BLASTX nr result

ID: Coptis24_contig00017953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017953
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283723.1| PREDICTED: probable calcium-binding protein ...   143   4e-32
ref|XP_003612498.1| Calcium-binding protein CML42 [Medicago trun...   133   4e-29
ref|XP_002323865.1| predicted protein [Populus trichocarpa] gi|2...   132   5e-29
ref|XP_003621252.1| Calcium-binding protein CML42 [Medicago trun...   130   3e-28
gb|AFK49407.1| unknown [Medicago truncatula]                          126   5e-27

>ref|XP_002283723.1| PREDICTED: probable calcium-binding protein CML45 [Vitis vinifera]
           gi|296082935|emb|CBI22236.3| unnamed protein product
           [Vitis vinifera]
          Length = 198

 Score =  143 bits (360), Expect = 4e-32
 Identities = 82/194 (42%), Positives = 116/194 (59%), Gaps = 1/194 (0%)
 Frame = -2

Query: 644 EKTSSNTLSPFSLAGLIWFLL-FDGVLNWIIEFKKFYSSSRCFFQSLTEFFVGKSKGGSE 468
           E++S   + PF  + ++  +L F+ +  W+   + F+S S  FFQS   FF   ++  +E
Sbjct: 3   ERSSPEMIQPFFSSSILDDILRFEVICLWVTIIQGFFSRSMSFFQSQFSFFCN-TELWAE 61

Query: 467 KKIANXXXXXXXXXXXXKVEDGKLSREDVEMVMGNLRIVCNPDEDKPRERLGLHELSVLF 288
           +K  +            KV+D  L RED+E VM  L I CNP+ +K +ERL   EL+ LF
Sbjct: 62  RKSQDFEVPSRPLSQNVKVDDRSLCREDMETVMERLGICCNPEGEKLQERLRPEELAGLF 121

Query: 287 XXXXXXXXXXXEAFDIFDENRDGFVDASELQRVICSLGFKEGSKLVDCETMIRAFDENRD 108
                      EAF +FD NRDGF+DA ELQRV+ +LGF++G+ + DC+ MI + DENRD
Sbjct: 122 EEKEPSLEELKEAFLVFDANRDGFIDAKELQRVLLNLGFRQGTGIEDCKKMISSHDENRD 181

Query: 107 GKIDFNEFVKLMEN 66
           G+IDFNEFVK  EN
Sbjct: 182 GRIDFNEFVKFTEN 195


>ref|XP_003612498.1| Calcium-binding protein CML42 [Medicago truncatula]
           gi|355513833|gb|AES95456.1| Calcium-binding protein
           CML42 [Medicago truncatula]
          Length = 200

 Score =  133 bits (334), Expect = 4e-29
 Identities = 76/198 (38%), Positives = 111/198 (56%)
 Frame = -2

Query: 650 TMEKTSSNTLSPFSLAGLIWFLLFDGVLNWIIEFKKFYSSSRCFFQSLTEFFVGKSKGGS 471
           T +   SN+ S  +  GLI F ++  +    I  +KF+S+   +F  L +   G  +   
Sbjct: 15  TSQNDDSNSTSCSTFFGLIDFFIYSTLF---IRIQKFFSTF--WFFLLCQLRSGDYEVKG 69

Query: 470 EKKIANXXXXXXXXXXXXKVEDGKLSREDVEMVMGNLRIVCNPDEDKPRERLGLHELSVL 291
           EK++                E G++ R +VE VM  + I C+ + D+  E+ G +ELS L
Sbjct: 70  EKQVLETESNVSR-------ESGEIKRVEVETVMAKMGIFCSSESDELDEKYGSNELSEL 122

Query: 290 FXXXXXXXXXXXEAFDIFDENRDGFVDASELQRVICSLGFKEGSKLVDCETMIRAFDENR 111
           F            AFD+FDEN+DGF+DA ELQRV+C LG  EG ++ +C+ MI+ FDEN+
Sbjct: 123 FDENEPSLEEVKMAFDVFDENKDGFIDAKELQRVMCILGLNEGLEVKNCQKMIKNFDENQ 182

Query: 110 DGKIDFNEFVKLMENSFC 57
           DG+IDF EFVK+MEN  C
Sbjct: 183 DGRIDFTEFVKIMENRLC 200


>ref|XP_002323865.1| predicted protein [Populus trichocarpa] gi|222866867|gb|EEF03998.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  132 bits (333), Expect = 5e-29
 Identities = 82/209 (39%), Positives = 115/209 (55%), Gaps = 7/209 (3%)
 Frame = -2

Query: 662 SQYFTMEKTSSNTLSPFS-LAGLIWFLLFDGVLNWIIEFKKFYSSSRCFFQSLTEFFVGK 486
           S    ++K SSN    FS L  ++  +L + + +     +KF +    F QS  +  +G 
Sbjct: 8   SSLVILQKESSNANQSFSPLFTMVHLVLSELIFSRFSNLQKFLARFWFFLQS--QLGLGN 65

Query: 485 SK------GGSEKKIANXXXXXXXXXXXXKVEDGKLSREDVEMVMGNLRIVCNPDEDKPR 324
           S+      G  + +++               ++  + REDVEMVM NL + C+ + ++ +
Sbjct: 66  SELWEDDDGNQDSELSKQTQESCFDNKRP--DERSICREDVEMVMENLGLFCSSESEELK 123

Query: 323 ERLGLHELSVLFXXXXXXXXXXXEAFDIFDENRDGFVDASELQRVICSLGFKEGSKLVDC 144
           E +G  E+S LF           EAF++FD NRDGFVDASELQRV   LG KEG +L  C
Sbjct: 124 EWMGSDEISQLFDEKEPSLEEVKEAFNVFDHNRDGFVDASELQRVFYKLGLKEGLQLEKC 183

Query: 143 ETMIRAFDENRDGKIDFNEFVKLMENSFC 57
             +IR FDEN DG+IDFNEFVK MENSFC
Sbjct: 184 RKIIRTFDENGDGRIDFNEFVKFMENSFC 212


>ref|XP_003621252.1| Calcium-binding protein CML42 [Medicago truncatula]
           gi|355496267|gb|AES77470.1| Calcium-binding protein
           CML42 [Medicago truncatula]
          Length = 202

 Score =  130 bits (327), Expect = 3e-28
 Identities = 77/196 (39%), Positives = 106/196 (54%)
 Frame = -2

Query: 644 EKTSSNTLSPFSLAGLIWFLLFDGVLNWIIEFKKFYSSSRCFFQSLTEFFVGKSKGGSEK 465
           E T  N  S  +L GLI F ++     + I   KF+SS   F          + KG   K
Sbjct: 13  ENTLQNDESNSTLFGLIDFFMYS---MFFIRIHKFFSSFWFFLFCQLRSGDLEVKG---K 66

Query: 464 KIANXXXXXXXXXXXXKVEDGKLSREDVEMVMGNLRIVCNPDEDKPRERLGLHELSVLFX 285
           K  +              E G++ R +VE VM N+ + C+ + D+  E+    E S LF 
Sbjct: 67  KQLSETELNVSRDSNVSGESGEIKRNEVETVMANMGLFCSSESDELEEKYSSKEFSELFD 126

Query: 284 XXXXXXXXXXEAFDIFDENRDGFVDASELQRVICSLGFKEGSKLVDCETMIRAFDENRDG 105
                      AFD+FDEN+DGF+DA EL+RV+C LGFKEGS++ +C+ MI+ FD N+DG
Sbjct: 127 ENEPSLEEVKMAFDVFDENKDGFIDAMELKRVMCILGFKEGSEVENCQKMIKNFDANQDG 186

Query: 104 KIDFNEFVKLMENSFC 57
           +IDF EFVK+MEN  C
Sbjct: 187 RIDFIEFVKIMENRLC 202


>gb|AFK49407.1| unknown [Medicago truncatula]
          Length = 170

 Score =  126 bits (316), Expect = 5e-27
 Identities = 58/118 (49%), Positives = 80/118 (67%)
 Frame = -2

Query: 410 EDGKLSREDVEMVMGNLRIVCNPDEDKPRERLGLHELSVLFXXXXXXXXXXXEAFDIFDE 231
           E G++ R +VE VM N+ + C+ + D+  E+    E S LF            AFD+FDE
Sbjct: 53  ESGEIKRNEVETVMANMGLFCSSESDELEEKYSSKEFSELFDENEPSLEEVKMAFDVFDE 112

Query: 230 NRDGFVDASELQRVICSLGFKEGSKLVDCETMIRAFDENRDGKIDFNEFVKLMENSFC 57
           N+DGF+DA EL+RV+C LGFKEGS++ +C+ MI+ FD N+DG+IDF EFVK+MEN  C
Sbjct: 113 NKDGFIDAMELKRVMCILGFKEGSEVENCQKMIKNFDANQDGRIDFIEFVKIMENRLC 170


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