BLASTX nr result
ID: Coptis24_contig00017943
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017943 (533 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN75409.1| hypothetical protein VITISV_018961 [Vitis vinifera] 51 7e-06 emb|CAN60916.1| hypothetical protein VITISV_014386 [Vitis vinifera] 52 9e-06 >emb|CAN75409.1| hypothetical protein VITISV_018961 [Vitis vinifera] Length = 445 Score = 51.2 bits (121), Expect(2) = 7e-06 Identities = 25/54 (46%), Positives = 33/54 (61%) Frame = +3 Query: 369 LGFRHIRDINSSLLSKWI*LFGNEECGLWKDVIRDKYRLDGMGGFTKKVSSTYG 530 LG R + +N +LL KWI F E+ LWK V+ KY +G G TKKV+ T+G Sbjct: 229 LGLRKLVPLNKALLGKWIWRFACEKENLWKQVLLAKYGQEGFGWRTKKVNETFG 282 Score = 23.5 bits (49), Expect(2) = 7e-06 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +2 Query: 320 DFLWGTINDAKRYHSIAW 373 DFLWG N ++ H + W Sbjct: 200 DFLWGGGNLERKVHLVNW 217 >emb|CAN60916.1| hypothetical protein VITISV_014386 [Vitis vinifera] Length = 257 Score = 52.0 bits (123), Expect(2) = 9e-06 Identities = 26/54 (48%), Positives = 32/54 (59%) Frame = +3 Query: 369 LGFRHIRDINSSLLSKWI*LFGNEECGLWKDVIRDKYRLDGMGGFTKKVSSTYG 530 LG R I +N +LL KWI +F E+ LWK VI KY +G G TKK T+G Sbjct: 170 LGIRKIDPLNKALLGKWIWIFAYEKDNLWKRVIGVKYGQEGFGWRTKKARETFG 223 Score = 22.3 bits (46), Expect(2) = 9e-06 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +2 Query: 320 DFLWGTINDAKRYHSIAW 373 DFLWG + ++ H I W Sbjct: 141 DFLWGGGSFERKVHLINW 158