BLASTX nr result
ID: Coptis24_contig00017860
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017860 (337 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI18678.3| unnamed protein product [Vitis vinifera] 78 1e-13 ref|XP_002866252.1| glycerophosphoryl diester phosphodiesterase ... 77 2e-13 ref|XP_002866246.1| glycerophosphoryl diester phosphodiesterase ... 77 2e-13 ref|XP_002523503.1| glycerophosphoryl diester phosphodiesterase,... 69 2e-12 ref|NP_200625.1| protein SEUSS-like 5 [Arabidopsis thaliana] gi|... 74 2e-12 >emb|CBI18678.3| unnamed protein product [Vitis vinifera] Length = 756 Score = 77.8 bits (190), Expect(2) = 1e-13 Identities = 41/73 (56%), Positives = 53/73 (72%), Gaps = 2/73 (2%) Frame = -2 Query: 213 IAFDFFSDPIIEIATYVQRLEVDGIVIEFPATATSYKRCPCTDTCSQNAPYNILLAEPQV 34 IAFDFFSDP++E+ATYV RL +DG+V ++P TA +Y R PC+D ++ A Y+IL AE Sbjct: 612 IAFDFFSDPVVELATYVGRLGIDGVVTDYPKTADAYLRSPCSDLNAKVA-YSILPAEAGA 670 Query: 33 LLAAAEVE--PPA 1 LL AE E PPA Sbjct: 671 LLGLAEPEVLPPA 683 Score = 23.1 bits (48), Expect(2) = 1e-13 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = -3 Query: 314 TDDGFVVNFTNVLHKMHSA 258 T+ GF FT V+ ++H+A Sbjct: 578 TNGGFTTTFTTVVDELHAA 596 >ref|XP_002866252.1| glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis lyrata subsp. lyrata] gi|297312087|gb|EFH42511.1| glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis lyrata subsp. lyrata] Length = 754 Score = 77.0 bits (188), Expect(2) = 2e-13 Identities = 39/73 (53%), Positives = 52/73 (71%), Gaps = 2/73 (2%) Frame = -2 Query: 213 IAFDFFSDPIIEIATYVQRLEVDGIVIEFPATATSYKRCPCTDTCSQNAPYNILLAEPQV 34 IAFD+FSDP +E+AT++ VDG++ EFPATAT Y R PC+D +++ PY IL AE Sbjct: 618 IAFDYFSDPTVELATFIAGSGVDGVITEFPATATRYLRSPCSD-LNKDQPYAILPAEAGA 676 Query: 33 LLAAA--EVEPPA 1 LL+ A E +PPA Sbjct: 677 LLSVADKEAQPPA 689 Score = 23.1 bits (48), Expect(2) = 2e-13 Identities = 9/12 (75%), Positives = 12/12 (100%) Frame = -1 Query: 253 ISVFVAVLKNEY 218 ISV+V+VL+NEY Sbjct: 604 ISVYVSVLRNEY 615 >ref|XP_002866246.1| glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis lyrata subsp. lyrata] gi|297312081|gb|EFH42505.1| glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis lyrata subsp. lyrata] Length = 754 Score = 77.0 bits (188), Expect(2) = 2e-13 Identities = 39/73 (53%), Positives = 52/73 (71%), Gaps = 2/73 (2%) Frame = -2 Query: 213 IAFDFFSDPIIEIATYVQRLEVDGIVIEFPATATSYKRCPCTDTCSQNAPYNILLAEPQV 34 IAFD+FSDP +E+AT++ VDG++ EFPATAT Y R PC+D +++ PY IL AE Sbjct: 618 IAFDYFSDPTVELATFIAGSGVDGVITEFPATATRYLRSPCSD-LNKDQPYAILPAEAGA 676 Query: 33 LLAAA--EVEPPA 1 LL+ A E +PPA Sbjct: 677 LLSVADKEAQPPA 689 Score = 23.1 bits (48), Expect(2) = 2e-13 Identities = 9/12 (75%), Positives = 12/12 (100%) Frame = -1 Query: 253 ISVFVAVLKNEY 218 ISV+V+VL+NEY Sbjct: 604 ISVYVSVLRNEY 615 >ref|XP_002523503.1| glycerophosphoryl diester phosphodiesterase, putative [Ricinus communis] gi|223537210|gb|EEF38842.1| glycerophosphoryl diester phosphodiesterase, putative [Ricinus communis] Length = 753 Score = 68.6 bits (166), Expect(2) = 2e-12 Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 2/73 (2%) Frame = -2 Query: 213 IAFDFFSDPIIEIATYVQRLEVDGIVIEFPATATSYKRCPCTDTCSQNAPYNILLAEPQV 34 + FDFFSDP +EIATY+ LE DGI+ E+PATA+ Y R C++ + + P+ +L EP + Sbjct: 616 LPFDFFSDPTVEIATYIAGLEADGIITEYPATASRYLRNVCSN-LNYDLPFTVLPIEPPL 674 Query: 33 LL--AAAEVEPPA 1 LL +E+ PPA Sbjct: 675 LLQFINSEMLPPA 687 Score = 28.1 bits (61), Expect(2) = 2e-12 Identities = 10/19 (52%), Positives = 16/19 (84%) Frame = -3 Query: 314 TDDGFVVNFTNVLHKMHSA 258 T++G+ V TNV+H+MH+A Sbjct: 582 TNNGYAVTTTNVVHEMHAA 600 >ref|NP_200625.1| protein SEUSS-like 5 [Arabidopsis thaliana] gi|8777318|dbj|BAA96908.1| unnamed protein product [Arabidopsis thaliana] gi|332009624|gb|AED97007.1| protein SEUSS-like 5 [Arabidopsis thaliana] Length = 750 Score = 73.6 bits (179), Expect(2) = 2e-12 Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 2/73 (2%) Frame = -2 Query: 213 IAFDFFSDPIIEIATYVQRLEVDGIVIEFPATATSYKRCPCTDTCSQNAPYNILLAEP-- 40 +AFD+FSDP IE+AT++ VDG++ EFPATAT Y + PC+D ++ PY IL AE Sbjct: 618 VAFDYFSDPTIELATFISGSGVDGVITEFPATATRYLKSPCSD-LNKEQPYAILPAEAGG 676 Query: 39 QVLLAAAEVEPPA 1 V++A E +PPA Sbjct: 677 LVVVADKEAQPPA 689 Score = 23.1 bits (48), Expect(2) = 2e-12 Identities = 9/12 (75%), Positives = 12/12 (100%) Frame = -1 Query: 253 ISVFVAVLKNEY 218 ISV+V+VL+NEY Sbjct: 604 ISVYVSVLRNEY 615