BLASTX nr result

ID: Coptis24_contig00017922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017922
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532961.1| PREDICTED: uncharacterized protein LOC100780...   196   1e-48
ref|XP_002271130.1| PREDICTED: uncharacterized protein LOC100266...   195   3e-48
emb|CAN82911.1| hypothetical protein VITISV_015280 [Vitis vinifera]   195   3e-48
ref|XP_003547079.1| PREDICTED: pumilio homolog 2-like [Glycine max]   194   5e-48
ref|XP_003524740.1| PREDICTED: putative pumilio homolog 7, chlor...   194   6e-48

>ref|XP_003532961.1| PREDICTED: uncharacterized protein LOC100780898 [Glycine max]
          Length = 763

 Score =  196 bits (499), Expect = 1e-48
 Identities = 93/133 (69%), Positives = 115/133 (86%)
 Frame = +2

Query: 2   KDQQGCRLLQQKFDEGSPQDKQMIFQELIDHVVELMTNQFGNYLVQKLLEKCNAEQRMKI 181
           KDQ GCR LQ+ FDEG+P+D Q+IF E+IDHV ELM N FGNYL+QKLL+ C+ +QRM+I
Sbjct: 454 KDQHGCRFLQRIFDEGTPEDVQVIFNEIIDHVAELMMNPFGNYLMQKLLDVCDEKQRMQI 513

Query: 182 LLMVTKTPGELVRISLNMHGTRAVQKLISTLKTQQEKLIVISALEPGFLDLIKDLNGNHV 361
           +LMVT+ PG+LVRISLN+HGTR VQKLI TLKT+Q+  +V++ALEPGFL LIKDLNGNHV
Sbjct: 514 ILMVTEEPGQLVRISLNIHGTRVVQKLIETLKTRQQISLVVAALEPGFLALIKDLNGNHV 573

Query: 362 LQYCLQNLENEEN 400
           +Q+CLQ L NE+N
Sbjct: 574 VQHCLQCLSNEDN 586


>ref|XP_002271130.1| PREDICTED: uncharacterized protein LOC100266352 [Vitis vinifera]
          Length = 810

 Score =  195 bits (496), Expect = 3e-48
 Identities = 97/133 (72%), Positives = 111/133 (83%)
 Frame = +2

Query: 2   KDQQGCRLLQQKFDEGSPQDKQMIFQELIDHVVELMTNQFGNYLVQKLLEKCNAEQRMKI 181
           KDQ GCR LQ+ FDEG+PQD Q+IF E+IDHVVELM N FGNYL+QKLL+ CN EQRM+I
Sbjct: 501 KDQHGCRFLQRMFDEGTPQDVQIIFNEIIDHVVELMMNPFGNYLMQKLLDVCNEEQRMQI 560

Query: 182 LLMVTKTPGELVRISLNMHGTRAVQKLISTLKTQQEKLIVISALEPGFLDLIKDLNGNHV 361
           L+M+T+  GELVRISLN HGTR VQKLI TLKT+Q+   VISALEPGFL LIKDLNGNHV
Sbjct: 561 LVMLTEESGELVRISLNTHGTRVVQKLIETLKTRQQISRVISALEPGFLALIKDLNGNHV 620

Query: 362 LQYCLQNLENEEN 400
           +Q CLQ L  E+N
Sbjct: 621 IQRCLQCLSKEDN 633


>emb|CAN82911.1| hypothetical protein VITISV_015280 [Vitis vinifera]
          Length = 773

 Score =  195 bits (496), Expect = 3e-48
 Identities = 97/133 (72%), Positives = 111/133 (83%)
 Frame = +2

Query: 2   KDQQGCRLLQQKFDEGSPQDKQMIFQELIDHVVELMTNQFGNYLVQKLLEKCNAEQRMKI 181
           KDQ GCR LQ+ FDEG+PQD Q+IF E+IDHVVELM N FGNYL+QKLL+ CN EQRM+I
Sbjct: 340 KDQHGCRFLQRMFDEGTPQDVQIIFNEIIDHVVELMMNPFGNYLMQKLLDVCNEEQRMQI 399

Query: 182 LLMVTKTPGELVRISLNMHGTRAVQKLISTLKTQQEKLIVISALEPGFLDLIKDLNGNHV 361
           L+M+T+  GELVRISLN HGTR VQKLI TLKT+Q+   VISALEPGFL LIKDLNGNHV
Sbjct: 400 LVMLTEESGELVRISLNTHGTRVVQKLIETLKTRQQISRVISALEPGFLALIKDLNGNHV 459

Query: 362 LQYCLQNLENEEN 400
           +Q CLQ L  E+N
Sbjct: 460 IQRCLQCLSKEDN 472


>ref|XP_003547079.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 770

 Score =  194 bits (494), Expect = 5e-48
 Identities = 92/133 (69%), Positives = 114/133 (85%)
 Frame = +2

Query: 2   KDQQGCRLLQQKFDEGSPQDKQMIFQELIDHVVELMTNQFGNYLVQKLLEKCNAEQRMKI 181
           KDQ GCR LQ+ FDEG+P+D Q+IF E+IDHVVELM N FGNYL+QKLL+ C+  QRM++
Sbjct: 461 KDQHGCRFLQRIFDEGTPEDVQVIFNEIIDHVVELMMNPFGNYLMQKLLDVCDENQRMQM 520

Query: 182 LLMVTKTPGELVRISLNMHGTRAVQKLISTLKTQQEKLIVISALEPGFLDLIKDLNGNHV 361
           +LMVT+ PG+LVRISLN HGTR VQK+I TLKT+Q+  +V++ALEPGFL LIKDLNGNHV
Sbjct: 521 ILMVTEEPGQLVRISLNTHGTRVVQKVIETLKTRQQISLVVAALEPGFLALIKDLNGNHV 580

Query: 362 LQYCLQNLENEEN 400
           +Q+CLQ L NE+N
Sbjct: 581 VQHCLQCLSNEDN 593


>ref|XP_003524740.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
           max]
          Length = 451

 Score =  194 bits (493), Expect = 6e-48
 Identities = 93/133 (69%), Positives = 111/133 (83%)
 Frame = +2

Query: 2   KDQQGCRLLQQKFDEGSPQDKQMIFQELIDHVVELMTNQFGNYLVQKLLEKCNAEQRMKI 181
           KDQ GCR LQ+ FDEG+P+D  MIF E+IDHVVELM N FGNYL+QKLL+ CN EQRM+I
Sbjct: 142 KDQHGCRFLQKMFDEGTPEDVLMIFNEIIDHVVELMMNPFGNYLMQKLLDVCNEEQRMQI 201

Query: 182 LLMVTKTPGELVRISLNMHGTRAVQKLISTLKTQQEKLIVISALEPGFLDLIKDLNGNHV 361
           LL++T+ PG+LVRISLN HGTR VQKL+ TLKT+Q+  + +SALEPGFL LIKDLNGNHV
Sbjct: 202 LLIITEEPGQLVRISLNTHGTRVVQKLVETLKTRQQISLAVSALEPGFLALIKDLNGNHV 261

Query: 362 LQYCLQNLENEEN 400
           +Q CL  L NE+N
Sbjct: 262 VQRCLLCLSNEDN 274



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/132 (26%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
 Frame = +2

Query: 8   QQGCRLLQQKFDEGSPQDKQMIFQELIDHVVELMTNQFGNYLVQKLLEKCNAEQRMKILL 187
           Q GC +LQ+     S + ++ +  E+  + + L  +QFGNY+VQ +L+       +KI  
Sbjct: 292 QHGCCVLQRCIGHSSGEYREKLIAEICANALLLAQDQFGNYVVQFILD-------LKISS 344

Query: 188 MVT----KTPGELVRISLNMHGTRAVQKLISTLKTQQEKLIVISALE-PGFLDLIKDLNG 352
           + T    +  G  V +S    G+  V+K ++    +    +++  L  P F  L++D + 
Sbjct: 345 VTTCIRLQFEGNYVHLSRQKFGSHVVEKCLAAFNDENRSRVILELLSTPHFEHLLQDPHA 404

Query: 353 NHVLQYCLQNLE 388
           N+V+Q  L++ E
Sbjct: 405 NYVVQSALRHSE 416


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