BLASTX nr result

ID: Coptis24_contig00018507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018507
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519709.1| conserved hypothetical protein [Ricinus comm...   285   7e-75
ref|XP_002317295.1| predicted protein [Populus trichocarpa] gi|2...   285   7e-75
gb|AFK44138.1| unknown [Medicago truncatula]                          272   5e-71
ref|XP_004162606.1| PREDICTED: uncharacterized protein ycf23-lik...   271   1e-70
ref|XP_004134587.1| PREDICTED: uncharacterized protein ycf23-lik...   271   1e-70

>ref|XP_002519709.1| conserved hypothetical protein [Ricinus communis]
           gi|223541126|gb|EEF42682.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 361

 Score =  285 bits (729), Expect = 7e-75
 Identities = 147/182 (80%), Positives = 159/182 (87%)
 Frame = +1

Query: 4   TLTSLPICVSSVNPKAFLAAVDAGAQMVEIGNYDSFYEKGVYFSPEEILKMTKETKRILP 183
           +LTSLP+CVSSV+P AFLAAV+AGAQMVEIGNYDSFY+KG+ FSPE+IL +TKETKRILP
Sbjct: 164 SLTSLPVCVSSVDPAAFLAAVEAGAQMVEIGNYDSFYDKGIVFSPEQILSLTKETKRILP 223

Query: 184 SVVLSVTVPHMLGLPDQVKLAELLEQEGVDIIQTEGGKCSNPSKSGVLGLIEKASPTLAA 363
           SV LSVTVPH L LPDQVKLAE LEQEG DIIQTEGGKCSNPSKSGVLGLIEKA+PTLAA
Sbjct: 224 SVTLSVTVPHTLALPDQVKLAERLEQEGADIIQTEGGKCSNPSKSGVLGLIEKATPTLAA 283

Query: 364 AYSISRAVRIPVMCSSGLSSVTAPMALXXXXXXXXXXXXXNKLNDVVVMIAEVRSIADSL 543
           AYSISRAV+IPVMCSSGLS+VTAPMA+             NKLNDVV MIAEVRSIADS 
Sbjct: 284 AYSISRAVKIPVMCSSGLSAVTAPMAIIAGASGVGVGSAVNKLNDVVAMIAEVRSIADSF 343

Query: 544 GL 549
           GL
Sbjct: 344 GL 345


>ref|XP_002317295.1| predicted protein [Populus trichocarpa] gi|222860360|gb|EEE97907.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  285 bits (729), Expect = 7e-75
 Identities = 147/180 (81%), Positives = 160/180 (88%)
 Frame = +1

Query: 7   LTSLPICVSSVNPKAFLAAVDAGAQMVEIGNYDSFYEKGVYFSPEEILKMTKETKRILPS 186
           LTSLP+CVSSV P+AFLAAV+AGAQMVEIGNYDSFY++GV FSPE+IL +TKETKRILPS
Sbjct: 109 LTSLPVCVSSVEPRAFLAAVEAGAQMVEIGNYDSFYDQGVVFSPEKILNLTKETKRILPS 168

Query: 187 VVLSVTVPHMLGLPDQVKLAELLEQEGVDIIQTEGGKCSNPSKSGVLGLIEKASPTLAAA 366
           V LSVTVPH L LPDQVKLAELLEQEGVDIIQTEGGKCSNPSKSGVLGLIEKA+P+LAAA
Sbjct: 169 VTLSVTVPHTLSLPDQVKLAELLEQEGVDIIQTEGGKCSNPSKSGVLGLIEKATPSLAAA 228

Query: 367 YSISRAVRIPVMCSSGLSSVTAPMALXXXXXXXXXXXXXNKLNDVVVMIAEVRSIADSLG 546
           YSISRAV+IPVMCSSGLS+VTAPMA+             N+LNDVV MIAEVRSIADSLG
Sbjct: 229 YSISRAVKIPVMCSSGLSAVTAPMAITAGAAGVGVGSAINRLNDVVAMIAEVRSIADSLG 288


>gb|AFK44138.1| unknown [Medicago truncatula]
          Length = 307

 Score =  272 bits (696), Expect = 5e-71
 Identities = 142/180 (78%), Positives = 155/180 (86%)
 Frame = +1

Query: 4   TLTSLPICVSSVNPKAFLAAVDAGAQMVEIGNYDSFYEKGVYFSPEEILKMTKETKRILP 183
           +LTS P+CVSSV+P  F AAV+AGA MVEIGNYDSFYEKGV F+PE+IL +TKET+RILP
Sbjct: 111 SLTSCPVCVSSVDPATFPAAVEAGALMVEIGNYDSFYEKGVIFTPEQILSLTKETRRILP 170

Query: 184 SVVLSVTVPHMLGLPDQVKLAELLEQEGVDIIQTEGGKCSNPSKSGVLGLIEKASPTLAA 363
           SVVLSVTVPH L LPDQVKLAE LE EGVDIIQTEGGKCSNP+KSGVLGLIEKA+PTLAA
Sbjct: 171 SVVLSVTVPHTLSLPDQVKLAESLELEGVDIIQTEGGKCSNPTKSGVLGLIEKATPTLAA 230

Query: 364 AYSISRAVRIPVMCSSGLSSVTAPMALXXXXXXXXXXXXXNKLNDVVVMIAEVRSIADSL 543
           AYSISRAV+IPVMCSSGLS+VTAPMA+             NKLNDVV MIAEVRSIADSL
Sbjct: 231 AYSISRAVKIPVMCSSGLSAVTAPMAITAGASGVGVGSAVNKLNDVVAMIAEVRSIADSL 290


>ref|XP_004162606.1| PREDICTED: uncharacterized protein ycf23-like [Cucumis sativus]
          Length = 352

 Score =  271 bits (692), Expect = 1e-70
 Identities = 139/188 (73%), Positives = 158/188 (84%)
 Frame = +1

Query: 4   TLTSLPICVSSVNPKAFLAAVDAGAQMVEIGNYDSFYEKGVYFSPEEILKMTKETKRILP 183
           +LTSLP+CVSSV+P  FL AV+AGA MVEIGNYDSFYE G+ FS ++IL +TKET+R+LP
Sbjct: 156 SLTSLPVCVSSVDPAEFLPAVEAGALMVEIGNYDSFYEAGIIFSADQILNLTKETRRLLP 215

Query: 184 SVVLSVTVPHMLGLPDQVKLAELLEQEGVDIIQTEGGKCSNPSKSGVLGLIEKASPTLAA 363
           SV LSVTVPH LGLPDQVKLAELLEQEGVD+IQTEGGKCS+PSKSG+LGLIEKA+PTLAA
Sbjct: 216 SVALSVTVPHTLGLPDQVKLAELLEQEGVDVIQTEGGKCSHPSKSGILGLIEKAAPTLAA 275

Query: 364 AYSISRAVRIPVMCSSGLSSVTAPMALXXXXXXXXXXXXXNKLNDVVVMIAEVRSIADSL 543
           AYSISRAV+IPVMCSSGLS+VTAPMA+             NKLN+VV MIAEVRSIADSL
Sbjct: 276 AYSISRAVKIPVMCSSGLSAVTAPMAITAGAAGVGVGSAVNKLNNVVAMIAEVRSIADSL 335

Query: 544 GLPTGDLT 567
                 L+
Sbjct: 336 APTAAQLS 343


>ref|XP_004134587.1| PREDICTED: uncharacterized protein ycf23-like [Cucumis sativus]
          Length = 350

 Score =  271 bits (692), Expect = 1e-70
 Identities = 139/188 (73%), Positives = 158/188 (84%)
 Frame = +1

Query: 4   TLTSLPICVSSVNPKAFLAAVDAGAQMVEIGNYDSFYEKGVYFSPEEILKMTKETKRILP 183
           +LTSLP+CVSSV+P  FL AV+AGA MVEIGNYDSFYE G+ FS ++IL +TKET+R+LP
Sbjct: 154 SLTSLPVCVSSVDPAEFLPAVEAGALMVEIGNYDSFYEAGIIFSADQILNLTKETRRLLP 213

Query: 184 SVVLSVTVPHMLGLPDQVKLAELLEQEGVDIIQTEGGKCSNPSKSGVLGLIEKASPTLAA 363
           SV LSVTVPH LGLPDQVKLAELLEQEGVD+IQTEGGKCS+PSKSG+LGLIEKA+PTLAA
Sbjct: 214 SVALSVTVPHTLGLPDQVKLAELLEQEGVDVIQTEGGKCSHPSKSGILGLIEKAAPTLAA 273

Query: 364 AYSISRAVRIPVMCSSGLSSVTAPMALXXXXXXXXXXXXXNKLNDVVVMIAEVRSIADSL 543
           AYSISRAV+IPVMCSSGLS+VTAPMA+             NKLN+VV MIAEVRSIADSL
Sbjct: 274 AYSISRAVKIPVMCSSGLSAVTAPMAITAGAAGVGVGSAVNKLNNVVAMIAEVRSIADSL 333

Query: 544 GLPTGDLT 567
                 L+
Sbjct: 334 APTAAQLS 341


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