BLASTX nr result
ID: Coptis24_contig00017933
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017933 (284 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containi... 136 2e-30 emb|CBI24939.3| unnamed protein product [Vitis vinifera] 136 2e-30 ref|NP_190885.5| tetratricopeptide repeat domain-containing prot... 133 2e-29 sp|Q9SCP4.1|PP279_ARATH RecName: Full=Pentatricopeptide repeat-c... 133 2e-29 ref|XP_002517779.1| pentatricopeptide repeat-containing protein,... 131 5e-29 >ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein At3g53170-like [Vitis vinifera] Length = 538 Score = 136 bits (343), Expect = 2e-30 Identities = 66/94 (70%), Positives = 77/94 (81%) Frame = +1 Query: 1 AITNNQWESALKIFELLRKQDWYVPRCQTYTKLFVMLGKCKQPGYASLLYEKMVAEGLKP 180 AI N++ESALKIF LLRKQ WY PRCQTYTKL +MLGKCKQP ASLL+E M++EGL+P Sbjct: 102 AIRENRYESALKIFGLLRKQHWYEPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRP 161 Query: 181 FVDVYTSLVSVYGLSGHFQEAFGIVEDMKSVTDC 282 +DVYT+LVS YG SG +AF VEDMKSV+DC Sbjct: 162 TLDVYTALVSAYGHSGQLDKAFCTVEDMKSVSDC 195 >emb|CBI24939.3| unnamed protein product [Vitis vinifera] Length = 485 Score = 136 bits (343), Expect = 2e-30 Identities = 66/94 (70%), Positives = 77/94 (81%) Frame = +1 Query: 1 AITNNQWESALKIFELLRKQDWYVPRCQTYTKLFVMLGKCKQPGYASLLYEKMVAEGLKP 180 AI N++ESALKIF LLRKQ WY PRCQTYTKL +MLGKCKQP ASLL+E M++EGL+P Sbjct: 102 AIRENRYESALKIFGLLRKQHWYEPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRP 161 Query: 181 FVDVYTSLVSVYGLSGHFQEAFGIVEDMKSVTDC 282 +DVYT+LVS YG SG +AF VEDMKSV+DC Sbjct: 162 TLDVYTALVSAYGHSGQLDKAFCTVEDMKSVSDC 195 >ref|NP_190885.5| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gi|332645523|gb|AEE79044.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] Length = 499 Score = 133 bits (334), Expect = 2e-29 Identities = 63/94 (67%), Positives = 75/94 (79%) Frame = +1 Query: 1 AITNNQWESALKIFELLRKQDWYVPRCQTYTKLFVMLGKCKQPGYASLLYEKMVAEGLKP 180 AI N+W+SALKIF LLRKQ WY PRC+TYTKLF +LG CKQP ASLL+E M++EGLKP Sbjct: 118 AIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKP 177 Query: 181 FVDVYTSLVSVYGLSGHFQEAFGIVEDMKSVTDC 282 +DVYTSL+SVYG S +AF +E MKSV+DC Sbjct: 178 TIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDC 211 >sp|Q9SCP4.1|PP279_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g53170 gi|6630737|emb|CAB64220.1| nodulin / glutamate-ammonia ligase-like protein [Arabidopsis thaliana] Length = 447 Score = 133 bits (334), Expect = 2e-29 Identities = 63/94 (67%), Positives = 75/94 (79%) Frame = +1 Query: 1 AITNNQWESALKIFELLRKQDWYVPRCQTYTKLFVMLGKCKQPGYASLLYEKMVAEGLKP 180 AI N+W+SALKIF LLRKQ WY PRC+TYTKLF +LG CKQP ASLL+E M++EGLKP Sbjct: 68 AIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKP 127 Query: 181 FVDVYTSLVSVYGLSGHFQEAFGIVEDMKSVTDC 282 +DVYTSL+SVYG S +AF +E MKSV+DC Sbjct: 128 TIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDC 161 >ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223543051|gb|EEF44586.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 486 Score = 131 bits (330), Expect = 5e-29 Identities = 62/94 (65%), Positives = 74/94 (78%) Frame = +1 Query: 1 AITNNQWESALKIFELLRKQDWYVPRCQTYTKLFVMLGKCKQPGYASLLYEKMVAEGLKP 180 AI +W+SALKIFELLRKQ WY PRCQTYTKL +MLGKC+QP A LL+E M EGL+P Sbjct: 102 AIKERRWKSALKIFELLRKQHWYEPRCQTYTKLLMMLGKCRQPEEARLLFEVMQTEGLRP 161 Query: 181 FVDVYTSLVSVYGLSGHFQEAFGIVEDMKSVTDC 282 +DVYT+LVS YG SG +AF V++MKSV+DC Sbjct: 162 TIDVYTALVSAYGESGLLAKAFSTVDEMKSVSDC 195