BLASTX nr result

ID: Coptis24_contig00017830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017830
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFO70202.1| putative ammonium transporter AMT1;3, partial [Al...    96   9e-18
gb|AFU34590.1| ammonium transporter 1;3 [Alternanthera philoxero...    96   9e-18
ref|XP_002525633.1| ammonium transporter, putative [Ricinus comm...    95   2e-17
ref|NP_001234216.1| ammonium transporter 1 member 3 [Solanum lyc...    94   4e-17
ref|NP_189072.1| putative ammonium transporter 1 member 5 [Arabi...    82   1e-13

>gb|AFO70202.1| putative ammonium transporter AMT1;3, partial [Alternanthera
           philoxeroides]
          Length = 412

 Score = 95.9 bits (237), Expect = 9e-18
 Identities = 63/131 (48%), Positives = 69/131 (52%), Gaps = 37/131 (28%)
 Frame = -1

Query: 759 RELFVTTLVGLTIDIVTL-------AIWTASNNWSLGCNGVLGGFVAITSGCLV------ 619
           R    TTL G    IVTL         W A +     CNGVLGGFVAITSGC V      
Sbjct: 206 RTAVTTTLSGSMAGIVTLFGRRLLVGHWDALDV----CNGVLGGFVAITSGCAVVEPWAA 261

Query: 618 ----------------------FVDPLEAMQLHGGCGAWGLIFTGLFAKEEFIVQTYIMM 505
                                 F DPLEA+QLHGGCGAWGLIFTGLFAKEEFI+Q Y   
Sbjct: 262 IICGFVAAWVLIGLNMVALKLHFDDPLEAVQLHGGCGAWGLIFTGLFAKEEFIIQAYDSG 321

Query: 504 QG--SRQFGVL 478
           +G  SR +G+L
Sbjct: 322 KGGISRSYGLL 332


>gb|AFU34590.1| ammonium transporter 1;3 [Alternanthera philoxeroides]
          Length = 462

 Score = 95.9 bits (237), Expect = 9e-18
 Identities = 63/131 (48%), Positives = 69/131 (52%), Gaps = 37/131 (28%)
 Frame = -1

Query: 759 RELFVTTLVGLTIDIVTL-------AIWTASNNWSLGCNGVLGGFVAITSGCLV------ 619
           R    TTL G    IVTL         W A +     CNGVLGGFVAITSGC V      
Sbjct: 256 RTAVTTTLSGSMAGIVTLFGRRLLVGHWDALDV----CNGVLGGFVAITSGCAVVEPWAA 311

Query: 618 ----------------------FVDPLEAMQLHGGCGAWGLIFTGLFAKEEFIVQTYIMM 505
                                 F DPLEA+QLHGGCGAWGLIFTGLFAKEEFI+Q Y   
Sbjct: 312 IICGFVAAWVLIGLNMVALKLHFDDPLEAVQLHGGCGAWGLIFTGLFAKEEFIIQAYDSG 371

Query: 504 QG--SRQFGVL 478
           +G  SR +G+L
Sbjct: 372 KGGISRSYGLL 382


>ref|XP_002525633.1| ammonium transporter, putative [Ricinus communis]
           gi|223535069|gb|EEF36751.1| ammonium transporter,
           putative [Ricinus communis]
          Length = 466

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 61/131 (46%), Positives = 67/131 (51%), Gaps = 37/131 (28%)
 Frame = -1

Query: 759 RELFVTTLVGLTIDIVTL-------AIWTASNNWSLGCNGVLGGFVAITSGCLV------ 619
           R    TTL G T  IVTL         W A +     CNGVLGGFVAITSGC V      
Sbjct: 256 RTAVTTTLAGSTAGIVTLFGRRLLVGHWDALDV----CNGVLGGFVAITSGCAVVEPWAA 311

Query: 618 ----------------------FVDPLEAMQLHGGCGAWGLIFTGLFAKEEFIVQTYIMM 505
                                 F DPLEA QLHGGCGAWGLIFTGLFAKEEF++Q Y   
Sbjct: 312 IVCGFCAAWILIGLNILALKLQFDDPLEATQLHGGCGAWGLIFTGLFAKEEFVIQAYESG 371

Query: 504 QGS--RQFGVL 478
           +    R +G+L
Sbjct: 372 ESGVVRPYGIL 382


>ref|NP_001234216.1| ammonium transporter 1 member 3 [Solanum lycopersicum]
           gi|22001522|sp|Q9FVN0.1|AMT13_SOLLC RecName:
           Full=Ammonium transporter 1 member 3; AltName:
           Full=LeAMT1;3 gi|9992844|gb|AAG11397.1|AF118858_1
           ammonium transporter [Solanum lycopersicum]
          Length = 460

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 60/125 (48%), Positives = 65/125 (52%), Gaps = 35/125 (28%)
 Frame = -1

Query: 783 SWSSGASIRELFVTTLVGLTIDIVTL-------AIWTASNNWSLGCNGVLGGFVAITSGC 625
           +W+S    R    TTL G T  IVTL         W A +     CNGVLGGFVAITSGC
Sbjct: 247 NWTSVG--RTAVTTTLAGSTAGIVTLFGRRLLVGHWDAMDV----CNGVLGGFVAITSGC 300

Query: 624 LV----------------------------FVDPLEAMQLHGGCGAWGLIFTGLFAKEEF 529
            V                            F DPLEA QLHGGCGAWGLIFTGLFAKEEF
Sbjct: 301 SVVEPWAAILCGFCAAWVLIGLNILALKFKFDDPLEAAQLHGGCGAWGLIFTGLFAKEEF 360

Query: 528 IVQTY 514
           ++Q Y
Sbjct: 361 VLQAY 365


>ref|NP_189072.1| putative ammonium transporter 1 member 5 [Arabidopsis thaliana]
           gi|75273698|sp|Q9LK16.1|AMT15_ARATH RecName:
           Full=Putative ammonium transporter 1 member 5;
           Short=AtAMT1;5 gi|11994690|dbj|BAB02928.1| ammonium
           transporter [Arabidopsis thaliana]
           gi|332643364|gb|AEE76885.1| putative ammonium
           transporter 1 member 5 [Arabidopsis thaliana]
          Length = 496

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 52/124 (41%), Positives = 64/124 (51%), Gaps = 31/124 (25%)
 Frame = -1

Query: 759 RELFVTTLVGLTIDIVTL-AIWTASNNWSLG--CNGVLGGFVAITSGCLV---------- 619
           R    TTL G T  + TL      S +W++   CNG+LGGF AIT+GC V          
Sbjct: 287 RTAVTTTLSGCTAALTTLFGKRLLSGHWNVTDVCNGLLGGFAAITAGCSVVDPWAAIVCG 346

Query: 618 ------------------FVDPLEAMQLHGGCGAWGLIFTGLFAKEEFIVQTYIMMQGSR 493
                             + DPLEA QLHGGCGAWGLIF GLFAKE++I + Y    G R
Sbjct: 347 FVASLVLIGCNKLAELLKYDDPLEAAQLHGGCGAWGLIFVGLFAKEKYINEVYGASPG-R 405

Query: 492 QFGV 481
            +G+
Sbjct: 406 HYGL 409


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