BLASTX nr result

ID: Coptis24_contig00017925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017925
         (1108 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307463.1| predicted protein [Populus trichocarpa] gi|2...   303   7e-80
ref|XP_002520296.1| protein binding protein, putative [Ricinus c...   298   2e-78
ref|XP_002300959.1| predicted protein [Populus trichocarpa] gi|2...   298   2e-78
ref|XP_002285888.1| PREDICTED: BTB/POZ domain-containing protein...   296   8e-78
ref|NP_680660.2| BTB/POZ domain-containing protein [Arabidopsis ...   295   2e-77

>ref|XP_002307463.1| predicted protein [Populus trichocarpa] gi|222856912|gb|EEE94459.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score =  303 bits (775), Expect = 7e-80
 Identities = 162/245 (66%), Positives = 190/245 (77%), Gaps = 8/245 (3%)
 Frame = -2

Query: 936 MKCISCREEYGAREAGTCKXXXXXXXXXXXXXXXXXXELKAKVSFLKFSSPIDH----RS 769
           M+CISC+E YG  +AGTCK                  +LKAKV+FL+F SP+DH    RS
Sbjct: 1   MRCISCKEYYGRCDAGTCKECYEEASETEEELKREIDDLKAKVAFLRFWSPLDHHITYRS 60

Query: 768 SS--CFTDVLLVAS--DGVVNEIGSPSVSAHKAILASRSPVFKAMLENEMEESRSGTIKI 601
           S+  CFTDV+LVAS  DG+     S  V AHKA+L SRSPVFKAMLENEMEESRSGTIKI
Sbjct: 61  SAGPCFTDVVLVASSDDGLTGTAPSVPVPAHKAVLVSRSPVFKAMLENEMEESRSGTIKI 120

Query: 600 SEVTYDALRSFVQYLYTAEVSLDEQMACDLLVLAEKYQVKHLKSHCETFLTSKLNAENAF 421
           S+V+YDALR+FV Y YTAE  LDEQMA DLL+LAEKYQVKHLK++CE FL SKLN EN+ 
Sbjct: 121 SDVSYDALRTFVNYFYTAEACLDEQMAYDLLILAEKYQVKHLKAYCEKFLVSKLNWENSV 180

Query: 420 MCFAFSSQHNAKNLHEASLSLITENMDKLTKQEEYQELVDKDPRLVVGIYEAYLVKQVNT 241
           + +AF+ QHNAK++ EA+LSLIT+NMDKLTK+EEY ELV+KDPRLVV IYEAYL KQ+NT
Sbjct: 181 VSYAFAHQHNAKHMLEAALSLITDNMDKLTKREEYMELVEKDPRLVVEIYEAYLSKQINT 240

Query: 240 AAAKD 226
           AA KD
Sbjct: 241 AAHKD 245


>ref|XP_002520296.1| protein binding protein, putative [Ricinus communis]
           gi|223540515|gb|EEF42082.1| protein binding protein,
           putative [Ricinus communis]
          Length = 267

 Score =  298 bits (762), Expect = 2e-78
 Identities = 160/244 (65%), Positives = 187/244 (76%), Gaps = 8/244 (3%)
 Frame = -2

Query: 936 MKCISCREEYGAREAGTCKXXXXXXXXXXXXXXXXXXELKAKVSFLKFSSPIDHRSSS-- 763
           M+CISC+EEYG  +AGTCK                  +LKAKV+FL+F SP+DH  S+  
Sbjct: 24  MRCISCKEEYGTIDAGTCKECYEEASETEEELKREIEDLKAKVAFLRFWSPLDHHHSNRS 83

Query: 762 ---CFTDVLLVAS--DGVVNEIGSP-SVSAHKAILASRSPVFKAMLENEMEESRSGTIKI 601
              CFTDV+L+AS  DG     GSP  V AHKA+L SRSPVFKAMLENEMEES SGTIKI
Sbjct: 84  TGPCFTDVVLIASSDDGPT---GSPVPVPAHKAVLVSRSPVFKAMLENEMEESHSGTIKI 140

Query: 600 SEVTYDALRSFVQYLYTAEVSLDEQMACDLLVLAEKYQVKHLKSHCETFLTSKLNAENAF 421
           S+V+YDALR F+ YLYTAE  LDEQMACDLLVLAEKYQVKHLK++CE FL SKLN  N+ 
Sbjct: 141 SDVSYDALRMFINYLYTAEACLDEQMACDLLVLAEKYQVKHLKAYCEKFLVSKLNWNNSV 200

Query: 420 MCFAFSSQHNAKNLHEASLSLITENMDKLTKQEEYQELVDKDPRLVVGIYEAYLVKQVNT 241
             +AF+  HNAK++ EA+LSLIT+NMDKLTK+EEY+ELV+KDPRLVV IYEAYL KQVNT
Sbjct: 201 PSYAFAHLHNAKHMTEAALSLITDNMDKLTKREEYKELVEKDPRLVVEIYEAYLSKQVNT 260

Query: 240 AAAK 229
           AA +
Sbjct: 261 AAPR 264


>ref|XP_002300959.1| predicted protein [Populus trichocarpa] gi|222842685|gb|EEE80232.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  298 bits (762), Expect = 2e-78
 Identities = 163/247 (65%), Positives = 192/247 (77%), Gaps = 10/247 (4%)
 Frame = -2

Query: 936 MKCISCREEYGAREAGTCKXXXXXXXXXXXXXXXXXXELKAKVSFLKFSSPID----HRS 769
           M+CISC+E Y   +AGTCK                  +LKAKV+FL+F SP+D    HRS
Sbjct: 24  MRCISCKEYYSRCDAGTCKECYEEASDTEEELKREIEDLKAKVAFLRFWSPLDLHITHRS 83

Query: 768 SS--CFTDVLLVAS--DGVVNEIGSPSVS--AHKAILASRSPVFKAMLENEMEESRSGTI 607
            +  CFTDV+L+AS  DG    IG+PSV   AHKA+L SRSPVFKAMLENEMEESRSGTI
Sbjct: 84  PAGPCFTDVVLIASSDDGF---IGTPSVPVPAHKAVLVSRSPVFKAMLENEMEESRSGTI 140

Query: 606 KISEVTYDALRSFVQYLYTAEVSLDEQMACDLLVLAEKYQVKHLKSHCETFLTSKLNAEN 427
           KIS+V+YDALRSFV YLYTAE  LDEQMACDLLVLAEKY+VKHLK++CE FL SKLN +N
Sbjct: 141 KISDVSYDALRSFVNYLYTAEACLDEQMACDLLVLAEKYEVKHLKAYCEKFLVSKLNWDN 200

Query: 426 AFMCFAFSSQHNAKNLHEASLSLITENMDKLTKQEEYQELVDKDPRLVVGIYEAYLVKQV 247
           + M +AF+ QHNAK++ E +LSLIT+NMDKLTK++EY ELV++DPRLVV IYEAYL KQV
Sbjct: 201 SVMSYAFAHQHNAKHMLETALSLITDNMDKLTKRKEYIELVEEDPRLVVEIYEAYLSKQV 260

Query: 246 NTAAAKD 226
           NTAA KD
Sbjct: 261 NTAAHKD 267


>ref|XP_002285888.1| PREDICTED: BTB/POZ domain-containing protein At4g08455-like [Vitis
           vinifera]
          Length = 264

 Score =  296 bits (757), Expect = 8e-78
 Identities = 158/243 (65%), Positives = 186/243 (76%)
 Frame = -2

Query: 954 ETVVVKMKCISCREEYGAREAGTCKXXXXXXXXXXXXXXXXXXELKAKVSFLKFSSPIDH 775
           ET    M+CISCRE+YG  +AGTCK                  ELKAKV+FL+ SSP+DH
Sbjct: 18  ETETELMRCISCREDYGRIDAGTCKECYEEASETEEELKREIEELKAKVAFLRCSSPLDH 77

Query: 774 RSSSCFTDVLLVASDGVVNEIGSPSVSAHKAILASRSPVFKAMLENEMEESRSGTIKISE 595
                F+DV+LVAS+       +P V AHK++LASRSPVFKAMLENEMEES SGTIKIS+
Sbjct: 78  SHRRSFSDVILVASNDDSAASAAP-VPAHKSVLASRSPVFKAMLENEMEESLSGTIKISD 136

Query: 594 VTYDALRSFVQYLYTAEVSLDEQMACDLLVLAEKYQVKHLKSHCETFLTSKLNAENAFMC 415
           V+Y+ALR FV YLYTAE  LDE MACDLLVLAEKYQVKHLK++CE F+ SKLN +N+ + 
Sbjct: 137 VSYEALRCFVNYLYTAEACLDEPMACDLLVLAEKYQVKHLKAYCEKFMVSKLNWDNSVIS 196

Query: 414 FAFSSQHNAKNLHEASLSLITENMDKLTKQEEYQELVDKDPRLVVGIYEAYLVKQVNTAA 235
           FAF+ QHNAK L +A+LS+IT+NMDKLTK+EEY ELV+KDPRLVV IYEAYL KQVNTAA
Sbjct: 197 FAFAHQHNAKLLIDAALSVITDNMDKLTKREEYIELVEKDPRLVVEIYEAYLSKQVNTAA 256

Query: 234 AKD 226
            KD
Sbjct: 257 HKD 259


>ref|NP_680660.2| BTB/POZ domain-containing protein [Arabidopsis thaliana]
           gi|75254656|sp|Q6DBN1.1|Y4845_ARATH RecName:
           Full=BTB/POZ domain-containing protein At4g08455
           gi|50198819|gb|AAT70442.1| At4g08455 [Arabidopsis
           thaliana] gi|56381961|gb|AAV85699.1| At4g08455
           [Arabidopsis thaliana] gi|332657244|gb|AEE82644.1|
           BTB/POZ domain-containing protein [Arabidopsis thaliana]
          Length = 243

 Score =  295 bits (754), Expect = 2e-77
 Identities = 153/237 (64%), Positives = 185/237 (78%), Gaps = 3/237 (1%)
 Frame = -2

Query: 936 MKCISCREEYGAREAGTCKXXXXXXXXXXXXXXXXXXELKAKVSFLKFSSPIDHRSSSC- 760
           M+CISCREEY  R AGTCK                  +LKAKV+FL+ SS +DH +SS  
Sbjct: 1   MRCISCREEYLPRNAGTCKECYVEAGETEEELKREIDDLKAKVAFLRLSSSLDHGTSSTS 60

Query: 759 --FTDVLLVASDGVVNEIGSPSVSAHKAILASRSPVFKAMLENEMEESRSGTIKISEVTY 586
             FTDV+L+AS+   +  GSP + AHK++L SRSPVFKAMLENEMEES SGTIKIS+V+Y
Sbjct: 61  RSFTDVVLIASE---DNAGSPPIPAHKSVLVSRSPVFKAMLENEMEESLSGTIKISDVSY 117

Query: 585 DALRSFVQYLYTAEVSLDEQMACDLLVLAEKYQVKHLKSHCETFLTSKLNAENAFMCFAF 406
           DALR+FV YLYTAE  LDEQMACDLLV++EKYQVKHLKS+CE FL +KL+ +N+ M +AF
Sbjct: 118 DALRTFVYYLYTAEACLDEQMACDLLVMSEKYQVKHLKSYCERFLVTKLSPDNSLMTYAF 177

Query: 405 SSQHNAKNLHEASLSLITENMDKLTKQEEYQELVDKDPRLVVGIYEAYLVKQVNTAA 235
           + QHNAK++ +A+LS I ENMDKLTK+EEY ELV+KDPRL+V IYEAYL KQVNTAA
Sbjct: 178 AHQHNAKHVLDAALSQIVENMDKLTKREEYMELVEKDPRLIVEIYEAYLSKQVNTAA 234


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