BLASTX nr result

ID: Coptis24_contig00017948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017948
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ33566.1| CC-NBS-LRR type resistance protein, partial [Cap...    79   4e-13
dbj|BAJ33565.1| CC-NBS-LRR type resistance protein, partial [Cap...    79   4e-13
dbj|BAJ33561.1| CC-NBS-LRR type resistance protein, partial [Cap...    79   4e-13
gb|ABR29787.1| CC-NBS-LRR protein [Solanum tuberosum] gi|1497865...    79   4e-13
dbj|BAJ33562.1| CC-NBS-LRR type resistance protein, partial [Cap...    79   5e-13

>dbj|BAJ33566.1| CC-NBS-LRR type resistance protein, partial [Capsicum chacoense]
          Length = 1315

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
 Frame = -2

Query: 291 WSFFKHIALREIQ-DNREKFEEIGKKIAWKCKGVPLAVKIIASLMCLKGSVLEWEDVLAS 115
           W  FK  +L+    +   + EE+GK+IA KCKG+PLA+K +A ++C K  V EW++VL S
Sbjct: 337 WDLFKQHSLKNRDPEEHPELEEVGKQIADKCKGLPLALKALAGILCRKSEVYEWKNVLRS 396

Query: 114 DIWEVMSEDEHGFXXXXXXXXXXXXXXLKRCFSYCAIF 1
           +IWE +   ++G               LKRCF++CAI+
Sbjct: 397 EIWE-LPRRKNGILPELMMSYNDLPAHLKRCFAFCAIY 433


>dbj|BAJ33565.1| CC-NBS-LRR type resistance protein, partial [Capsicum baccatum]
          Length = 1315

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
 Frame = -2

Query: 291 WSFFKHIALREIQ-DNREKFEEIGKKIAWKCKGVPLAVKIIASLMCLKGSVLEWEDVLAS 115
           W  FK  +L+    +   + EE+GK+IA KCKG+PLA+K +A ++C K  V EW++VL S
Sbjct: 337 WDLFKQHSLKNRDPEEHPELEEVGKQIADKCKGLPLALKALAGILCRKSEVYEWKNVLRS 396

Query: 114 DIWEVMSEDEHGFXXXXXXXXXXXXXXLKRCFSYCAIF 1
           +IWE +   ++G               LKRCF++CAI+
Sbjct: 397 EIWE-LPRRKNGILPELMMSYNDLPAHLKRCFAFCAIY 433


>dbj|BAJ33561.1| CC-NBS-LRR type resistance protein, partial [Capsicum annuum]
          Length = 1315

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
 Frame = -2

Query: 291 WSFFKHIALREIQ-DNREKFEEIGKKIAWKCKGVPLAVKIIASLMCLKGSVLEWEDVLAS 115
           W  FK  +L+    +   + EE+GK+IA KCKG+PLA+K +A ++C K  V EW++VL S
Sbjct: 337 WDLFKQHSLKNRDPEEHPELEEVGKQIADKCKGLPLALKALAGILCRKSEVYEWKNVLRS 396

Query: 114 DIWEVMSEDEHGFXXXXXXXXXXXXXXLKRCFSYCAIF 1
           +IWE +   ++G               LKRCF++CAI+
Sbjct: 397 EIWE-LPRRKNGILPELMLSYNDLPAHLKRCFAFCAIY 433


>gb|ABR29787.1| CC-NBS-LRR protein [Solanum tuberosum] gi|149786542|gb|ABR29790.1|
           CC-NBS-LRR protein [Solanum tuberosum]
          Length = 1329

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 44/99 (44%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
 Frame = -2

Query: 291 WSFFKHIALREIQDNRE--KFEEIGKKIAWKCKGVPLAVKIIASLMCLKGSVLEWEDVLA 118
           W+ FK  +L E +D  E  + EEIGKKIA KCKG+PLA+K +A ++  K ++ EW+ +L 
Sbjct: 340 WALFKRHSL-ENRDPEEHLELEEIGKKIAEKCKGLPLAIKTLAGMLRSKSAIEEWKRILR 398

Query: 117 SDIWEVMSEDEHGFXXXXXXXXXXXXXXLKRCFSYCAIF 1
           S+IWE+    ++G               LKRCFSYCAIF
Sbjct: 399 SEIWEL---PDNGILPALMLSYNDLPPHLKRCFSYCAIF 434


>dbj|BAJ33562.1| CC-NBS-LRR type resistance protein, partial [Capsicum annuum]
          Length = 1315

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
 Frame = -2

Query: 291 WSFFKHIALREIQDNRE--KFEEIGKKIAWKCKGVPLAVKIIASLMCLKGSVLEWEDVLA 118
           W  FK  +L+  +D  E  + EE+GK+IA KCKG+PLA+K +A ++C K  V EW++VL 
Sbjct: 337 WDLFKQHSLKN-RDPEEHLELEEVGKQIADKCKGLPLALKALAGILCRKSEVYEWKNVLR 395

Query: 117 SDIWEVMSEDEHGFXXXXXXXXXXXXXXLKRCFSYCAIF 1
           S+IWE +   ++G               LKRCF++CAI+
Sbjct: 396 SEIWE-LPRRKNGILPELMLSYTDLPAHLKRCFAFCAIY 433


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