BLASTX nr result

ID: Coptis24_contig00017847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017847
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30668.3| unnamed protein product [Vitis vinifera]              166   1e-39
ref|XP_002274664.1| PREDICTED: uncharacterized protein LOC100258...   166   1e-39
emb|CAN60202.1| hypothetical protein VITISV_036403 [Vitis vinifera]   166   1e-39
ref|NP_180647.2| trichome birefringence-like 43 protein [Arabido...   162   3e-38
gb|AAP22495.1| hypothetical protein At2g30900 [Arabidopsis thali...   162   3e-38

>emb|CBI30668.3| unnamed protein product [Vitis vinifera]
          Length = 377

 Score =  166 bits (421), Expect = 1e-39
 Identities = 73/120 (60%), Positives = 92/120 (76%), Gaps = 3/120 (2%)
 Frame = +2

Query: 110 LIIFIQQANANLMHLNKPG---RLQTSSCNVFDGSWIFDRAYPLYDSTKCPFVEREFNCQ 280
           LI+ +QQA A+    N  G   R Q SSCN+F G W+FD +YP YD++ CPF++ EF+CQ
Sbjct: 28  LILLLQQARADHQVYNVSGLRSRKQVSSCNLFQGKWVFDASYPFYDASNCPFIDPEFDCQ 87

Query: 281 KNGRPDNLYLKYKWKPNGCDLARFDGVDFLRRFKGKSIMFVGDSLSLNQWLSLICLLHNA 460
           K GRPD  YLKY WKP+ CDL RFDG+DFLRR++GK IMFVGDSLSLNQW SL+C++H +
Sbjct: 88  KYGRPDKQYLKYSWKPDSCDLPRFDGLDFLRRWRGKRIMFVGDSLSLNQWESLVCMIHQS 147


>ref|XP_002274664.1| PREDICTED: uncharacterized protein LOC100258410 [Vitis vinifera]
          Length = 409

 Score =  166 bits (421), Expect = 1e-39
 Identities = 73/120 (60%), Positives = 92/120 (76%), Gaps = 3/120 (2%)
 Frame = +2

Query: 110 LIIFIQQANANLMHLNKPG---RLQTSSCNVFDGSWIFDRAYPLYDSTKCPFVEREFNCQ 280
           LI+ +QQA A+    N  G   R Q SSCN+F G W+FD +YP YD++ CPF++ EF+CQ
Sbjct: 60  LILLLQQARADHQVYNVSGLRSRKQVSSCNLFQGKWVFDASYPFYDASNCPFIDPEFDCQ 119

Query: 281 KNGRPDNLYLKYKWKPNGCDLARFDGVDFLRRFKGKSIMFVGDSLSLNQWLSLICLLHNA 460
           K GRPD  YLKY WKP+ CDL RFDG+DFLRR++GK IMFVGDSLSLNQW SL+C++H +
Sbjct: 120 KYGRPDKQYLKYSWKPDSCDLPRFDGLDFLRRWRGKRIMFVGDSLSLNQWESLVCMIHQS 179


>emb|CAN60202.1| hypothetical protein VITISV_036403 [Vitis vinifera]
          Length = 367

 Score =  166 bits (421), Expect = 1e-39
 Identities = 73/120 (60%), Positives = 92/120 (76%), Gaps = 3/120 (2%)
 Frame = +2

Query: 110 LIIFIQQANANLMHLNKPG---RLQTSSCNVFDGSWIFDRAYPLYDSTKCPFVEREFNCQ 280
           LI+ +QQA A+    N  G   R Q SSCN+F G W+FD +YP YD++ CPF++ EF+CQ
Sbjct: 18  LILLLQQARADHQVYNVSGLRSRKQVSSCNLFQGKWVFDASYPFYDASNCPFIDPEFDCQ 77

Query: 281 KNGRPDNLYLKYKWKPNGCDLARFDGVDFLRRFKGKSIMFVGDSLSLNQWLSLICLLHNA 460
           K GRPD  YLKY WKP+ CDL RFDG+DFLRR++GK IMFVGDSLSLNQW SL+C++H +
Sbjct: 78  KYGRPDKQYLKYSWKPDSCDLPRFDGLDFLRRWRGKRIMFVGDSLSLNQWESLVCMIHQS 137


>ref|NP_180647.2| trichome birefringence-like 43 protein [Arabidopsis thaliana]
           gi|50058955|gb|AAT69222.1| hypothetical protein
           At2g30900 [Arabidopsis thaliana]
           gi|330253360|gb|AEC08454.1| trichome birefringence-like
           43 protein [Arabidopsis thaliana]
          Length = 368

 Score =  162 bits (409), Expect = 3e-38
 Identities = 74/121 (61%), Positives = 94/121 (77%), Gaps = 1/121 (0%)
 Frame = +2

Query: 101 IAVLIIFIQQANANLMHLNKPGRLQTSSCNVFDGSWIFDRAYPLYDSTKCPFVEREFNCQ 280
           I VL+  I+ A+AN   L  P R     CN++ GSW++D++YPLYDS  CPF+ER+FNC+
Sbjct: 18  ILVLLKQIESASANGSSLGLPPR---KFCNIYQGSWVYDKSYPLYDSKNCPFIERQFNCK 74

Query: 281 KNGRPDNLYLKYKWKPNGCDLARFDGVDFLRR-FKGKSIMFVGDSLSLNQWLSLICLLHN 457
            NGRPD+ YLKY+W+P+GC+L RF+G+DFL R  KGK +MFVGDSLSLNQW SL CLLHN
Sbjct: 75  SNGRPDSEYLKYRWQPSGCNLPRFNGLDFLGRIMKGKKLMFVGDSLSLNQWQSLTCLLHN 134

Query: 458 A 460
           A
Sbjct: 135 A 135


>gb|AAP22495.1| hypothetical protein At2g30900 [Arabidopsis thaliana]
          Length = 214

 Score =  162 bits (409), Expect = 3e-38
 Identities = 74/121 (61%), Positives = 94/121 (77%), Gaps = 1/121 (0%)
 Frame = +2

Query: 101 IAVLIIFIQQANANLMHLNKPGRLQTSSCNVFDGSWIFDRAYPLYDSTKCPFVEREFNCQ 280
           I VL+  I+ A+AN   L  P R     CN++ GSW++D++YPLYDS  CPF+ER+FNC+
Sbjct: 17  ILVLLKQIESASANGSSLGLPPR---KFCNIYQGSWVYDKSYPLYDSKNCPFIERQFNCK 73

Query: 281 KNGRPDNLYLKYKWKPNGCDLARFDGVDFLRR-FKGKSIMFVGDSLSLNQWLSLICLLHN 457
            NGRPD+ YLKY+W+P+GC+L RF+G+DFL R  KGK +MFVGDSLSLNQW SL CLLHN
Sbjct: 74  SNGRPDSEYLKYRWQPSGCNLPRFNGLDFLGRIMKGKKLMFVGDSLSLNQWQSLTCLLHN 133

Query: 458 A 460
           A
Sbjct: 134 A 134


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