BLASTX nr result

ID: Coptis24_contig00018504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00018504
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274195.1| PREDICTED: kinesin-like calmodulin-binding p...   146   2e-33
ref|XP_002319046.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
ref|XP_002512269.1| ATP binding protein, putative [Ricinus commu...   137   9e-31
ref|XP_003535361.1| PREDICTED: kinesin-1-like [Glycine max]           131   5e-29
ref|XP_003555586.1| PREDICTED: kinesin-1-like [Glycine max]           131   6e-29

>ref|XP_002274195.1| PREDICTED: kinesin-like calmodulin-binding protein [Vitis vinifera]
           gi|298204930|emb|CBI34237.3| unnamed protein product
           [Vitis vinifera]
          Length = 640

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/92 (73%), Positives = 81/92 (88%)
 Frame = +3

Query: 6   SISYSFSMSMLEVYMGSLRDLLAPKLPARTHETSSKCNLNIQSDPNGFIKVEGLTDVSVS 185
           S SY+FSMSMLEVYMGSLRDLLAPK  +R +ET S+CNLNIQ+DP G +++EGL++V +S
Sbjct: 219 SSSYTFSMSMLEVYMGSLRDLLAPKSFSRAYETISRCNLNIQTDPKGLVEIEGLSEVPIS 278

Query: 186 DLTQASRWYTKGRRARSTSWTNVNDASSRSHC 281
           D T+AS WYTKGRR RSTSWTNVN+ASSRSHC
Sbjct: 279 DFTKASWWYTKGRRVRSTSWTNVNEASSRSHC 310


>ref|XP_002319046.1| predicted protein [Populus trichocarpa] gi|222857422|gb|EEE94969.1|
           predicted protein [Populus trichocarpa]
          Length = 637

 Score =  139 bits (349), Expect = 3e-31
 Identities = 63/90 (70%), Positives = 76/90 (84%)
 Frame = +3

Query: 12  SYSFSMSMLEVYMGSLRDLLAPKLPARTHETSSKCNLNIQSDPNGFIKVEGLTDVSVSDL 191
           S +FSMSMLEVYMG+LRDLLAPK+ +RTHE ++KC+LNIQ+DP G ++VEGLT V + D 
Sbjct: 219 SITFSMSMLEVYMGNLRDLLAPKVASRTHEVAAKCSLNIQTDPKGMVEVEGLTQVQIPDT 278

Query: 192 TQASRWYTKGRRARSTSWTNVNDASSRSHC 281
            +A  WY KGRRARSTSWTNVN+ SSRSHC
Sbjct: 279 AKAKWWYAKGRRARSTSWTNVNETSSRSHC 308


>ref|XP_002512269.1| ATP binding protein, putative [Ricinus communis]
           gi|223548230|gb|EEF49721.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 499

 Score =  137 bits (345), Expect = 9e-31
 Identities = 61/92 (66%), Positives = 79/92 (85%)
 Frame = +3

Query: 6   SISYSFSMSMLEVYMGSLRDLLAPKLPARTHETSSKCNLNIQSDPNGFIKVEGLTDVSVS 185
           S S +FSMSMLEVYMG+LRDLLAPK+  +++E +++CNLNIQ+DP G +++EGLT+V + 
Sbjct: 78  SYSVTFSMSMLEVYMGNLRDLLAPKVAYKSYEAAARCNLNIQTDPKGLVEIEGLTEVKIP 137

Query: 186 DLTQASRWYTKGRRARSTSWTNVNDASSRSHC 281
           DL +A  WY+KGRRARSTSWTNVN+ SSRSHC
Sbjct: 138 DLAKAKWWYSKGRRARSTSWTNVNETSSRSHC 169


>ref|XP_003535361.1| PREDICTED: kinesin-1-like [Glycine max]
          Length = 642

 Score =  131 bits (330), Expect = 5e-29
 Identities = 61/94 (64%), Positives = 77/94 (81%), Gaps = 1/94 (1%)
 Frame = +3

Query: 3   NSISYSFSMSMLEVYMGSLRDLLAPKLPARTHET-SSKCNLNIQSDPNGFIKVEGLTDVS 179
           NS S++F+MSMLEVYMG+LRDLL+P+   R HE   +KCNLNIQ+DP G I++EGL++V 
Sbjct: 209 NSSSFTFTMSMLEVYMGNLRDLLSPRQSGRPHEQYMTKCNLNIQTDPKGLIEIEGLSEVQ 268

Query: 180 VSDLTQASRWYTKGRRARSTSWTNVNDASSRSHC 281
           +SD  +A  WY KG+R RSTSWTNVN+ASSRSHC
Sbjct: 269 ISDYAKAKWWYNKGKRFRSTSWTNVNEASSRSHC 302


>ref|XP_003555586.1| PREDICTED: kinesin-1-like [Glycine max]
          Length = 639

 Score =  131 bits (329), Expect = 6e-29
 Identities = 61/94 (64%), Positives = 77/94 (81%), Gaps = 1/94 (1%)
 Frame = +3

Query: 3   NSISYSFSMSMLEVYMGSLRDLLAPKLPARTHET-SSKCNLNIQSDPNGFIKVEGLTDVS 179
           NS S++F+MSMLEVYMG+LRDLL+P+   R HE   +KCNLNIQ+DP G I++EGL++V 
Sbjct: 207 NSSSFTFTMSMLEVYMGNLRDLLSPRPSGRPHEQYMTKCNLNIQTDPKGLIEIEGLSEVQ 266

Query: 180 VSDLTQASRWYTKGRRARSTSWTNVNDASSRSHC 281
           +SD  +A  WY KG+R RSTSWTNVN+ASSRSHC
Sbjct: 267 ISDYAKAKWWYNKGKRFRSTSWTNVNEASSRSHC 300


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