BLASTX nr result

ID: Coptis24_contig00017950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017950
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332101.1| cc-nbs-lrr resistance protein [Populus trich...    70   2e-10
ref|XP_002526779.1| leucine-rich repeat containing protein, puta...    67   2e-09
ref|XP_002332098.1| cc-nbs-lrr resistance protein [Populus trich...    66   3e-09
ref|XP_003541583.1| PREDICTED: putative disease resistance prote...    66   3e-09
ref|XP_002330061.1| cc-nbs-lrr resistance protein [Populus trich...    66   3e-09

>ref|XP_002332101.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222874921|gb|EEF12052.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 963

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/74 (43%), Positives = 42/74 (56%)
 Frame = +3

Query: 3   RRKRSVVEWEDVLASNIWEEMSKDEPEFXXXXXXXXXXXXXXXKRCFSYCAIFREDAEID 182
           R K  + EWE VL S++WE   + E +                +RCFSYCA+F +D   +
Sbjct: 385 RFKSRIEEWESVLNSHVWESAEEAESKILAPLWLSYYDLPSDMRRCFSYCAVFPKDFTFE 444

Query: 183 KDELVKLWMAQGFL 224
           +D LVKLWMAQGFL
Sbjct: 445 RDTLVKLWMAQGFL 458


>ref|XP_002526779.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223533855|gb|EEF35585.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1174

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/78 (41%), Positives = 44/78 (56%)
 Frame = +3

Query: 3   RRKRSVVEWEDVLASNIWEEMSKDEPEFXXXXXXXXXXXXXXXKRCFSYCAIFREDAEID 182
           R K+ V EWE +L S++W   +  +                  KRCFSYCAIF +D E +
Sbjct: 378 RTKKEVKEWEKILKSSLW---NSSDDNILPALRLSYHDLPSHLKRCFSYCAIFPKDYEFE 434

Query: 183 KDELVKLWMAQGFLSYDS 236
           K+EL+ LWMA+GFL + S
Sbjct: 435 KEELILLWMAEGFLVHSS 452


>ref|XP_002332098.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222874918|gb|EEF12049.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 922

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/74 (43%), Positives = 43/74 (58%)
 Frame = +3

Query: 3   RRKRSVVEWEDVLASNIWEEMSKDEPEFXXXXXXXXXXXXXXXKRCFSYCAIFREDAEID 182
           R KRS  EW+ VL S++WE   + E +                +RCFSYCA+F +D +  
Sbjct: 356 RFKRSRAEWQSVLNSHVWET-EEAESKILASLQLSYHDLPSDMRRCFSYCAVFPKDFKFQ 414

Query: 183 KDELVKLWMAQGFL 224
           +D L+KLWMAQGFL
Sbjct: 415 RDTLIKLWMAQGFL 428


>ref|XP_003541583.1| PREDICTED: putative disease resistance protein RGA3-like [Glycine
           max]
          Length = 1194

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/74 (40%), Positives = 43/74 (58%)
 Frame = +3

Query: 9   KRSVVEWEDVLASNIWEEMSKDEPEFXXXXXXXXXXXXXXXKRCFSYCAIFREDAEIDKD 188
           K S  EW++V  S IW+ + K++ E                KRCF+YCA+F +D E DKD
Sbjct: 381 KVSASEWKNVFLSKIWD-LPKEDNEIIPALLLSYHHLPSHLKRCFAYCALFSKDHEFDKD 439

Query: 189 ELVKLWMAQGFLSY 230
           +L+ LWMA+ FL +
Sbjct: 440 DLIMLWMAENFLQF 453


>ref|XP_002330061.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222871486|gb|EEF08617.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1118

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/74 (43%), Positives = 43/74 (58%)
 Frame = +3

Query: 3   RRKRSVVEWEDVLASNIWEEMSKDEPEFXXXXXXXXXXXXXXXKRCFSYCAIFREDAEID 182
           R KR   EWE +L SN+W+  + D                   K+CF+YCAIF E+ E +
Sbjct: 387 RFKRDAKEWEKILKSNMWDLPNDD---ILPVLRLSYHYLPPQLKQCFAYCAIFPENHEFN 443

Query: 183 KDELVKLWMAQGFL 224
           KDEL++LWMA+GFL
Sbjct: 444 KDELIRLWMAEGFL 457


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