BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017907
         (1018 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152698.1| PREDICTED: tRNA wybutosine-synthesizing prot...   332   7e-89
ref|XP_002301868.1| predicted protein [Populus trichocarpa] gi|2...   306   4e-81
gb|AEQ61825.1| flavodoxin family protein [Dimocarpus longan]          298   2e-78
dbj|BAD95445.1| hypothetical protein [Arabidopsis thaliana]           297   3e-78
ref|NP_177656.2| tRNA wybutosine-synthesizing protein 1-like pro...   297   3e-78

>ref|XP_004152698.1| PREDICTED: tRNA wybutosine-synthesizing protein 1 homolog [Cucumis
           sativus]
          Length = 640

 Score =  332 bits (852), Expect = 7e-89
 Identities = 173/304 (56%), Positives = 208/304 (68%)
 Frame = -2

Query: 912 YCFYKSHHLKKKSPSISQNPNPKTNKIFYISQTGTSKTLANRLLELFNLNANHFNFDIVD 733
           YCFYKS  L+K   S++     +  K+F+ISQTGTSK LA+RLL +  LN+N   FD+VD
Sbjct: 22  YCFYKSRRLRKLKLSLNPTLPSRKPKLFFISQTGTSKALAHRLLNV--LNSNGLVFDLVD 79

Query: 732 IKDYEPEDLLKETLVLFVVSTWDDGKCPQTCRFFENWLNESAEDFRVGSLILSQCRFGVF 553
            KDYEPEDL KETLVLFV STW+DG  P   +F  NWL+ESAEDFRVGSL+LSQC+F VF
Sbjct: 80  PKDYEPEDLFKETLVLFVASTWEDGGPPPHAKFLANWLSESAEDFRVGSLLLSQCKFSVF 139

Query: 552 GVGSKGYGESYNAVGKEFAKXXXXXXXXXXXXXXXGDVDSGDLEQVFEVWSEKLVRVLKX 373
           GVGS+ YGE++NAV ++F+K               GDVD GD+++ F+ WS KL++V+K 
Sbjct: 140 GVGSRVYGETFNAVARDFSKRLKALGAKEILPIGEGDVDGGDIDKCFDDWSRKLLKVMKF 199

Query: 372 XXXXXXXXXXXXGLVXXXXXXXXXXXXXXXXXXDTEIVDLEDIAGKGPSRKANSVFAPVK 193
                                            + +IVDLEDIAGKGPSRK+ ++     
Sbjct: 200 DAEGNGVELCSGIAGDSDAVSVEEDEEEDDDLGEEDIVDLEDIAGKGPSRKSTNIVETNG 259

Query: 192 KVSNGVKEMVTPIIRTSLEKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESHR 13
           K+ NG K MVTP+IR SLEKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESHR
Sbjct: 260 KL-NGKKVMVTPVIRASLEKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESHR 318

Query: 12  CMEA 1
           CMEA
Sbjct: 319 CMEA 322


>ref|XP_002301868.1| predicted protein [Populus trichocarpa] gi|222843594|gb|EEE81141.1|
           predicted protein [Populus trichocarpa]
          Length = 592

 Score =  306 bits (785), Expect = 4e-81
 Identities = 162/286 (56%), Positives = 200/286 (69%), Gaps = 7/286 (2%)
 Frame = -2

Query: 837 KIFYISQTGTSKTLANRLLELFNLNANHFNFDIVDIKDYEPEDLLKETLVLFVVSTWDDG 658
           K+F+ISQTGTSKTLA+RL  L  L +N+ +FD++D ++YEPEDL KE LV+ + STW+DG
Sbjct: 1   KLFFISQTGTSKTLAHRLHNL--LASNNLHFDLIDPQNYEPEDLFKEKLVIIIASTWEDG 58

Query: 657 KCPQTCRFFENWLNESAEDFRVGSLILSQCRFGVFGVGSKGYGESYNAVGKEFAKXXXXX 478
           K PQ  +FF NWL ESA+DFRVGSL+LS+C+F VFGVGS+ YGE++NAV K+F++     
Sbjct: 59  KPPQNAKFFANWLAESADDFRVGSLMLSECKFAVFGVGSRAYGETFNAVAKDFSRRLRDL 118

Query: 477 XXXXXXXXXXGDVDSGDLEQVFEVWSEKLVRVLKXXXXXXXXXXXXXGLVXXXXXXXXXX 298
                     GDVD G+L+ VFE WS +L RVLK              +V          
Sbjct: 119 GAKEVVGVGEGDVDGGELDGVFEEWSGRLARVLKGESVENGEVCGNGVVV-----IDESD 173

Query: 297 XXXXXXXXDTEIVDLEDIAGKGPSRKANSVFAPVKKVS------NGVKEMVTPIIRTSLE 136
                   +++I+DLEDIAGKGPSR++ +V     K++      NG KEMVTP+IR SLE
Sbjct: 174 DDEDDGGVESDIIDLEDIAGKGPSRRSLAVAQSNGKLNGENGKLNGQKEMVTPVIRASLE 233

Query: 135 KQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESH-RCMEA 1
           KQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESH RCMEA
Sbjct: 234 KQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESHSRCMEA 279


>gb|AEQ61825.1| flavodoxin family protein [Dimocarpus longan]
          Length = 640

 Score =  298 bits (762), Expect = 2e-78
 Identities = 162/308 (52%), Positives = 200/308 (64%), Gaps = 4/308 (1%)
 Frame = -2

Query: 912 YCFYKSHHLKKKSPSISQNP----NPKTNKIFYISQTGTSKTLANRLLELFNLNANHFNF 745
           Y  YKS  L K   ++S  P    NP+  K+FYISQTGT +TLA RL     L A    F
Sbjct: 21  YFVYKSRRLNKLL-NLSLTPKTPQNPRNGKLFYISQTGTCRTLAKRLHS--RLTALGLPF 77

Query: 744 DIVDIKDYEPEDLLKETLVLFVVSTWDDGKCPQTCRFFENWLNESAEDFRVGSLILSQCR 565
           D+VD ++YEPEDL  ETLVL V STW+DGK P   +FF +WL ESA DFRVGSL+LS C+
Sbjct: 78  DLVDPRNYEPEDLPNETLVLIVASTWEDGKPPDAAKFFADWLTESATDFRVGSLLLSHCK 137

Query: 564 FGVFGVGSKGYGESYNAVGKEFAKXXXXXXXXXXXXXXXGDVDSGDLEQVFEVWSEKLVR 385
           F VFGVGS  Y +++NAV ++ ++               GDV+ G+L+ VFE WS+++V 
Sbjct: 138 FAVFGVGSSAYEKTFNAVARDLSEKMRGLGAAEIFPVVDGDVEDGELDAVFEDWSKRVVA 197

Query: 384 VLKXXXXXXXXXXXXXGLVXXXXXXXXXXXXXXXXXXDTEIVDLEDIAGKGPSRKANSVF 205
           V               G+                   ++E+VDLEDIAGKGPSR++ +V 
Sbjct: 198 V-SLGDVANGGVERVVGVESDDFDDGGDEDDDEEEEVESEVVDLEDIAGKGPSRRSVNVA 256

Query: 204 APVKKVSNGVKEMVTPIIRTSLEKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGI 25
              +K+S+G + MVTP+IR SLEKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGI
Sbjct: 257 ETNRKLSDGKRNMVTPVIRASLEKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGI 316

Query: 24  ESHRCMEA 1
           ESHRCMEA
Sbjct: 317 ESHRCMEA 324


>dbj|BAD95445.1| hypothetical protein [Arabidopsis thaliana]
          Length = 433

 Score =  297 bits (760), Expect = 3e-78
 Identities = 169/308 (54%), Positives = 192/308 (62%), Gaps = 5/308 (1%)
 Frame = -2

Query: 912 YCFYKSH---HLKKKSPSISQNPNPKTNKIFYISQTGTSKTLANRLLELFNLNANHFNFD 742
           YC +K     HLK  S + S        KIF+ISQTGT+K LA RL EL    +N   FD
Sbjct: 23  YCIHKYRRLKHLKNLSLNPSSTLKASRGKIFFISQTGTAKALAQRLHEL--CASNDIAFD 80

Query: 741 IVDIKDYEPEDLLKETLVLFVVSTWDDGKCPQTCRFFENWLNESAEDFRVGSLILSQCRF 562
           IVD   YEPEDL KETLVLF+ STWD GK P+   F  NWL ESAEDFRVGSL+LS C+F
Sbjct: 81  IVDPHSYEPEDLPKETLVLFIASTWDGGKPPKNGEFLVNWLGESAEDFRVGSLLLSDCKF 140

Query: 561 GVFGVGSKGYGESYNAVGKEFAKXXXXXXXXXXXXXXXGDVDSGDLEQVFEVWSEKLVRV 382
            VFGVGS+ YGESYNAV KE +                GDVD G+L++ F+ W + ++RV
Sbjct: 141 AVFGVGSRAYGESYNAVAKELSSRMIGLGGLEMIPVGEGDVDDGELDRAFQDWCDGVIRV 200

Query: 381 LKXXXXXXXXXXXXXGLVXXXXXXXXXXXXXXXXXXDTE--IVDLEDIAGKGPSRKANSV 208
           LK                                  D +  IVDLEDIAGK PS++   V
Sbjct: 201 LKGGSAQETNGVSQQIGAVEDDLEYYDSTDEEDEDNDADGGIVDLEDIAGKAPSKRNGVV 260

Query: 207 FAPVKKVSNGVKEMVTPIIRTSLEKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYG 28
              V KV +G KEMVTP+IR SL KQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYG
Sbjct: 261 --KVTKV-DGKKEMVTPVIRASLTKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYG 317

Query: 27  IESHRCME 4
           IESHRCME
Sbjct: 318 IESHRCME 325


>ref|NP_177656.2| tRNA wybutosine-synthesizing protein 1-like protein [Arabidopsis
           thaliana] gi|75158883|sp|Q8RXN5.1|TYW1_ARATH RecName:
           Full=tRNA wybutosine-synthesizing protein 1 homolog
           gi|19423975|gb|AAL87267.1| unknown protein [Arabidopsis
           thaliana] gi|21281261|gb|AAM45053.1| unknown protein
           [Arabidopsis thaliana] gi|332197566|gb|AEE35687.1| tRNA
           wybutosine-synthesizing protein 1-like protein
           [Arabidopsis thaliana]
          Length = 647

 Score =  297 bits (760), Expect = 3e-78
 Identities = 169/308 (54%), Positives = 192/308 (62%), Gaps = 5/308 (1%)
 Frame = -2

Query: 912 YCFYKSH---HLKKKSPSISQNPNPKTNKIFYISQTGTSKTLANRLLELFNLNANHFNFD 742
           YC +K     HLK  S + S        KIF+ISQTGT+K LA RL EL    +N   FD
Sbjct: 23  YCIHKYRRLKHLKNLSLNPSSTLKASRGKIFFISQTGTAKALAQRLHEL--CASNDIAFD 80

Query: 741 IVDIKDYEPEDLLKETLVLFVVSTWDDGKCPQTCRFFENWLNESAEDFRVGSLILSQCRF 562
           IVD   YEPEDL KETLVLF+ STWD GK P+   F  NWL ESAEDFRVGSL+LS C+F
Sbjct: 81  IVDPHSYEPEDLPKETLVLFIASTWDGGKPPKNGEFLVNWLGESAEDFRVGSLLLSDCKF 140

Query: 561 GVFGVGSKGYGESYNAVGKEFAKXXXXXXXXXXXXXXXGDVDSGDLEQVFEVWSEKLVRV 382
            VFGVGS+ YGESYNAV KE +                GDVD G+L++ F+ W + ++RV
Sbjct: 141 AVFGVGSRAYGESYNAVAKELSSRMIGLGGLEMIPVGEGDVDDGELDRAFQDWCDGVIRV 200

Query: 381 LKXXXXXXXXXXXXXGLVXXXXXXXXXXXXXXXXXXDTE--IVDLEDIAGKGPSRKANSV 208
           LK                                  D +  IVDLEDIAGK PS++   V
Sbjct: 201 LKGGSAQETNGVSQQIGAVEDDLEYYDSTDEEDEDNDADGGIVDLEDIAGKAPSKRNGVV 260

Query: 207 FAPVKKVSNGVKEMVTPIIRTSLEKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYG 28
              V KV +G KEMVTP+IR SL KQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYG
Sbjct: 261 --KVTKV-DGKKEMVTPVIRASLTKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYG 317

Query: 27  IESHRCME 4
           IESHRCME
Sbjct: 318 IESHRCME 325