BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017824
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleop...   233   2e-59
ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleop...   229   2e-58
gb|ADN34128.1| hypothetical protein [Cucumis melo subsp. melo]        229   4e-58
ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|2...   224   1e-56
ref|XP_004166896.1| PREDICTED: U11/U12 small nuclear ribonucleop...   210   2e-52

>ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
           [Vitis vinifera] gi|302141700|emb|CBI18903.3| unnamed
           protein product [Vitis vinifera]
          Length = 176

 Score =  233 bits (595), Expect = 2e-59
 Identities = 115/167 (68%), Positives = 135/167 (80%)
 Frame = +2

Query: 11  KSDEDVVGYNSNTVKKARLQSTLSALLEDPILADVPKKPTLTEVDTLISLELGSAMRISI 190
           + +EDV  YNSN VKKARL STL+ALL+DPILADVPK+PTL++VDTLI+LELGSAMRIS+
Sbjct: 9   REEEDVGSYNSNNVKKARLHSTLTALLDDPILADVPKEPTLSDVDTLINLELGSAMRISV 68

Query: 191 NKMDGTSFEVAVLNSATVKDLKSAVKKKTNEMEQSKMGHRHISWKHVWANFCLSHHNDKL 370
            K+D TSF+VAVLNSATVKDLK A+KKK N+MEQSKMGHRHISWKHVWANFCLS++NDKL
Sbjct: 69  IKLDSTSFDVAVLNSATVKDLKLAIKKKINDMEQSKMGHRHISWKHVWANFCLSYYNDKL 128

Query: 371 IDDNTVLQEFGLRNNSQVHFVPXXXXXXXXXXXXXXXXXXXXGLSKR 511
           I+D + LQ+FG+ NNSQVHFVP                    GL+KR
Sbjct: 129 INDGSALQDFGIHNNSQVHFVPFIMSKGSQRHSRRRKHRFFHGLNKR 175


>ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
           protein-like [Cucumis sativus]
          Length = 181

 Score =  229 bits (585), Expect = 2e-58
 Identities = 107/145 (73%), Positives = 130/145 (89%)
 Frame = +2

Query: 2   SNVKSDEDVVGYNSNTVKKARLQSTLSALLEDPILADVPKKPTLTEVDTLISLELGSAMR 181
           S +K +E+ VGY+SN VKK RL STL+ALL+DPILADVPK PTL+ VDTLISLELGSAMR
Sbjct: 11  SIIKDEENAVGYHSNNVKKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMR 70

Query: 182 ISINKMDGTSFEVAVLNSATVKDLKSAVKKKTNEMEQSKMGHRHISWKHVWANFCLSHHN 361
           IS+ K+DGT+ +V ++NSAT+KDLK A+KKK NEMEQSKMGHRHISWKHVWANFCL+H N
Sbjct: 71  ISVLKLDGTAIDVVIMNSATLKDLKLAIKKKVNEMEQSKMGHRHISWKHVWANFCLAHLN 130

Query: 362 DKLIDDNTVLQEFGLRNNSQVHFVP 436
           +KL+DD++VLQ+FG+RNNSQV F+P
Sbjct: 131 EKLLDDSSVLQDFGIRNNSQVRFIP 155


>gb|ADN34128.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 181

 Score =  229 bits (583), Expect = 4e-58
 Identities = 105/142 (73%), Positives = 129/142 (90%)
 Frame = +2

Query: 11  KSDEDVVGYNSNTVKKARLQSTLSALLEDPILADVPKKPTLTEVDTLISLELGSAMRISI 190
           K +E+VVGY+SN VKK RL STL+ALL+DPILADVPK PTL+ VDTLISLELGSAMRIS+
Sbjct: 14  KDEENVVGYHSNNVKKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMRISV 73

Query: 191 NKMDGTSFEVAVLNSATVKDLKSAVKKKTNEMEQSKMGHRHISWKHVWANFCLSHHNDKL 370
            K+DGT+ +V ++NSAT+KDLK A+K+K NE EQSKMGHRHISWKHVWANFCL+HHN+K+
Sbjct: 74  LKLDGTAIDVLIMNSATLKDLKLAIKQKVNETEQSKMGHRHISWKHVWANFCLAHHNEKI 133

Query: 371 IDDNTVLQEFGLRNNSQVHFVP 436
           +DD++VLQ+FG+RNNSQV F+P
Sbjct: 134 LDDSSVLQDFGIRNNSQVRFIP 155


>ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|222843666|gb|EEE81213.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  224 bits (571), Expect = 1e-56
 Identities = 110/171 (64%), Positives = 136/171 (79%)
 Frame = +2

Query: 2   SNVKSDEDVVGYNSNTVKKARLQSTLSALLEDPILADVPKKPTLTEVDTLISLELGSAMR 181
           S+ K +++V GYNS+ VKKA+LQSTL+ALL+DPIL+DVPKKPTL++VDTLISLE+GSAMR
Sbjct: 3   SSSKGEDEVGGYNSSNVKKAKLQSTLAALLDDPILSDVPKKPTLSDVDTLISLEMGSAMR 62

Query: 182 ISINKMDGTSFEVAVLNSATVKDLKSAVKKKTNEMEQSKMGHRHISWKHVWANFCLSHHN 361
           IS+ K+DGTSF+VA++NSATVKDLK A+K+K  EMEQSKMGHRHISWK VWANF LS+HN
Sbjct: 63  ISVQKLDGTSFDVALMNSATVKDLKLAIKRKLIEMEQSKMGHRHISWKKVWANFALSYHN 122

Query: 362 DKLIDDNTVLQEFGLRNNSQVHFVPXXXXXXXXXXXXXXXXXXXXGLSKRS 514
            KL+DDN+ LQ+ G+RNNSQVHF                      GL+KR+
Sbjct: 123 QKLLDDNSALQDSGIRNNSQVHFASYVMSKDSQRHSKRRKHRFFHGLNKRA 173


>ref|XP_004166896.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
           protein-like [Cucumis sativus]
          Length = 209

 Score =  210 bits (535), Expect = 2e-52
 Identities = 97/128 (75%), Positives = 117/128 (91%)
 Frame = +2

Query: 53  KKARLQSTLSALLEDPILADVPKKPTLTEVDTLISLELGSAMRISINKMDGTSFEVAVLN 232
           KK RL STL+ALL+DPILADVPK PTL+ VDTLISLELGSAMRIS+ K+DGT+ +V ++N
Sbjct: 56  KKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMRISVLKLDGTAIDVVIMN 115

Query: 233 SATVKDLKSAVKKKTNEMEQSKMGHRHISWKHVWANFCLSHHNDKLIDDNTVLQEFGLRN 412
           SAT+KDLK A+KKK NEMEQSKMGHRHISWKHVWANFCL+H N+KL+DD++VLQ+FG+RN
Sbjct: 116 SATLKDLKLAIKKKVNEMEQSKMGHRHISWKHVWANFCLAHLNEKLLDDSSVLQDFGIRN 175

Query: 413 NSQVHFVP 436
           NSQ+ F+P
Sbjct: 176 NSQIRFIP 183