BLASTX nr result

ID: Coptis24_contig00017983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017983
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273662.1| PREDICTED: dolichol kinase [Vitis vinifera] ...    80   2e-13
ref|XP_002523693.1| Transmembrane protein, putative [Ricinus com...    72   6e-11
gb|AFW70133.1| hypothetical protein ZEAMMB73_937323 [Zea mays]         70   2e-10
ref|NP_190090.2| dolichol kinase [Arabidopsis thaliana] gi|33264...    69   3e-10
emb|CAB89319.1| putative protein [Arabidopsis thaliana]                69   3e-10

>ref|XP_002273662.1| PREDICTED: dolichol kinase [Vitis vinifera]
           gi|297734932|emb|CBI17166.3| unnamed protein product
           [Vitis vinifera]
          Length = 564

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 53/134 (39%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
 Frame = -1

Query: 440 VEIFLENSKSH--FKARPAASSGILLGSVTLPTVMLSRLIQLSRAPISPPQXXXXXXXXX 267
           ++I L+NS     FK RP ASSGI LG+VTLP VM+SRLIQLSRA               
Sbjct: 46  LDIRLDNSNFSVPFKTRPGASSGIFLGAVTLPAVMISRLIQLSRA--------------- 90

Query: 266 XXXXXXXXXXXXXXXXXXDVGYLVVQYWVVSASCFSVLVFLTLALRRHSVNRRILGGLLS 87
                             ++GYL VQYW  SASCF VL+F+ L +RR   N         
Sbjct: 91  ---------FSLHEVGIKELGYLKVQYWATSASCFGVLIFIFLLMRRSPNNSCSFSSNSP 141

Query: 86  YVVLYTSLCFLSLA 45
             + ++S C +S A
Sbjct: 142 QGLKFSSSCVVSCA 155


>ref|XP_002523693.1| Transmembrane protein, putative [Ricinus communis]
           gi|223536997|gb|EEF38633.1| Transmembrane protein,
           putative [Ricinus communis]
          Length = 565

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 42/98 (42%), Positives = 50/98 (51%)
 Frame = -1

Query: 422 NSKSHFKARPAASSGILLGSVTLPTVMLSRLIQLSRAPISPPQXXXXXXXXXXXXXXXXX 243
           NS S FK RP ASSGI LG++TLP VMLS+LIQLSRA                       
Sbjct: 57  NSLSQFKTRPGASSGIFLGAITLPAVMLSKLIQLSRA----------------------- 93

Query: 242 XXXXXXXXXXDVGYLVVQYWVVSASCFSVLVFLTLALR 129
                     ++ YL +QYW  SA C SVL+FL   +R
Sbjct: 94  -FSLHQIESGELNYLAMQYWATSAICMSVLIFLCSVMR 130


>gb|AFW70133.1| hypothetical protein ZEAMMB73_937323 [Zea mays]
          Length = 575

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 53/145 (36%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
 Frame = -1

Query: 440 VEIFLENSKS----HFKARPAASSGILLGSVTLPTVMLSRLIQLSRAPISPPQXXXXXXX 273
           VE+ ++ S S     F+ RP ASSGILLG+ TLP+VMLSRLIQLSR   + P        
Sbjct: 56  VELAVDGSGSAPLRRFRTRPGASSGILLGATTLPSVMLSRLIQLSRLLPADPN------- 108

Query: 272 XXXXXXXXXXXXXXXXXXXXDVGYLVVQYWVVSASCFSVLVFLTLALRR---HSVNRRIL 102
                               +  YL +QYW  S SC SVL      L++   + +++ + 
Sbjct: 109 -----------------GPKEFAYLEMQYWAASISCLSVLALFLWHLQKSPSNGISKHLE 151

Query: 101 GGLLSYVVLYTSLCFLS-LATNDQG 30
            G L ++VLY    FLS L   D+G
Sbjct: 152 YGSL-FIVLYLMTFFLSFLLKTDEG 175


>ref|NP_190090.2| dolichol kinase [Arabidopsis thaliana] gi|332644461|gb|AEE77982.1|
           dolichol kinase [Arabidopsis thaliana]
          Length = 569

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 47/142 (33%), Positives = 72/142 (50%), Gaps = 10/142 (7%)
 Frame = -1

Query: 440 VEIFLENSK---SHFKARPAASSGILLGSVTLPTVMLSRLIQLSRAPISPPQXXXXXXXX 270
           VEI +E S    SHF +R  ASSGILLG+VTLP+VM+S+L+QLSRA              
Sbjct: 48  VEIRVETSPFLLSHFSSRRGASSGILLGAVTLPSVMISKLVQLSRA-------------- 93

Query: 269 XXXXXXXXXXXXXXXXXXXDVGYLVVQYWVVSASCFSVLVFLTLALRRHSVNRRILGG-- 96
                              ++ ++ +QYW  SASC ++L++L++ + +   +  +     
Sbjct: 94  ----------ISIHEAEQDELAHVTMQYWAASASCCAILIYLSVIMSQVRKDESLSSSSI 143

Query: 95  -----LLSYVVLYTSLCFLSLA 45
                 L+  VLY   CF+SL+
Sbjct: 144 WLTRVSLTGTVLYGVACFVSLS 165


>emb|CAB89319.1| putative protein [Arabidopsis thaliana]
          Length = 598

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 47/142 (33%), Positives = 72/142 (50%), Gaps = 10/142 (7%)
 Frame = -1

Query: 440 VEIFLENSK---SHFKARPAASSGILLGSVTLPTVMLSRLIQLSRAPISPPQXXXXXXXX 270
           VEI +E S    SHF +R  ASSGILLG+VTLP+VM+S+L+QLSRA              
Sbjct: 48  VEIRVETSPFLLSHFSSRRGASSGILLGAVTLPSVMISKLVQLSRA-------------- 93

Query: 269 XXXXXXXXXXXXXXXXXXXDVGYLVVQYWVVSASCFSVLVFLTLALRRHSVNRRILGG-- 96
                              ++ ++ +QYW  SASC ++L++L++ + +   +  +     
Sbjct: 94  ----------ISIHEAEQDELAHVTMQYWAASASCCAILIYLSVIMSQVRKDESLSSSSI 143

Query: 95  -----LLSYVVLYTSLCFLSLA 45
                 L+  VLY   CF+SL+
Sbjct: 144 WLTRVSLTGTVLYGVACFVSLS 165


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