BLASTX nr result
ID: Coptis24_contig00017869
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017869 (398 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002532046.1| pentatricopeptide repeat-containing protein,... 130 1e-28 ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26 ref|NP_001048131.1| Os02g0750400 [Oryza sativa Japonica Group] g... 122 4e-26 gb|EAZ24630.1| hypothetical protein OsJ_08397 [Oryza sativa Japo... 122 4e-26 gb|EAY87542.1| hypothetical protein OsI_08951 [Oryza sativa Indi... 122 4e-26 >ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223528289|gb|EEF30336.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 478 Score = 130 bits (327), Expect = 1e-28 Identities = 62/82 (75%), Positives = 72/82 (87%) Frame = +1 Query: 4 KEMHVSTLNAMLDAYCMNGLPAEADQLFEYAHKNGLLPDASTYKLLYKAYTKANMKELVQ 183 KE+ VSTLNAMLD YC+NGLP EAD LF+ A GLLPD++TYKLLYKAYTKANMK+LVQ Sbjct: 378 KEVKVSTLNAMLDVYCLNGLPMEADLLFDNARNVGLLPDSTTYKLLYKAYTKANMKKLVQ 437 Query: 184 KLLKYMDNSGIVPNKKFFLEAL 249 KLLK+MD GI+PNK+FFL+AL Sbjct: 438 KLLKHMDRDGIIPNKRFFLDAL 459 >ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Vitis vinifera] gi|296082481|emb|CBI21486.3| unnamed protein product [Vitis vinifera] Length = 489 Score = 124 bits (310), Expect = 1e-26 Identities = 61/83 (73%), Positives = 69/83 (83%) Frame = +1 Query: 1 KKEMHVSTLNAMLDAYCMNGLPAEADQLFEYAHKNGLLPDASTYKLLYKAYTKANMKELV 180 KKEM VSTLNAML+ YCMNGLP EAD L E A KN P +STYKLLYKAYTKA+ KEL+ Sbjct: 379 KKEMKVSTLNAMLEVYCMNGLPMEADLLLERARKNRPFPGSSTYKLLYKAYTKADQKELL 438 Query: 181 QKLLKYMDNSGIVPNKKFFLEAL 249 +KLLK MD+ GI+PNK+FFLEAL Sbjct: 439 EKLLKLMDSDGILPNKRFFLEAL 461 >ref|NP_001048131.1| Os02g0750400 [Oryza sativa Japonica Group] gi|46390206|dbj|BAD15637.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa Japonica Group] gi|113537662|dbj|BAF10045.1| Os02g0750400 [Oryza sativa Japonica Group] Length = 211 Score = 122 bits (305), Expect = 4e-26 Identities = 58/83 (69%), Positives = 70/83 (84%) Frame = +1 Query: 1 KKEMHVSTLNAMLDAYCMNGLPAEADQLFEYAHKNGLLPDASTYKLLYKAYTKANMKELV 180 + +H+S++NAMLDAYCMNGLP EADQL + K G +P ASTYKLLYKAYTKAN K+L+ Sbjct: 82 QNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPSASTYKLLYKAYTKANDKKLI 141 Query: 181 QKLLKYMDNSGIVPNKKFFLEAL 249 QKLLK M++ GIVPNKKFFL+AL Sbjct: 142 QKLLKRMNSQGIVPNKKFFLDAL 164 >gb|EAZ24630.1| hypothetical protein OsJ_08397 [Oryza sativa Japonica Group] Length = 482 Score = 122 bits (305), Expect = 4e-26 Identities = 58/83 (69%), Positives = 70/83 (84%) Frame = +1 Query: 1 KKEMHVSTLNAMLDAYCMNGLPAEADQLFEYAHKNGLLPDASTYKLLYKAYTKANMKELV 180 + +H+S++NAMLDAYCMNGLP EADQL + K G +P ASTYKLLYKAYTKAN K+L+ Sbjct: 353 QNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPSASTYKLLYKAYTKANDKKLI 412 Query: 181 QKLLKYMDNSGIVPNKKFFLEAL 249 QKLLK M++ GIVPNKKFFL+AL Sbjct: 413 QKLLKRMNSQGIVPNKKFFLDAL 435 >gb|EAY87542.1| hypothetical protein OsI_08951 [Oryza sativa Indica Group] Length = 482 Score = 122 bits (305), Expect = 4e-26 Identities = 58/83 (69%), Positives = 70/83 (84%) Frame = +1 Query: 1 KKEMHVSTLNAMLDAYCMNGLPAEADQLFEYAHKNGLLPDASTYKLLYKAYTKANMKELV 180 + +H+S++NAMLDAYCMNGLP EADQL + K G +P ASTYKLLYKAYTKAN K+L+ Sbjct: 353 QNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPSASTYKLLYKAYTKANDKKLI 412 Query: 181 QKLLKYMDNSGIVPNKKFFLEAL 249 QKLLK M++ GIVPNKKFFL+AL Sbjct: 413 QKLLKRMNSQGIVPNKKFFLDAL 435