BLASTX nr result

ID: Coptis24_contig00017841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017841
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541775.1| PREDICTED: uncharacterized protein LOC100812...    90   2e-16
ref|XP_003593345.1| Nicotiana tabacum ORF [Medicago truncatula] ...    87   1e-15
ref|XP_002268574.2| PREDICTED: uncharacterized protein LOC100260...    87   2e-15
emb|CBI25071.3| unnamed protein product [Vitis vinifera]               87   2e-15
emb|CBI25070.3| unnamed protein product [Vitis vinifera]               87   2e-15

>ref|XP_003541775.1| PREDICTED: uncharacterized protein LOC100812019 [Glycine max]
          Length = 412

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 51/94 (54%), Positives = 57/94 (60%)
 Frame = +3

Query: 3   SSNGLASGLLILAEHLRLASHTEGGPLVSLRIVGXXXXXXXXXXXXXXXNRLKLKRLAPG 182
           + NG A+GLL LAEHLR AS T+  P++SLRIVG                 LKLKRLAPG
Sbjct: 183 TENGFANGLLTLAEHLRHASRTQSSPILSLRIVGPTSLAAAPSSDTTTSTSLKLKRLAPG 242

Query: 183 LVELSSLSKSKAIEPVPAVDDEDEGVTFLAPNHF 284
           LVELSS  KSK IEP  +VD E E  T L P  F
Sbjct: 243 LVELSSPMKSKEIEPFSSVDLEGEAPTVLTPTQF 276


>ref|XP_003593345.1| Nicotiana tabacum ORF [Medicago truncatula]
           gi|355482393|gb|AES63596.1| Nicotiana tabacum ORF
           [Medicago truncatula]
          Length = 415

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 51/95 (53%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
 Frame = +3

Query: 3   SSNGLASGLLILAEHLRLASHTEGGPLVSLRIVGXXXXXXXXXXXXXXXNRLKLKRLAPG 182
           S NG A+GLL LAEHLR AS  +  PL+SLRIVG               NRLKLKRLAPG
Sbjct: 182 SQNGFAAGLLTLAEHLRHASRGQDAPLLSLRIVGPTSLEAPSSASTSSNNRLKLKRLAPG 241

Query: 183 LVELSSLSKSKAIE-PVPAVDDEDEGVTFLAPNHF 284
           LVELSS SKSK ++  +  VD ++E  T L P  F
Sbjct: 242 LVELSSQSKSKLVDTSLSTVDLQEEAPTLLTPTQF 276


>ref|XP_002268574.2| PREDICTED: uncharacterized protein LOC100260026 [Vitis vinifera]
          Length = 444

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 51/95 (53%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
 Frame = +3

Query: 3   SSNGLASGLLILAEHLRLASHTEGGPLVSLRIVGXXXXXXXXXXXXXXX-NRLKLKRLAP 179
           S+NG ASG+L LAE LR A+ T+G PL+SLRIVG                NRLKLKRLAP
Sbjct: 191 SNNGFASGILALAERLRHAARTQGEPLLSLRIVGPTSLTSPSPSASSSSSNRLKLKRLAP 250

Query: 180 GLVELSSLSKSKAIEPVPAVDDEDEGVTFLAPNHF 284
           GLVELS  SK+  IE +PAVD ++E    L P  F
Sbjct: 251 GLVELSLPSKASTIETLPAVDLQEEATALLTPVQF 285


>emb|CBI25071.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 51/95 (53%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
 Frame = +3

Query: 3   SSNGLASGLLILAEHLRLASHTEGGPLVSLRIVGXXXXXXXXXXXXXXX-NRLKLKRLAP 179
           S+NG ASG+L LAE LR A+ T+G PL+SLRIVG                NRLKLKRLAP
Sbjct: 247 SNNGFASGILALAERLRHAARTQGEPLLSLRIVGPTSLTSPSPSASSSSSNRLKLKRLAP 306

Query: 180 GLVELSSLSKSKAIEPVPAVDDEDEGVTFLAPNHF 284
           GLVELS  SK+  IE +PAVD ++E    L P  F
Sbjct: 307 GLVELSLPSKASTIETLPAVDLQEEATALLTPVQF 341


>emb|CBI25070.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 51/95 (53%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
 Frame = +3

Query: 3   SSNGLASGLLILAEHLRLASHTEGGPLVSLRIVGXXXXXXXXXXXXXXX-NRLKLKRLAP 179
           S+NG ASG+L LAE LR A+ T+G PL+SLRIVG                NRLKLKRLAP
Sbjct: 58  SNNGFASGILALAERLRHAARTQGEPLLSLRIVGPTSLTSPSPSASSSSSNRLKLKRLAP 117

Query: 180 GLVELSSLSKSKAIEPVPAVDDEDEGVTFLAPNHF 284
           GLVELS  SK+  IE +PAVD ++E    L P  F
Sbjct: 118 GLVELSLPSKASTIETLPAVDLQEEATALLTPVQF 152


Top