BLASTX nr result
ID: Coptis24_contig00017923
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017923 (797 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK37781.1| unknown [Lotus japonicus] 82 1e-13 ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g... 76 1e-11 ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|2... 75 2e-11 ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|2... 75 2e-11 ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23... 74 4e-11 >gb|AFK37781.1| unknown [Lotus japonicus] Length = 489 Score = 82.4 bits (202), Expect = 1e-13 Identities = 60/182 (32%), Positives = 87/182 (47%), Gaps = 18/182 (9%) Frame = +1 Query: 304 GLLCFSEDQYKCSYPVFYYICNPITGEHIRLPRAREL-----FHVE--VSAFGFDSTTNE 462 GL+C + + ++ +CNPITGE IRLP+ + F ++ + FGF NE Sbjct: 183 GLICLCDRERD-----YFVVCNPITGEFIRLPQTSRIGKTNKFSIQEIYAGFGFQPKNNE 237 Query: 463 YKVIR------FHYDRDEGEVYTLGSSRWRRINYGVPYETFRH-PFGMLVSNHLHWISSG 621 YKV+R F++ EV+TLG+S WR + Y F H F VS LHWI S Sbjct: 238 YKVVRILRGLQFYHGIMAAEVHTLGTSTWRNVEVNSMY--FYHLRFPTCVSGALHWIGSY 295 Query: 622 DGVPLTIVAFDMAAEEVHQIEPPPLVSTDIKSSLGVIEER----LCFFRKLGDKYYEIWV 789 G L+I+ FD +E PP + S+ + E R +C G + +W+ Sbjct: 296 HGT-LSILCFDFESERFRSFPTPPCLYQSCTESITMGELRGSLYICDSFSKGTPFV-MWI 353 Query: 790 MK 795 MK Sbjct: 354 MK 355 >ref|XP_002320506.1| f-box family protein [Populus trichocarpa] gi|222861279|gb|EEE98821.1| f-box family protein [Populus trichocarpa] Length = 422 Score = 75.9 bits (185), Expect = 1e-11 Identities = 61/185 (32%), Positives = 85/185 (45%), Gaps = 21/185 (11%) Frame = +1 Query: 304 GLLCFSEDQYKCSYPVFYYICNPITGEHIRLPRARELFHVEV-SAFGFDSTTNEYKVIRF 480 GLLC S+ Y S YI NP TG + LP++ + EV S FGF+ T EYKVIR Sbjct: 130 GLLCLSDSLYNDSL----YIYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKTKEYKVIRI 185 Query: 481 HYDRD----------------EGEVYTLGSSRWRRINYGVPYETFRHPFGMLVSNHLHWI 612 Y R+ E ++ TLG WR + V Y R G LV+ LHWI Sbjct: 186 VYYRNGHGGYPRSRRIIYPLSEVQILTLGCPEWRSLG-KVSYRLVRRASGALVNGRLHWI 244 Query: 613 S--SGDGVPLTIVAFDMAAEEVHQIEPPPLVSTDIKSSLGVIEERLCFFRKLGDKY--YE 780 S + +V+FD+ E+ ++ P + + + ++ R C + Y E Sbjct: 245 SRPCRNKPARRLVSFDLTDEQFREVSKPDCGGLN-RCNYHLVVLRGCLSAAVYCNYGRLE 303 Query: 781 IWVMK 795 IWVMK Sbjct: 304 IWVMK 308 >ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|222871558|gb|EEF08689.1| predicted protein [Populus trichocarpa] Length = 452 Score = 75.1 bits (183), Expect = 2e-11 Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 15/179 (8%) Frame = +1 Query: 304 GLLCFSEDQYKCSYPVFYYICNPITGEHIRLPRA--RELFHVEVSAFGFDSTTNEYKVIR 477 GLLC S+ S+ Y +CNPI GE+I +P A + H + G+ + T EYKV+ Sbjct: 132 GLLCISKTFQDGSHDDIY-LCNPILGEYISIPLAAGQGTRHKRSFSLGYSAITKEYKVLH 190 Query: 478 FHYDR------DEGEVYTLGSSRWRRINYGVPYETFRHPFGMLVSNHLHWISSG-DGVPL 636 Y + E E+YT+G+ +WR I+ + F V +HW G D Sbjct: 191 TFYSKKGPDSQPEAEIYTIGTGKWRSIHKALHILDI-FMFDSFVCGSIHWELRGEDNCVN 249 Query: 637 TIVAFDMAAEEVHQIEPPP------LVSTDIKSSLGVIEERLCFFRKLGDKYYEIWVMK 795 +I +F+ E+ Q+ PP + T + LGV FF + +EIWVMK Sbjct: 250 SIGSFNFENEQFSQLSLPPRYDEGGVTLTVFEGCLGV-----SFFNTCCETQFEIWVMK 303 >ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|222860326|gb|EEE97873.1| predicted protein [Populus trichocarpa] Length = 410 Score = 74.7 bits (182), Expect = 2e-11 Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 20/184 (10%) Frame = +1 Query: 304 GLLCFSEDQYKCSYPVFYYICNPITGEHIRLP--------RARELFHVEVSAFGFDSTTN 459 GLLC + K +Y+CNP+TGEH+R P R + + V FGF +N Sbjct: 133 GLLCLFDKNSK----KVFYLCNPVTGEHVRTPANCKKEKQRGKTILDA-VLGFGFSPKSN 187 Query: 460 EYKVIRFHYD---------RDEGEVYTLGSSRWRRINYGVPYETFRHPFGMLVSNHLHWI 612 Y V+R R EGE+ G + W+ I +P+ + FG+ ++ LHWI Sbjct: 188 HYMVLRITRKKLTYPISILRSEGEICIFGDNEWKSIG-EIPFPDCKKFFGVSLNGALHWI 246 Query: 613 SSGDGVPLT--IVAFDMAAEEVHQIEPPPLVSTD-IKSSLGVIEERLCFFRKLGDKYYEI 783 + D I A D+ ++++ + PP D + +LGV+ + L + +I Sbjct: 247 LNLDDYEDADLICALDIDSKKIRPMSPPNGFRRDTTEMTLGVLRDCLFICDSMTLYNLDI 306 Query: 784 WVMK 795 WVMK Sbjct: 307 WVMK 310 >ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max] Length = 393 Score = 73.9 bits (180), Expect = 4e-11 Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 12/176 (6%) Frame = +1 Query: 304 GLLCFSEDQYKCSYPVFYYICNPITGEHIRLP---RARELFHVEVSAFGFDSTTNEYKVI 474 G+LCF+ DQ + + NP G+ +LP R + FG+D + YKV+ Sbjct: 148 GILCFAVDQRRA------LLWNPSIGKFKKLPPLDNERRNGSYTIHGFGYDRFADSYKVV 201 Query: 475 R-FHYDRD-----EGEVYTLGSSRWRRINY---GVPYETFRHPFGMLVSNHLHWISSGDG 627 F Y+ D + +V TLG+ WRRI G+P++ G VS ++W++S D Sbjct: 202 AIFCYECDGRYETQVKVLTLGTDSWRRIQEFPSGLPFDES----GKFVSGTVNWLASNDS 257 Query: 628 VPLTIVAFDMAAEEVHQIEPPPLVSTDIKSSLGVIEERLCFFRKLGDKYYEIWVMK 795 L IV+ D+ E ++ P + +LGV+ + LC D + ++W+MK Sbjct: 258 SSLIIVSLDLHKESYEEVLQPYYGVAVVNLTLGVLRDCLCVLSH-ADTFLDVWLMK 312