BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017869
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532046.1| pentatricopeptide repeat-containing protein,...   130   1e-28
ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
ref|NP_001048131.1| Os02g0750400 [Oryza sativa Japonica Group] g...   122   4e-26
gb|EAZ24630.1| hypothetical protein OsJ_08397 [Oryza sativa Japo...   122   4e-26
gb|EAY87542.1| hypothetical protein OsI_08951 [Oryza sativa Indi...   122   4e-26

>ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528289|gb|EEF30336.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 478

 Score =  130 bits (327), Expect = 1e-28
 Identities = 62/82 (75%), Positives = 72/82 (87%)
 Frame = +1

Query: 4   KEMHVSTLNAMLDAYCMNGLPAEADQLFEYAHKNGLLPDASTYKLLYKAYTKANMKELVQ 183
           KE+ VSTLNAMLD YC+NGLP EAD LF+ A   GLLPD++TYKLLYKAYTKANMK+LVQ
Sbjct: 378 KEVKVSTLNAMLDVYCLNGLPMEADLLFDNARNVGLLPDSTTYKLLYKAYTKANMKKLVQ 437

Query: 184 KLLKYMDNSGIVPNKKFFLEAL 249
           KLLK+MD  GI+PNK+FFL+AL
Sbjct: 438 KLLKHMDRDGIIPNKRFFLDAL 459


>ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Vitis vinifera]
           gi|296082481|emb|CBI21486.3| unnamed protein product
           [Vitis vinifera]
          Length = 489

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/83 (73%), Positives = 69/83 (83%)
 Frame = +1

Query: 1   KKEMHVSTLNAMLDAYCMNGLPAEADQLFEYAHKNGLLPDASTYKLLYKAYTKANMKELV 180
           KKEM VSTLNAML+ YCMNGLP EAD L E A KN   P +STYKLLYKAYTKA+ KEL+
Sbjct: 379 KKEMKVSTLNAMLEVYCMNGLPMEADLLLERARKNRPFPGSSTYKLLYKAYTKADQKELL 438

Query: 181 QKLLKYMDNSGIVPNKKFFLEAL 249
           +KLLK MD+ GI+PNK+FFLEAL
Sbjct: 439 EKLLKLMDSDGILPNKRFFLEAL 461


>ref|NP_001048131.1| Os02g0750400 [Oryza sativa Japonica Group]
           gi|46390206|dbj|BAD15637.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113537662|dbj|BAF10045.1| Os02g0750400 [Oryza
           sativa Japonica Group]
          Length = 211

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/83 (69%), Positives = 70/83 (84%)
 Frame = +1

Query: 1   KKEMHVSTLNAMLDAYCMNGLPAEADQLFEYAHKNGLLPDASTYKLLYKAYTKANMKELV 180
           +  +H+S++NAMLDAYCMNGLP EADQL +   K G +P ASTYKLLYKAYTKAN K+L+
Sbjct: 82  QNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPSASTYKLLYKAYTKANDKKLI 141

Query: 181 QKLLKYMDNSGIVPNKKFFLEAL 249
           QKLLK M++ GIVPNKKFFL+AL
Sbjct: 142 QKLLKRMNSQGIVPNKKFFLDAL 164


>gb|EAZ24630.1| hypothetical protein OsJ_08397 [Oryza sativa Japonica Group]
          Length = 482

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/83 (69%), Positives = 70/83 (84%)
 Frame = +1

Query: 1   KKEMHVSTLNAMLDAYCMNGLPAEADQLFEYAHKNGLLPDASTYKLLYKAYTKANMKELV 180
           +  +H+S++NAMLDAYCMNGLP EADQL +   K G +P ASTYKLLYKAYTKAN K+L+
Sbjct: 353 QNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPSASTYKLLYKAYTKANDKKLI 412

Query: 181 QKLLKYMDNSGIVPNKKFFLEAL 249
           QKLLK M++ GIVPNKKFFL+AL
Sbjct: 413 QKLLKRMNSQGIVPNKKFFLDAL 435


>gb|EAY87542.1| hypothetical protein OsI_08951 [Oryza sativa Indica Group]
          Length = 482

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/83 (69%), Positives = 70/83 (84%)
 Frame = +1

Query: 1   KKEMHVSTLNAMLDAYCMNGLPAEADQLFEYAHKNGLLPDASTYKLLYKAYTKANMKELV 180
           +  +H+S++NAMLDAYCMNGLP EADQL +   K G +P ASTYKLLYKAYTKAN K+L+
Sbjct: 353 QNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPSASTYKLLYKAYTKANDKKLI 412

Query: 181 QKLLKYMDNSGIVPNKKFFLEAL 249
           QKLLK M++ GIVPNKKFFL+AL
Sbjct: 413 QKLLKRMNSQGIVPNKKFFLDAL 435