BLASTX nr result

ID: Coptis24_contig00017829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017829
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24391.1| unknown [Picea sitchensis]                             145   1e-32
emb|CAN61083.1| hypothetical protein VITISV_041916 [Vitis vinifera]   135   1e-29
ref|XP_002961501.1| hypothetical protein SELMODRAFT_77573 [Selag...   135   2e-29
ref|XP_002971305.1| hypothetical protein SELMODRAFT_95072 [Selag...   135   2e-29
ref|NP_190428.1| nuclear transcription factor Y subunit C-1 [Ara...   134   3e-29

>gb|ABK24391.1| unknown [Picea sitchensis]
          Length = 236

 Score =  145 bits (366), Expect = 1e-32
 Identities = 79/124 (63%), Positives = 90/124 (72%), Gaps = 4/124 (3%)
 Frame = -3

Query: 977 DHKAHNLPLARIKKIMKSDEDVKMISADAPILFSKECELFILELTLRSWMHTEDGNRRTL 798
           + K H LPLARIKKIMKSDEDVKMISA+AP+LFSK CELFILELTLRSW+HTE+  RRTL
Sbjct: 79  EFKQHQLPLARIKKIMKSDEDVKMISAEAPVLFSKACELFILELTLRSWLHTEENKRRTL 138

Query: 797 QRADIANAISDAQVLDFLLDIVPKEEGDEDVTCRNGRRTMPRLAT----GIHFPVMGANQ 630
           QR DIA AIS   VLDFLLDIVP++E  +D         +P   +    GIHFP+M A  
Sbjct: 139 QRNDIAGAISRGDVLDFLLDIVPRDE-VKDEEYGGHWPGIPHAESMSYGGIHFPLMHAQP 197

Query: 629 VHQN 618
            H N
Sbjct: 198 YHHN 201


>emb|CAN61083.1| hypothetical protein VITISV_041916 [Vitis vinifera]
          Length = 264

 Score =  135 bits (341), Expect = 1e-29
 Identities = 65/112 (58%), Positives = 86/112 (76%)
 Frame = -3

Query: 977 DHKAHNLPLARIKKIMKSDEDVKMISADAPILFSKECELFILELTLRSWMHTEDGNRRTL 798
           D K H+LPLARIKKIMK+DEDV+MISA+AP++F++ CE+FILELTLRSW HTE+  RRTL
Sbjct: 98  DFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTL 157

Query: 797 QRADIANAISDAQVLDFLLDIVPKEEGDEDVTCRNGRRTMPRLATGIHFPVM 642
           Q+ DIA AI+   + DFL+DIVP+E+  ++V     R TMP     +H P++
Sbjct: 158 QKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGTMPVGGASVHSPLL 209


>ref|XP_002961501.1| hypothetical protein SELMODRAFT_77573 [Selaginella moellendorffii]
           gi|300170160|gb|EFJ36761.1| hypothetical protein
           SELMODRAFT_77573 [Selaginella moellendorffii]
          Length = 94

 Score =  135 bits (340), Expect = 2e-29
 Identities = 64/86 (74%), Positives = 74/86 (86%)
 Frame = -3

Query: 977 DHKAHNLPLARIKKIMKSDEDVKMISADAPILFSKECELFILELTLRSWMHTEDGNRRTL 798
           D K H LPLARIKKIMK+DEDVKMISA+AP+LF+K CELFILELT R+WMHTE+  RRTL
Sbjct: 1   DFKTHQLPLARIKKIMKADEDVKMISAEAPVLFAKACELFILELTFRAWMHTEENKRRTL 60

Query: 797 QRADIANAISDAQVLDFLLDIVPKEE 720
           QR D+A AIS A + DFL+DIVP+EE
Sbjct: 61  QRNDVAGAISRADIFDFLVDIVPREE 86


>ref|XP_002971305.1| hypothetical protein SELMODRAFT_95072 [Selaginella moellendorffii]
           gi|300161287|gb|EFJ27903.1| hypothetical protein
           SELMODRAFT_95072 [Selaginella moellendorffii]
          Length = 94

 Score =  135 bits (340), Expect = 2e-29
 Identities = 64/86 (74%), Positives = 74/86 (86%)
 Frame = -3

Query: 977 DHKAHNLPLARIKKIMKSDEDVKMISADAPILFSKECELFILELTLRSWMHTEDGNRRTL 798
           D K H LPLARIKKIMK+DEDVKMISA+AP+LF+K CELFILELT R+WMHTE+  RRTL
Sbjct: 1   DFKTHQLPLARIKKIMKADEDVKMISAEAPVLFAKACELFILELTFRAWMHTEENKRRTL 60

Query: 797 QRADIANAISDAQVLDFLLDIVPKEE 720
           QR D+A AIS A + DFL+DIVP+EE
Sbjct: 61  QRNDVAGAISRADIFDFLVDIVPREE 86


>ref|NP_190428.1| nuclear transcription factor Y subunit C-1 [Arabidopsis thaliana]
           gi|75266105|sp|Q9SMP0.1|NFYC1_ARATH RecName:
           Full=Nuclear transcription factor Y subunit C-1;
           Short=AtNF-YC-1; AltName: Full=Transcriptional activator
           HAP5A gi|6523090|emb|CAB62348.1| transcription factor
           Hap5a [Arabidopsis thaliana] gi|20260196|gb|AAM12996.1|
           transcription factor Hap5a [Arabidopsis thaliana]
           gi|21554251|gb|AAM63326.1| transcription factor Hap5a
           [Arabidopsis thaliana] gi|24899757|gb|AAN65093.1|
           transcription factor Hap5a [Arabidopsis thaliana]
           gi|332644913|gb|AEE78434.1| nuclear transcription factor
           Y subunit C-1 [Arabidopsis thaliana]
          Length = 234

 Score =  134 bits (337), Expect = 3e-29
 Identities = 66/115 (57%), Positives = 86/115 (74%), Gaps = 2/115 (1%)
 Frame = -3

Query: 977 DHKAHNLPLARIKKIMKSDEDVKMISADAPILFSKECELFILELTLRSWMHTEDGNRRTL 798
           D K H LPLARIKKIMK+DEDV+MISA+APILF+K CELFILELT+RSW+H E+  RRTL
Sbjct: 60  DFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTL 119

Query: 797 QRADIANAISDAQVLDFLLDIVPKEEGDEDVTCRNGRRTMPRLATGI--HFPVMG 639
           Q+ DIA AI+   + DFL+DIVP++E  ++     G   +   A+G+  ++P MG
Sbjct: 120 QKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAVLGGGMVVAPTASGVPYYYPPMG 174


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