BLASTX nr result

ID: Coptis24_contig00017880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017880
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531080.1| PREDICTED: glycogen synthase-like [Glycine max]    65   6e-09
ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257...    65   7e-09
ref|XP_003524791.1| PREDICTED: uncharacterized protein LOC100788...    64   2e-08
ref|XP_002519725.1| starch synthase, putative [Ricinus communis]...    63   2e-08
emb|CAB40375.1| starch synthase, isoform V [Vigna unguiculata]         62   6e-08

>ref|XP_003531080.1| PREDICTED: glycogen synthase-like [Glycine max]
          Length = 873

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/47 (72%), Positives = 40/47 (85%)
 Frame = +1

Query: 160 DKNILLLK*ARVCTLEDLDKILIEKEALQEDVNTLEMRLAETDARIK 300
           +KNILLL  ARV +LEDL+KIL EKEALQ ++N LE RLAETDA+IK
Sbjct: 6   EKNILLLNEARVRSLEDLEKILAEKEALQGEINVLETRLAETDAQIK 52


>ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257130 [Vitis vinifera]
           gi|297740652|emb|CBI30834.3| unnamed protein product
           [Vitis vinifera]
          Length = 1011

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
 Frame = +1

Query: 85  MGVLFCSD*ECSQWRTCSTWGFDKN-DKNILLLK*ARVCTLEDLDKILIEKEALQEDVNT 261
           +G+   S  + S ++     G  KN +KNILLL  ARV  L+DL+KIL EK+ALQ ++N 
Sbjct: 128 LGINVKSGEQLSSFQLEDLVGMLKNAEKNILLLNQARVRALQDLEKILTEKDALQGEINI 187

Query: 262 LEMRLAETDARIK 300
           LEMRLAET+ARIK
Sbjct: 188 LEMRLAETNARIK 200


>ref|XP_003524791.1| PREDICTED: uncharacterized protein LOC100788308 [Glycine max]
          Length = 989

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/46 (69%), Positives = 38/46 (82%)
 Frame = +1

Query: 160 DKNILLLK*ARVCTLEDLDKILIEKEALQEDVNTLEMRLAETDARI 297
           +KNILLL  AR+   EDL+KIL+EKEALQ ++N LE RLAETDARI
Sbjct: 123 EKNILLLNEARIRACEDLEKILVEKEALQGEINVLETRLAETDARI 168


>ref|XP_002519725.1| starch synthase, putative [Ricinus communis]
           gi|223541142|gb|EEF42698.1| starch synthase, putative
           [Ricinus communis]
          Length = 998

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/47 (70%), Positives = 38/47 (80%)
 Frame = +1

Query: 160 DKNILLLK*ARVCTLEDLDKILIEKEALQEDVNTLEMRLAETDARIK 300
           +KNILLL  ARV  LEDL +IL EKE LQ ++N LEMRLAETDAR+K
Sbjct: 182 EKNILLLNQARVNALEDLQRILAEKEILQGEINILEMRLAETDARMK 228


>emb|CAB40375.1| starch synthase, isoform V [Vigna unguiculata]
          Length = 874

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/47 (68%), Positives = 38/47 (80%)
 Frame = +1

Query: 160 DKNILLLK*ARVCTLEDLDKILIEKEALQEDVNTLEMRLAETDARIK 300
           +KNILLL  ARV  LEDL+KIL EKEALQ ++N L MRLAE+D RI+
Sbjct: 6   EKNILLLNQARVHALEDLEKILAEKEALQGEINVLAMRLAESDVRIE 52


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