BLASTX nr result

ID: Coptis24_contig00017860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017860
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18678.3| unnamed protein product [Vitis vinifera]               78   1e-13
ref|XP_002866252.1| glycerophosphoryl diester phosphodiesterase ...    77   2e-13
ref|XP_002866246.1| glycerophosphoryl diester phosphodiesterase ...    77   2e-13
ref|XP_002523503.1| glycerophosphoryl diester phosphodiesterase,...    69   2e-12
ref|NP_200625.1| protein SEUSS-like 5 [Arabidopsis thaliana] gi|...    74   2e-12

>emb|CBI18678.3| unnamed protein product [Vitis vinifera]
          Length = 756

 Score = 77.8 bits (190), Expect(2) = 1e-13
 Identities = 41/73 (56%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
 Frame = -2

Query: 213 IAFDFFSDPIIEIATYVQRLEVDGIVIEFPATATSYKRCPCTDTCSQNAPYNILLAEPQV 34
           IAFDFFSDP++E+ATYV RL +DG+V ++P TA +Y R PC+D  ++ A Y+IL AE   
Sbjct: 612 IAFDFFSDPVVELATYVGRLGIDGVVTDYPKTADAYLRSPCSDLNAKVA-YSILPAEAGA 670

Query: 33  LLAAAEVE--PPA 1
           LL  AE E  PPA
Sbjct: 671 LLGLAEPEVLPPA 683



 Score = 23.1 bits (48), Expect(2) = 1e-13
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 314 TDDGFVVNFTNVLHKMHSA 258
           T+ GF   FT V+ ++H+A
Sbjct: 578 TNGGFTTTFTTVVDELHAA 596


>ref|XP_002866252.1| glycerophosphoryl diester phosphodiesterase family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297312087|gb|EFH42511.1| glycerophosphoryl diester
           phosphodiesterase family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 754

 Score = 77.0 bits (188), Expect(2) = 2e-13
 Identities = 39/73 (53%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
 Frame = -2

Query: 213 IAFDFFSDPIIEIATYVQRLEVDGIVIEFPATATSYKRCPCTDTCSQNAPYNILLAEPQV 34
           IAFD+FSDP +E+AT++    VDG++ EFPATAT Y R PC+D  +++ PY IL AE   
Sbjct: 618 IAFDYFSDPTVELATFIAGSGVDGVITEFPATATRYLRSPCSD-LNKDQPYAILPAEAGA 676

Query: 33  LLAAA--EVEPPA 1
           LL+ A  E +PPA
Sbjct: 677 LLSVADKEAQPPA 689



 Score = 23.1 bits (48), Expect(2) = 2e-13
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = -1

Query: 253 ISVFVAVLKNEY 218
           ISV+V+VL+NEY
Sbjct: 604 ISVYVSVLRNEY 615


>ref|XP_002866246.1| glycerophosphoryl diester phosphodiesterase family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297312081|gb|EFH42505.1| glycerophosphoryl diester
           phosphodiesterase family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 754

 Score = 77.0 bits (188), Expect(2) = 2e-13
 Identities = 39/73 (53%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
 Frame = -2

Query: 213 IAFDFFSDPIIEIATYVQRLEVDGIVIEFPATATSYKRCPCTDTCSQNAPYNILLAEPQV 34
           IAFD+FSDP +E+AT++    VDG++ EFPATAT Y R PC+D  +++ PY IL AE   
Sbjct: 618 IAFDYFSDPTVELATFIAGSGVDGVITEFPATATRYLRSPCSD-LNKDQPYAILPAEAGA 676

Query: 33  LLAAA--EVEPPA 1
           LL+ A  E +PPA
Sbjct: 677 LLSVADKEAQPPA 689



 Score = 23.1 bits (48), Expect(2) = 2e-13
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = -1

Query: 253 ISVFVAVLKNEY 218
           ISV+V+VL+NEY
Sbjct: 604 ISVYVSVLRNEY 615


>ref|XP_002523503.1| glycerophosphoryl diester phosphodiesterase, putative [Ricinus
           communis] gi|223537210|gb|EEF38842.1| glycerophosphoryl
           diester phosphodiesterase, putative [Ricinus communis]
          Length = 753

 Score = 68.6 bits (166), Expect(2) = 2e-12
 Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
 Frame = -2

Query: 213 IAFDFFSDPIIEIATYVQRLEVDGIVIEFPATATSYKRCPCTDTCSQNAPYNILLAEPQV 34
           + FDFFSDP +EIATY+  LE DGI+ E+PATA+ Y R  C++  + + P+ +L  EP +
Sbjct: 616 LPFDFFSDPTVEIATYIAGLEADGIITEYPATASRYLRNVCSN-LNYDLPFTVLPIEPPL 674

Query: 33  LL--AAAEVEPPA 1
           LL    +E+ PPA
Sbjct: 675 LLQFINSEMLPPA 687



 Score = 28.1 bits (61), Expect(2) = 2e-12
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = -3

Query: 314 TDDGFVVNFTNVLHKMHSA 258
           T++G+ V  TNV+H+MH+A
Sbjct: 582 TNNGYAVTTTNVVHEMHAA 600


>ref|NP_200625.1| protein SEUSS-like 5 [Arabidopsis thaliana]
           gi|8777318|dbj|BAA96908.1| unnamed protein product
           [Arabidopsis thaliana] gi|332009624|gb|AED97007.1|
           protein SEUSS-like 5 [Arabidopsis thaliana]
          Length = 750

 Score = 73.6 bits (179), Expect(2) = 2e-12
 Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
 Frame = -2

Query: 213 IAFDFFSDPIIEIATYVQRLEVDGIVIEFPATATSYKRCPCTDTCSQNAPYNILLAEP-- 40
           +AFD+FSDP IE+AT++    VDG++ EFPATAT Y + PC+D  ++  PY IL AE   
Sbjct: 618 VAFDYFSDPTIELATFISGSGVDGVITEFPATATRYLKSPCSD-LNKEQPYAILPAEAGG 676

Query: 39  QVLLAAAEVEPPA 1
            V++A  E +PPA
Sbjct: 677 LVVVADKEAQPPA 689



 Score = 23.1 bits (48), Expect(2) = 2e-12
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = -1

Query: 253 ISVFVAVLKNEY 218
           ISV+V+VL+NEY
Sbjct: 604 ISVYVSVLRNEY 615


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