BLASTX nr result

ID: Coptis24_contig00017914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017914
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08200493.1| hypothetical protein NBCG_05699 [Nocardioidac...    90   2e-16
ref|ZP_06706815.1| hypothetical protein SSTG_00255 [Streptomyces...    88   8e-16
ref|ZP_09369757.1| hypothetical protein HMPREF0975_01540 [Actino...    85   5e-15
ref|ZP_07286019.1| conserved hypothetical protein [Streptomyces ...    84   9e-15
ref|ZP_06710336.1| hypothetical protein SSTG_03777 [Streptomyces...    84   2e-14

>ref|ZP_08200493.1| hypothetical protein NBCG_05699 [Nocardioidaceae bacterium Broad-1]
           gi|325947935|gb|EGD40054.1| hypothetical protein
           NBCG_05699 [Nocardioidaceae bacterium Broad-1]
          Length = 86

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/67 (67%), Positives = 52/67 (77%)
 Frame = +1

Query: 34  MWPVTLSGRLPVKALVSHYPTNKLISRESIPNRRNFPTPTMQQELLSGISPSFLKLSQSQ 213
           MWPVTLSGRLPV+ALVSHY TNKLI RE IP R+ F    MQ+ ++SGI+  F  LSQS 
Sbjct: 1   MWPVTLSGRLPVEALVSHYLTNKLIGREHIPGRKTFHNHPMQEVVVSGINHRFRWLSQSL 60

Query: 214 GQVTHVL 234
           GQ+THVL
Sbjct: 61  GQITHVL 67


>ref|ZP_06706815.1| hypothetical protein SSTG_00255 [Streptomyces sp. e14]
           gi|292831588|gb|EFF89937.1| hypothetical protein
           SSTG_00255 [Streptomyces sp. e14]
          Length = 86

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/67 (65%), Positives = 50/67 (74%)
 Frame = +1

Query: 34  MWPVTLSGRLPVKALVSHYPTNKLISRESIPNRRNFPTPTMQQELLSGISPSFLKLSQSQ 213
           MWPV LSGRLPV ALVSHY TNKLI R  I +RR+FP   M + L+SGI P F  LSQS+
Sbjct: 1   MWPVALSGRLPVVALVSHYLTNKLIGRGLILHRRSFPASKMPRRLVSGIRPRFQGLSQSE 60

Query: 214 GQVTHVL 234
           GQ+ HVL
Sbjct: 61  GQIAHVL 67


>ref|ZP_09369757.1| hypothetical protein HMPREF0975_01540 [Actinomyces sp. oral taxon
           849 str. F0330] gi|365264633|gb|EHM94433.1| hypothetical
           protein HMPREF0975_01540 [Actinomyces sp. oral taxon 849
           str. F0330]
          Length = 255

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/72 (58%), Positives = 53/72 (73%), Gaps = 5/72 (6%)
 Frame = +1

Query: 34  MWPVTLSGRLPVKALVSHYPTNKLISRESIPNRR-----NFPTPTMQQELLSGISPSFLK 198
           MWP TLSGRLPV ALV H+PTNKLI RE IP+R+     +FP P   +  +  ISP+F++
Sbjct: 1   MWPSTLSGRLPVTALVGHHPTNKLIGREPIPHRKHPKAQSFPNPPCDRPGIPRISPTFMR 60

Query: 199 LSQSQGQVTHVL 234
           LS+ +GQVTHVL
Sbjct: 61  LSRRRGQVTHVL 72


>ref|ZP_07286019.1| conserved hypothetical protein [Streptomyces sp. C]
           gi|302442572|gb|EFL14388.1| conserved hypothetical
           protein [Streptomyces sp. C]
          Length = 84

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 43/65 (66%), Positives = 48/65 (73%)
 Frame = +1

Query: 40  PVTLSGRLPVKALVSHYPTNKLISRESIPNRRNFPTPTMQQELLSGISPSFLKLSQSQGQ 219
           PV LSGRLPV ALV HYPTNKLI R  I +RR+F  P MQ  +LSGI P F  LSQS+GQ
Sbjct: 1   PVALSGRLPVVALVGHYPTNKLIGRGLILHRRSFQLPPMQAGVLSGIRPRFQGLSQSEGQ 60

Query: 220 VTHVL 234
           + HVL
Sbjct: 61  IAHVL 65


>ref|ZP_06710336.1| hypothetical protein SSTG_03777 [Streptomyces sp. e14]
           gi|292835109|gb|EFF93458.1| hypothetical protein
           SSTG_03777 [Streptomyces sp. e14]
          Length = 86

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/67 (64%), Positives = 48/67 (71%)
 Frame = +1

Query: 34  MWPVTLSGRLPVKALVSHYPTNKLISRESIPNRRNFPTPTMQQELLSGISPSFLKLSQSQ 213
           MWPV LSGRLPV ALVS Y TNKLI R  I +RR+FP   M   L+SGI P F  LSQS+
Sbjct: 1   MWPVALSGRLPVVALVSRYLTNKLIGRGLILHRRSFPASKMPWRLVSGIRPRFQGLSQSE 60

Query: 214 GQVTHVL 234
           GQ+ HVL
Sbjct: 61  GQIAHVL 67


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