BLASTX nr result
ID: Coptis24_contig00017824
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017824 (638 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleop... 233 2e-59 ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleop... 229 2e-58 gb|ADN34128.1| hypothetical protein [Cucumis melo subsp. melo] 229 4e-58 ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|2... 224 1e-56 ref|XP_004166896.1| PREDICTED: U11/U12 small nuclear ribonucleop... 210 2e-52 >ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Vitis vinifera] gi|302141700|emb|CBI18903.3| unnamed protein product [Vitis vinifera] Length = 176 Score = 233 bits (595), Expect = 2e-59 Identities = 115/167 (68%), Positives = 135/167 (80%) Frame = +2 Query: 11 KSDEDVVGYNSNTVKKARLQSTLSALLEDPILADVPKKPTLTEVDTLISLELGSAMRISI 190 + +EDV YNSN VKKARL STL+ALL+DPILADVPK+PTL++VDTLI+LELGSAMRIS+ Sbjct: 9 REEEDVGSYNSNNVKKARLHSTLTALLDDPILADVPKEPTLSDVDTLINLELGSAMRISV 68 Query: 191 NKMDGTSFEVAVLNSATVKDLKSAVKKKTNEMEQSKMGHRHISWKHVWANFCLSHHNDKL 370 K+D TSF+VAVLNSATVKDLK A+KKK N+MEQSKMGHRHISWKHVWANFCLS++NDKL Sbjct: 69 IKLDSTSFDVAVLNSATVKDLKLAIKKKINDMEQSKMGHRHISWKHVWANFCLSYYNDKL 128 Query: 371 IDDNTVLQEFGLRNNSQVHFVPXXXXXXXXXXXXXXXXXXXXGLSKR 511 I+D + LQ+FG+ NNSQVHFVP GL+KR Sbjct: 129 INDGSALQDFGIHNNSQVHFVPFIMSKGSQRHSRRRKHRFFHGLNKR 175 >ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis sativus] Length = 181 Score = 229 bits (585), Expect = 2e-58 Identities = 107/145 (73%), Positives = 130/145 (89%) Frame = +2 Query: 2 SNVKSDEDVVGYNSNTVKKARLQSTLSALLEDPILADVPKKPTLTEVDTLISLELGSAMR 181 S +K +E+ VGY+SN VKK RL STL+ALL+DPILADVPK PTL+ VDTLISLELGSAMR Sbjct: 11 SIIKDEENAVGYHSNNVKKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMR 70 Query: 182 ISINKMDGTSFEVAVLNSATVKDLKSAVKKKTNEMEQSKMGHRHISWKHVWANFCLSHHN 361 IS+ K+DGT+ +V ++NSAT+KDLK A+KKK NEMEQSKMGHRHISWKHVWANFCL+H N Sbjct: 71 ISVLKLDGTAIDVVIMNSATLKDLKLAIKKKVNEMEQSKMGHRHISWKHVWANFCLAHLN 130 Query: 362 DKLIDDNTVLQEFGLRNNSQVHFVP 436 +KL+DD++VLQ+FG+RNNSQV F+P Sbjct: 131 EKLLDDSSVLQDFGIRNNSQVRFIP 155 >gb|ADN34128.1| hypothetical protein [Cucumis melo subsp. melo] Length = 181 Score = 229 bits (583), Expect = 4e-58 Identities = 105/142 (73%), Positives = 129/142 (90%) Frame = +2 Query: 11 KSDEDVVGYNSNTVKKARLQSTLSALLEDPILADVPKKPTLTEVDTLISLELGSAMRISI 190 K +E+VVGY+SN VKK RL STL+ALL+DPILADVPK PTL+ VDTLISLELGSAMRIS+ Sbjct: 14 KDEENVVGYHSNNVKKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMRISV 73 Query: 191 NKMDGTSFEVAVLNSATVKDLKSAVKKKTNEMEQSKMGHRHISWKHVWANFCLSHHNDKL 370 K+DGT+ +V ++NSAT+KDLK A+K+K NE EQSKMGHRHISWKHVWANFCL+HHN+K+ Sbjct: 74 LKLDGTAIDVLIMNSATLKDLKLAIKQKVNETEQSKMGHRHISWKHVWANFCLAHHNEKI 133 Query: 371 IDDNTVLQEFGLRNNSQVHFVP 436 +DD++VLQ+FG+RNNSQV F+P Sbjct: 134 LDDSSVLQDFGIRNNSQVRFIP 155 >ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|222843666|gb|EEE81213.1| predicted protein [Populus trichocarpa] Length = 173 Score = 224 bits (571), Expect = 1e-56 Identities = 110/171 (64%), Positives = 136/171 (79%) Frame = +2 Query: 2 SNVKSDEDVVGYNSNTVKKARLQSTLSALLEDPILADVPKKPTLTEVDTLISLELGSAMR 181 S+ K +++V GYNS+ VKKA+LQSTL+ALL+DPIL+DVPKKPTL++VDTLISLE+GSAMR Sbjct: 3 SSSKGEDEVGGYNSSNVKKAKLQSTLAALLDDPILSDVPKKPTLSDVDTLISLEMGSAMR 62 Query: 182 ISINKMDGTSFEVAVLNSATVKDLKSAVKKKTNEMEQSKMGHRHISWKHVWANFCLSHHN 361 IS+ K+DGTSF+VA++NSATVKDLK A+K+K EMEQSKMGHRHISWK VWANF LS+HN Sbjct: 63 ISVQKLDGTSFDVALMNSATVKDLKLAIKRKLIEMEQSKMGHRHISWKKVWANFALSYHN 122 Query: 362 DKLIDDNTVLQEFGLRNNSQVHFVPXXXXXXXXXXXXXXXXXXXXGLSKRS 514 KL+DDN+ LQ+ G+RNNSQVHF GL+KR+ Sbjct: 123 QKLLDDNSALQDSGIRNNSQVHFASYVMSKDSQRHSKRRKHRFFHGLNKRA 173 >ref|XP_004166896.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis sativus] Length = 209 Score = 210 bits (535), Expect = 2e-52 Identities = 97/128 (75%), Positives = 117/128 (91%) Frame = +2 Query: 53 KKARLQSTLSALLEDPILADVPKKPTLTEVDTLISLELGSAMRISINKMDGTSFEVAVLN 232 KK RL STL+ALL+DPILADVPK PTL+ VDTLISLELGSAMRIS+ K+DGT+ +V ++N Sbjct: 56 KKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMRISVLKLDGTAIDVVIMN 115 Query: 233 SATVKDLKSAVKKKTNEMEQSKMGHRHISWKHVWANFCLSHHNDKLIDDNTVLQEFGLRN 412 SAT+KDLK A+KKK NEMEQSKMGHRHISWKHVWANFCL+H N+KL+DD++VLQ+FG+RN Sbjct: 116 SATLKDLKLAIKKKVNEMEQSKMGHRHISWKHVWANFCLAHLNEKLLDDSSVLQDFGIRN 175 Query: 413 NSQVHFVP 436 NSQ+ F+P Sbjct: 176 NSQIRFIP 183