BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017986
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37733.3| unnamed protein product [Vitis vinifera]              102   4e-20
ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vin...   102   4e-20
ref|XP_002313575.1| glutamate-gated kainate-type ion channel rec...    99   3e-19
ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinu...    95   7e-18
emb|CAN64711.1| hypothetical protein VITISV_043726 [Vitis vinifera]    94   9e-18

>emb|CBI37733.3| unnamed protein product [Vitis vinifera]
          Length = 1147

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/78 (64%), Positives = 60/78 (76%)
 Frame = +1

Query: 10  WLLALSILSFGEFSNGASRPAVVNIGAIFTLGTINGQVSKIAMEAAVNDVNSDPSFLGGS 189
           WL+ L IL    ++ G   P VVNIGAIFT  TING+V+KIAM+AA  DVNSDPS LGG 
Sbjct: 235 WLVLLLILCIRGYTEGVLNPEVVNIGAIFTFSTINGKVAKIAMKAAEQDVNSDPSILGGR 294

Query: 190 KLNITVHDSNFNGFLSII 243
           KL IT+HDSN++GFLSI+
Sbjct: 295 KLAITLHDSNYSGFLSIV 312


>ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vinifera]
          Length = 917

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/78 (64%), Positives = 60/78 (76%)
 Frame = +1

Query: 10  WLLALSILSFGEFSNGASRPAVVNIGAIFTLGTINGQVSKIAMEAAVNDVNSDPSFLGGS 189
           WL+ L IL    ++ G   P VVNIGAIFT  TING+V+KIAM+AA  DVNSDPS LGG 
Sbjct: 5   WLVLLLILCIRGYTEGVLNPEVVNIGAIFTFSTINGKVAKIAMKAAEQDVNSDPSILGGR 64

Query: 190 KLNITVHDSNFNGFLSII 243
           KL IT+HDSN++GFLSI+
Sbjct: 65  KLAITLHDSNYSGFLSIV 82


>ref|XP_002313575.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222849983|gb|EEE87530.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 900

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/79 (63%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
 Frame = +1

Query: 10  WLLALSILSFGEFSNGASRPA-VVNIGAIFTLGTINGQVSKIAMEAAVNDVNSDPSFLGG 186
           WLL+  IL    FS GA  P   VN+GAIFT  +ING+V+KIAMEAA +D+NSDPS LGG
Sbjct: 5   WLLSFWILCTSSFSQGALSPGGTVNVGAIFTFSSINGRVAKIAMEAAEDDINSDPSLLGG 64

Query: 187 SKLNITVHDSNFNGFLSII 243
            KL+I +HDSNF+GFL II
Sbjct: 65  RKLSINMHDSNFSGFLGII 83


>ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinus communis]
           gi|223540205|gb|EEF41779.1| glutamate receptor 3 plant,
           putative [Ricinus communis]
          Length = 924

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 44/78 (56%), Positives = 60/78 (76%)
 Frame = +1

Query: 10  WLLALSILSFGEFSNGASRPAVVNIGAIFTLGTINGQVSKIAMEAAVNDVNSDPSFLGGS 189
           WL++  ++     S+GA  P V+N+GAIFT  TING+V++IAM+AA +D+NSDPS LGG 
Sbjct: 5   WLVSF-LVCISSLSHGAPNPGVINVGAIFTFNTINGKVARIAMKAAEDDINSDPSILGGW 63

Query: 190 KLNITVHDSNFNGFLSII 243
           K + T+HDSNF+GFL II
Sbjct: 64  KFSTTMHDSNFSGFLGII 81


>emb|CAN64711.1| hypothetical protein VITISV_043726 [Vitis vinifera]
          Length = 959

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/66 (68%), Positives = 54/66 (81%)
 Frame = +1

Query: 46  FSNGASRPAVVNIGAIFTLGTINGQVSKIAMEAAVNDVNSDPSFLGGSKLNITVHDSNFN 225
           ++ G   P VVNIGAIFT  TING+V+KIAM+AA  DVNSDPS LGG KL IT+HDSN++
Sbjct: 76  YTEGVLNPEVVNIGAIFTFSTINGKVAKIAMKAAEQDVNSDPSILGGRKLAITLHDSNYS 135

Query: 226 GFLSII 243
           GFLSI+
Sbjct: 136 GFLSIV 141