 319
           P PLATK+Y+SQR +RLR  ++HLY +    +  +D + PK      M   Q S P+D  
Sbjct: 92  PAPLATKIYYSQRTNRLRARIRHLYFQDLNGQCCTDVVCPKTSHAE-MAVLQDSSPRDPS 150

Query: 318 HDSQSDEFLQKKQDTCSLVTVREHDQILAQSSDLCLGNSRGYPSAVDFAGKFRDNSFPRP 139
            D  ++    +       +  ++ D ILA+SS++ L  + G PS+   + +F DN     
Sbjct: 151 FDQMNNVHEGR-------LPAQKSDHILAKSSEIGLLKAGGLPSS-GLSNQFLDNV---- 198

Query: 138 APSVETATMGKM-RSRYLSTTYSYPGNSGTPLGTMQQQNGSVHVV 7
             S   AT G + RS +L T+YS+  N+G+PLGTMQQ NGSV V+
Sbjct: 199 --SRSAATYGGLTRSNFLPTSYSFGSNTGSPLGTMQQPNGSVPVI 241


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