BLASTX nr result

ID: Coptis24_contig00017949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017949
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541583.1| PREDICTED: putative disease resistance prote...    95   5e-18
ref|XP_002519369.1| Disease resistance protein RPS2, putative [R...    95   7e-18
ref|XP_002518080.1| leucine-rich repeat-containing protein, puta...    94   9e-18
emb|CAN74893.1| hypothetical protein VITISV_002003 [Vitis vinifera]    94   9e-18
ref|XP_002268547.2| PREDICTED: putative disease resistance prote...    94   1e-17

>ref|XP_003541583.1| PREDICTED: putative disease resistance protein RGA3-like [Glycine
           max]
          Length = 1194

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 51/112 (45%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
 Frame = -1

Query: 335 PLAVKIIASLMCRKGSVLEWEDVHTSDIWDVMSEDEHGFXXXXXXXXXXXXXXLKRCFSY 156
           PLA+K I SL+  K S  EW++V  S IWD+  ED                  LKRCF+Y
Sbjct: 368 PLALKTIGSLLYTKVSASEWKNVFLSKIWDLPKEDNE-IIPALLLSYHHLPSHLKRCFAY 426

Query: 155 CAVFREDAEIDKDELVKLWMAQGFFGY-DSSKDLEKIGTSYFNDLAMRSLFQ 3
           CA+F +D E DKD+L+ LWMA+ F  +   SK  E++G  YFNDL  RS FQ
Sbjct: 427 CALFSKDHEFDKDDLIMLWMAENFLQFPQQSKRPEEVGEQYFNDLLSRSFFQ 478


>ref|XP_002519369.1| Disease resistance protein RPS2, putative [Ricinus communis]
           gi|223541436|gb|EEF42986.1| Disease resistance protein
           RPS2, putative [Ricinus communis]
          Length = 1318

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/112 (43%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
 Frame = -1

Query: 335 PLAVKIIASLMCRKGSVLEWEDVHTSDIWDVMSEDEHGFXXXXXXXXXXXXXXLKRCFSY 156
           PLA K + SL+  K S  EWED+ +S IWD +SE++ G               LK+CF+Y
Sbjct: 396 PLAAKTLGSLLHTKVSQDEWEDIFSSKIWD-LSEEQSGILPALRLSYHHLPSHLKQCFAY 454

Query: 155 CAVFREDAEIDKDELVKLWMAQGFFGY-DSSKDLEKIGTSYFNDLAMRSLFQ 3
           C++F +D E  K+EL+ LWMA+GF      +K +E +G  YF+DL  RSLFQ
Sbjct: 455 CSIFPKDYEFSKEELILLWMAEGFLQQPKGTKRMENLGAKYFDDLLSRSLFQ 506


>ref|XP_002518080.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223542676|gb|EEF44213.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 940

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/111 (42%), Positives = 67/111 (60%)
 Frame = -1

Query: 335 PLAVKIIASLMCRKGSVLEWEDVHTSDIWDVMSEDEHGFXXXXXXXXXXXXXXLKRCFSY 156
           PLA+K + SLM  K +   WED+  S++W++  E E G               +KRCF+Y
Sbjct: 376 PLALKTLGSLMRFKETKQAWEDILDSELWEI-EEVERGIFTPLLLSYYDLPSPMKRCFTY 434

Query: 155 CAVFREDAEIDKDELVKLWMAQGFFGYDSSKDLEKIGTSYFNDLAMRSLFQ 3
           CA+F +D ++DK+ L+  WMAQGF     S D+E+ G  YF++LAMRS FQ
Sbjct: 435 CAIFPKDYKMDKETLIHHWMAQGFLVPSGSMDMEQKGAEYFDNLAMRSFFQ 485


>emb|CAN74893.1| hypothetical protein VITISV_002003 [Vitis vinifera]
          Length = 798

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/111 (42%), Positives = 66/111 (59%)
 Frame = -1

Query: 335 PLAVKIIASLMCRKGSVLEWEDVHTSDIWDVMSEDEHGFXXXXXXXXXXXXXXLKRCFSY 156
           PLA+K + +LM  K +  EWE+V  S++W  + E E                 +KRCFS+
Sbjct: 390 PLAIKTLGNLMRLKNNXEEWENVLNSEVWQ-LDEFERDICPALLLSYYDLPPAIKRCFSF 448

Query: 155 CAVFREDAEIDKDELVKLWMAQGFFGYDSSKDLEKIGTSYFNDLAMRSLFQ 3
           CAVF +D+ I  DEL++LWMAQ +   D+SK++E +G  YF  LA RS FQ
Sbjct: 449 CAVFPKDSVIKIDELIRLWMAQNYLNSDASKEMEMVGREYFEYLAARSFFQ 499


>ref|XP_002268547.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 880

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 47/111 (42%), Positives = 66/111 (59%)
 Frame = -1

Query: 335 PLAVKIIASLMCRKGSVLEWEDVHTSDIWDVMSEDEHGFXXXXXXXXXXXXXXLKRCFSY 156
           PLA+K + +LM  K +  EWE+V  S++W  + E E                 +KRCFS+
Sbjct: 354 PLAIKTLGNLMRLKNNKEEWENVLNSEVWQ-LDEFERDICPALLLSYYDLPPAIKRCFSF 412

Query: 155 CAVFREDAEIDKDELVKLWMAQGFFGYDSSKDLEKIGTSYFNDLAMRSLFQ 3
           CAVF +D+ I  DEL++LWMAQ +   D+SK++E +G  YF  LA RS FQ
Sbjct: 413 CAVFPKDSVIKIDELIRLWMAQNYLNSDASKEMEMVGREYFEYLAARSFFQ 463


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