BLASTX nr result

ID: Coptis24_contig00017962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017962
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268264.1| PREDICTED: protein TIC 22-like, chloroplasti...   295   5e-78
ref|XP_002301750.1| predicted protein [Populus trichocarpa] gi|2...   290   1e-76
ref|XP_003524917.1| PREDICTED: uncharacterized protein LOC100811...   281   8e-74
ref|XP_004138357.1| PREDICTED: protein TIC 22-like, chloroplasti...   279   3e-73
ref|XP_002883453.1| hypothetical protein ARALYDRAFT_479887 [Arab...   274   1e-71

>ref|XP_002268264.1| PREDICTED: protein TIC 22-like, chloroplastic [Vitis vinifera]
          Length = 293

 Score =  295 bits (755), Expect = 5e-78
 Identities = 147/210 (70%), Positives = 180/210 (85%)
 Frame = +1

Query: 28  LATEAIEERLAGVPVYALSNSNEEFVLISGVKTGKSLGLFCFNKKDADSLLERMRSMDPG 207
           +   AIEERLAGVPVYALSNS++EFVL+SGV+TGKSLGLFC  K+DA++LLE+M+ MDPG
Sbjct: 85  MPASAIEERLAGVPVYALSNSSDEFVLVSGVRTGKSLGLFCLKKEDAETLLEQMKLMDPG 144

Query: 208 MRRGSKVVAVALNKVFQLKINGVAFRFIPDSSQIMNAIKVKQNAGLSSSDFSGVPVFQSQ 387
           MR+GSKVVAVALNKVFQLK++GVAFR +PDS+Q+ NA++V + AG S   FSGVPVFQS+
Sbjct: 145 MRQGSKVVAVALNKVFQLKLDGVAFRLMPDSTQVKNALRVMEKAGFSDDGFSGVPVFQSR 204

Query: 388 SLILKSDNKRYRPVFFRKEDLENSLKVASLEQRKLNPAFRQGDIQVSVLEEIITGMKGSS 567
           SLIL+S +K+YRPVFFRKEDLENSL  AS +Q +LNPAFRQGDIQV+V EEII GM+ ++
Sbjct: 205 SLILQSQDKKYRPVFFRKEDLENSLLSASNQQNRLNPAFRQGDIQVAVFEEIIKGMQENA 264

Query: 568 TSKWDDVVFIPPGFDVSADLAQQEKLTASG 657
           + +WDDVVFIPPGFD S    QQ+  TA+G
Sbjct: 265 SRQWDDVVFIPPGFDASISSPQQQ-ATANG 293


>ref|XP_002301750.1| predicted protein [Populus trichocarpa] gi|222843476|gb|EEE81023.1|
           predicted protein [Populus trichocarpa]
          Length = 299

 Score =  290 bits (743), Expect = 1e-76
 Identities = 147/212 (69%), Positives = 177/212 (83%), Gaps = 1/212 (0%)
 Frame = +1

Query: 4   PIHRFDLALATEAIEERLAGVPVYALSNSNEEFVLISGVKTGKSLGLFCFNKKDADSLLE 183
           P+ +   +++TE IEERLAGVPVYALSNSNEEFVL+SG+ TGKSLGLFCF ++DA++LLE
Sbjct: 88  PVIQPGTSMSTETIEERLAGVPVYALSNSNEEFVLVSGLSTGKSLGLFCFKQEDAEALLE 147

Query: 184 RMRSMDPGMRRG-SKVVAVALNKVFQLKINGVAFRFIPDSSQIMNAIKVKQNAGLSSSDF 360
           +M+SMDPGMR+G SKVV VALNKVFQLK++GVAFR IP+ SQ+ NA+  ++ AGLS   F
Sbjct: 148 QMKSMDPGMRKGGSKVVPVALNKVFQLKVDGVAFRLIPEPSQVKNALMERERAGLSDDCF 207

Query: 361 SGVPVFQSQSLILKSDNKRYRPVFFRKEDLENSLKVASLEQRKLNPAFRQGDIQVSVLEE 540
           SGVPVFQS+SL+LKS N+ YRPVFFRKEDLE SL  AS EQ K+NPAF+QGDI+V+V EE
Sbjct: 208 SGVPVFQSRSLVLKSQNRSYRPVFFRKEDLEKSLLRASREQHKVNPAFKQGDIEVAVFEE 267

Query: 541 IITGMKGSSTSKWDDVVFIPPGFDVSADLAQQ 636
           II  MK  S + WDDVVFIPPGFDVS   A+Q
Sbjct: 268 IIKCMKEGSATTWDDVVFIPPGFDVSTTPAKQ 299


>ref|XP_003524917.1| PREDICTED: uncharacterized protein LOC100811136 [Glycine max]
          Length = 253

 Score =  281 bits (719), Expect = 8e-74
 Identities = 136/205 (66%), Positives = 172/205 (83%)
 Frame = +1

Query: 22  LALATEAIEERLAGVPVYALSNSNEEFVLISGVKTGKSLGLFCFNKKDADSLLERMRSMD 201
           +A+  EAIEERL G+PVYALSN++EEF+L+SG  +GK+LGLFCFNK DA++LL ++  +D
Sbjct: 49  MAMTVEAIEERLEGIPVYALSNASEEFLLVSGSSSGKNLGLFCFNKDDAEALLNQVTLID 108

Query: 202 PGMRRGSKVVAVALNKVFQLKINGVAFRFIPDSSQIMNAIKVKQNAGLSSSDFSGVPVFQ 381
           P  R+GSKVV VALNKVFQLK+NGVAFR IP+ SQ+ NA++ ++ +G +SS FSGVPVFQ
Sbjct: 109 PHARQGSKVVPVALNKVFQLKVNGVAFRLIPEFSQVKNALQEREKSGFASSGFSGVPVFQ 168

Query: 382 SQSLILKSDNKRYRPVFFRKEDLENSLKVASLEQRKLNPAFRQGDIQVSVLEEIITGMKG 561
           S+SLILKS NKR+RP+FFRKEDLEN+LK A+ EQ KLNP  R+GDIQV+ LE++I  MK 
Sbjct: 169 SRSLILKSQNKRFRPLFFRKEDLENTLKSAAREQNKLNPTMRKGDIQVATLEDVIKEMKE 228

Query: 562 SSTSKWDDVVFIPPGFDVSADLAQQ 636
           +STS WDDV+FIPPGFDVS D  +Q
Sbjct: 229 NSTSNWDDVIFIPPGFDVSDDSNEQ 253


>ref|XP_004138357.1| PREDICTED: protein TIC 22-like, chloroplastic-like [Cucumis
           sativus] gi|449496760|ref|XP_004160220.1| PREDICTED:
           protein TIC 22-like, chloroplastic-like [Cucumis
           sativus]
          Length = 301

 Score =  279 bits (714), Expect = 3e-73
 Identities = 138/206 (66%), Positives = 168/206 (81%)
 Frame = +1

Query: 22  LALATEAIEERLAGVPVYALSNSNEEFVLISGVKTGKSLGLFCFNKKDADSLLERMRSMD 201
           L+L+TEAIE+RLAG+PVYALSN++EEFVL+SG    KSLGLFCF K DA++LL+ + +MD
Sbjct: 96  LSLSTEAIEKRLAGIPVYALSNASEEFVLVSGASAQKSLGLFCFKKDDAETLLQHIGTMD 155

Query: 202 PGMRRGSKVVAVALNKVFQLKINGVAFRFIPDSSQIMNAIKVKQNAGLSSSDFSGVPVFQ 381
           P  R GSKVV VALNKVFQL +NGVAFR IP+ SQ+ NA+  ++ AG+S+  FSGVPVFQ
Sbjct: 156 PSARYGSKVVPVALNKVFQLNVNGVAFRLIPECSQVKNALTERKKAGISADGFSGVPVFQ 215

Query: 382 SQSLILKSDNKRYRPVFFRKEDLENSLKVASLEQRKLNPAFRQGDIQVSVLEEIITGMKG 561
           S+SLIL+  NK YRP FFRKEDLENSL+ AS EQ ++NPA R GDIQV+V EEII GMK 
Sbjct: 216 SKSLILRVQNKSYRPAFFRKEDLENSLQRASREQNQINPALRPGDIQVAVFEEIIKGMKD 275

Query: 562 SSTSKWDDVVFIPPGFDVSADLAQQE 639
           +S S WDD+VFIPPGFDVS D  +Q+
Sbjct: 276 NSISTWDDIVFIPPGFDVSTDPKKQQ 301


>ref|XP_002883453.1| hypothetical protein ARALYDRAFT_479887 [Arabidopsis lyrata subsp.
           lyrata] gi|297329293|gb|EFH59712.1| hypothetical protein
           ARALYDRAFT_479887 [Arabidopsis lyrata subsp. lyrata]
          Length = 314

 Score =  274 bits (700), Expect = 1e-71
 Identities = 136/212 (64%), Positives = 172/212 (81%), Gaps = 1/212 (0%)
 Frame = +1

Query: 4   PIHRFDLALATEAIEERLAGVPVYALSNSNEEFVLISGVKTGKSLGLFCFNKKDADSLLE 183
           P+      L  +AIEERLAGVPVYALSNSNEEFVL+SG  +GKSLGL    ++DA++LL+
Sbjct: 103 PVRGSGKGLTADAIEERLAGVPVYALSNSNEEFVLVSGTSSGKSLGLLFCKEEDAETLLK 162

Query: 184 RMRSMDPGMRR-GSKVVAVALNKVFQLKINGVAFRFIPDSSQIMNAIKVKQNAGLSSSDF 360
           +M+SMDP MR+ GSKVVA+AL+KVFQLK+NGVAFR IP+S+Q+ NA+K ++ AG+   DF
Sbjct: 163 QMKSMDPRMRKEGSKVVALALSKVFQLKVNGVAFRLIPESTQVKNALKERKTAGIDDDDF 222

Query: 361 SGVPVFQSQSLILKSDNKRYRPVFFRKEDLENSLKVASLEQRKLNPAFRQGDIQVSVLEE 540
            GVPVFQS+SLIL+S+N  YRPVFFRKEDLE SL  AS +Q +LNPA + GDIQV+V E+
Sbjct: 223 HGVPVFQSKSLILRSENMSYRPVFFRKEDLEKSLIRASSQQNRLNPALKPGDIQVAVFED 282

Query: 541 IITGMKGSSTSKWDDVVFIPPGFDVSADLAQQ 636
           I+ GMK S+TS WDD+VFIPPGF+VS +  Q+
Sbjct: 283 IVKGMKESTTSNWDDIVFIPPGFEVSTEQTQE 314


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