BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017801
         (1556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|2...   510   e-142
ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1...   484   e-134
ref|XP_004146915.1| PREDICTED: protein RFT1 homolog [Cucumis sat...   483   e-134
ref|XP_003534407.1| PREDICTED: protein RFT1 homolog [Glycine max]     479   e-132
gb|AAR15504.1| nuclear division RFT1-like protein [Arabidopsis a...   471   e-130

>ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|222833933|gb|EEE72410.1|
            predicted protein [Populus trichocarpa]
          Length = 476

 Score =  510 bits (1313), Expect = e-142
 Identities = 272/447 (60%), Positives = 316/447 (70%)
 Frame = +2

Query: 2    GLRLSDLHAQAILIHGFACILELLAEXXXXXXXXXXXXXXXXXXXXAATLLRCMTTYILI 181
            GL  SD +AQAILI+G ACILELLAE                    AATLLRC+T YILI
Sbjct: 73   GLTYSDPYAQAILINGCACILELLAEPLYIVSQNLLLLKLRLIVETAATLLRCLTMYILI 132

Query: 182  VRQMNMEREIVFALSQIAYGACXXXXXXXXXXXXRIVRSSNLIPFRMGNMLDLDGKLLHM 361
            V+Q +M++ IVFALSQ AYGAC            R  RSS L PFR+G ++D D +L  M
Sbjct: 133  VKQTSMDKGIVFALSQTAYGACLFLGYWSYFVLFRAFRSSVLFPFRLGTIMDYDKQLSSM 192

Query: 362  CKLFTGQSFRKLVLQEGEKMILVWFDTPFNQAVYGLVDK*GSLVVRLVFLPFEESSYATF 541
            C LFT QSF+KL+LQEGEK +LVW DTP+NQAVYGLVDK G LVVRLVFLPFEESSYATF
Sbjct: 193  CVLFTLQSFQKLILQEGEKFVLVWLDTPYNQAVYGLVDKLGILVVRLVFLPFEESSYATF 252

Query: 542  ARFASGQNPQGNRKLAGALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASA 721
            AR ASG++P  +RKL   L+EALKLVLLIG+V M FGPSYSY+LIR+LYG KWSDGEAS 
Sbjct: 253  ARSASGKDPNKSRKLGSCLSEALKLVLLIGVVFMTFGPSYSYSLIRMLYGRKWSDGEAST 312

Query: 722  ALRYYCFYVIVLAMNGTSEAFLHAVATENQLKQSNDSLLIFSGIYILLNILLIRSAGAVG 901
            AL+YYCFYVIVLAMNGTSEAFLHAVATE+QLK+SNDSLL+FS IY+++N+LLI+SAGAVG
Sbjct: 313  ALQYYCFYVIVLAMNGTSEAFLHAVATESQLKRSNDSLLVFSLIYVVMNVLLIKSAGAVG 372

Query: 902  LIVANXXXXXXXXXFIQFKLLLRKYGRALD*KELFFLKACLPFMFLTAAKDMLLRIIYSA 1081
            LI+AN                                           + +M+LRIIYSA
Sbjct: 373  LILAN-------------------------------------------SLNMILRIIYSA 389

Query: 1082 VFIKSYFQDAQSFSFRQCLPSGWVVLLVSGVATFFSERIFLDRMNFWPTMFIHFSVGLVF 1261
            VFIK YFQD+ +FSF  CLPSGW VLL SGV T  SE++FLD  NFWPT  IHFS+GL  
Sbjct: 390  VFIKYYFQDSSAFSFTSCLPSGWTVLLFSGVITLISEKLFLDHENFWPTFLIHFSIGLTC 449

Query: 1262 FSISTVVIYNQEGPFIKKIIRFRDHGD 1342
            F IS+ +IY +E PFI +IIRFRDH D
Sbjct: 450  FCISSFIIYRRERPFINRIIRFRDHMD 476


>ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1 homolog [Glycine max]
          Length = 518

 Score =  484 bits (1245), Expect = e-134
 Identities = 261/443 (58%), Positives = 304/443 (68%)
 Frame = +2

Query: 14   SDLHAQAILIHGFACILELLAEXXXXXXXXXXXXXXXXXXXXAATLLRCMTTYILIVRQM 193
            S  H QAILI+GFACILELLAE                     ATL  C+T Y LIV+Q 
Sbjct: 119  SSPHGQAILINGFACILELLAEPVYILSQNLVLLELRLMVETVATLSWCLTMYFLIVKQT 178

Query: 194  NMEREIVFALSQIAYGACXXXXXXXXXXXXRIVRSSNLIPFRMGNMLDLDGKLLHMCKLF 373
             +E+ I+FALSQ AYGAC            +  R S L PFR G ++D D +L  MC LF
Sbjct: 179  GIEKSIIFALSQSAYGACLFLGYWGYLLLSQKFRVSYLFPFREGKVIDFDRQLSKMCMLF 238

Query: 374  TGQSFRKLVLQEGEKMILVWFDTPFNQAVYGLVDK*GSLVVRLVFLPFEESSYATFARFA 553
            T QSFRKL+LQEGEK++LVW DTP+NQAVYGLVDK GSLVVRLVFLPFEESSYATFAR  
Sbjct: 239  TFQSFRKLILQEGEKIVLVWLDTPYNQAVYGLVDKFGSLVVRLVFLPFEESSYATFARST 298

Query: 554  SGQNPQGNRKLAGALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASAALRY 733
            SGQ P  ++KL   +TE+LKLVLLIGLV MAFGPSYSY+LIR+LYG KWSDGEAS ALR 
Sbjct: 299  SGQYPGKSKKLGNGVTESLKLVLLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRC 358

Query: 734  YCFYVIVLAMNGTSEAFLHAVATENQLKQSNDSLLIFSGIYILLNILLIRSAGAVGLIVA 913
            YCFYVIVLAMNGTSEAF+HAVATE+QLK+SNDSLL+FS IYI+LN+LLIRSAGAVGLI+A
Sbjct: 359  YCFYVIVLAMNGTSEAFMHAVATESQLKRSNDSLLVFSLIYIVLNVLLIRSAGAVGLIMA 418

Query: 914  NXXXXXXXXXFIQFKLLLRKYGRALD*KELFFLKACLPFMFLTAAKDMLLRIIYSAVFIK 1093
            N                                           + +M LRI+YSA+FIK
Sbjct: 419  N-------------------------------------------SLNMTLRILYSAIFIK 435

Query: 1094 SYFQDAQSFSFRQCLPSGWVVLLVSGVATFFSERIFLDRMNFWPTMFIHFSVGLVFFSIS 1273
            +YFQ + SFSF  CLPSGW+ LL+SGV T  SE + LDR NF P+  +H SVGLV F +S
Sbjct: 436  NYFQGSSSFSFYGCLPSGWIALLLSGVITLISENVLLDRDNFXPSFILHLSVGLVCFCVS 495

Query: 1274 TVVIYNQEGPFIKKIIRFRDHGD 1342
            + VIY +E PFI++IIRF DH D
Sbjct: 496  SYVIYCREKPFIRRIIRFNDHVD 518


>ref|XP_004146915.1| PREDICTED: protein RFT1 homolog [Cucumis sativus]
            gi|449520289|ref|XP_004167166.1| PREDICTED: protein RFT1
            homolog [Cucumis sativus]
          Length = 528

 Score =  483 bits (1242), Expect = e-134
 Identities = 261/444 (58%), Positives = 301/444 (67%)
 Frame = +2

Query: 11   LSDLHAQAILIHGFACILELLAEXXXXXXXXXXXXXXXXXXXXAATLLRCMTTYILIVRQ 190
            LS+ +AQAILI+G ACILELLAE                     AT  RCMT YIL+VR 
Sbjct: 129  LSNPYAQAILINGCACILELLAEPLYILSQTLLLLKLRLLVETMATFSRCMTMYILLVRG 188

Query: 191  MNMEREIVFALSQIAYGACXXXXXXXXXXXXRIVRSSNLIPFRMGNMLDLDGKLLHMCKL 370
             NME+ I+FALSQ AYGAC            R  + S+L PFR+GNM D D KL +MC L
Sbjct: 189  SNMEKGIIFALSQSAYGACLFLGYWVYFLNFRAFKWSDLFPFRVGNMKDFDKKLSNMCIL 248

Query: 371  FTGQSFRKLVLQEGEKMILVWFDTPFNQAVYGLVDK*GSLVVRLVFLPFEESSYATFARF 550
            FT QSFRKLVLQEGEKM+LVW DTP+NQAVYGLVDK GSLVVRLVFLPFEESSY TFAR 
Sbjct: 249  FTLQSFRKLVLQEGEKMVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYTTFARS 308

Query: 551  ASGQNPQGNRKLAGALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASAALR 730
            ASG+ P   RKLA  L+EALKLV+LIGL+ MAFGPSYSYALIR+LYG KWSDGEA  ALR
Sbjct: 309  ASGEYPDKTRKLAICLSEALKLVVLIGLIFMAFGPSYSYALIRLLYGQKWSDGEAPTALR 368

Query: 731  YYCFYVIVLAMNGTSEAFLHAVATENQLKQSNDSLLIFSGIYILLNILLIRSAGAVGLIV 910
            YYC Y+IVLAMNGTSEAFLHAVA E+QLK+SNDSLL+FS IY++LN LLIRS+G VGLI 
Sbjct: 369  YYCLYIIVLAMNGTSEAFLHAVANESQLKKSNDSLLLFSFIYVMLNFLLIRSSGVVGLIF 428

Query: 911  ANXXXXXXXXXFIQFKLLLRKYGRALD*KELFFLKACLPFMFLTAAKDMLLRIIYSAVFI 1090
            AN                                           + +M+LRI YSA+FI
Sbjct: 429  AN-------------------------------------------SINMILRITYSAIFI 445

Query: 1091 KSYFQDAQSFSFRQCLPSGWVVLLVSGVATFFSERIFLDRMNFWPTMFIHFSVGLVFFSI 1270
            K YF++  SFSF  CLPSGW+ LL+SGV T  SER+FLD+  FW T  +HFS+GL  F +
Sbjct: 446  KGYFKN-PSFSFNSCLPSGWIFLLLSGVLTLISERLFLDQQKFWSTFSLHFSIGLACFLV 504

Query: 1271 STVVIYNQEGPFIKKIIRFRDHGD 1342
            S  +IY +E  F  KI+RFR H D
Sbjct: 505  SLCIIYRRERSFFNKIVRFRQHSD 528


>ref|XP_003534407.1| PREDICTED: protein RFT1 homolog [Glycine max]
          Length = 518

 Score =  479 bits (1232), Expect = e-132
 Identities = 262/443 (59%), Positives = 300/443 (67%)
 Frame = +2

Query: 14   SDLHAQAILIHGFACILELLAEXXXXXXXXXXXXXXXXXXXXAATLLRCMTTYILIVRQM 193
            S  H QAILI+GFACILELLAE                     ATL RC+T Y LIV+Q 
Sbjct: 119  SSPHGQAILINGFACILELLAEPVYILSQNLVLLELRLMVETVATLSRCLTMYFLIVKQT 178

Query: 194  NMEREIVFALSQIAYGACXXXXXXXXXXXXRIVRSSNLIPFRMGNMLDLDGKLLHMCKLF 373
             ME+ I+FALSQ AYGAC            +  R S L PFR G M+D D +L  MC LF
Sbjct: 179  GMEKSIIFALSQSAYGACLFLGYWGYLLLSQKFRVSYLFPFREGKMIDFDQQLSKMCILF 238

Query: 374  TGQSFRKLVLQEGEKMILVWFDTPFNQAVYGLVDK*GSLVVRLVFLPFEESSYATFARFA 553
            T QSFRKL+LQEGEK++LVW DTP+NQAVYGLVDK GSLVVRLVFLPFEESSY TFAR A
Sbjct: 239  TFQSFRKLILQEGEKIVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYVTFARSA 298

Query: 554  SGQNPQGNRKLAGALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASAALRY 733
            SGQ P  ++KL  +LTE+LKLVLLIGLV MAFGPSYSY+LIR+LYG KWSDGEAS ALR 
Sbjct: 299  SGQYPGKSKKLGNSLTESLKLVLLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRC 358

Query: 734  YCFYVIVLAMNGTSEAFLHAVATENQLKQSNDSLLIFSGIYILLNILLIRSAGAVGLIVA 913
            YCFYVIVLAMNGTSEAF+HAVATE QLK+SNDSLLIFS IYI+LN++LIR AGAVGLI+A
Sbjct: 359  YCFYVIVLAMNGTSEAFMHAVATERQLKRSNDSLLIFSLIYIVLNVMLIRLAGAVGLILA 418

Query: 914  NXXXXXXXXXFIQFKLLLRKYGRALD*KELFFLKACLPFMFLTAAKDMLLRIIYSAVFIK 1093
            N                                           + +M LRI+YSA FIK
Sbjct: 419  N-------------------------------------------SLNMTLRILYSATFIK 435

Query: 1094 SYFQDAQSFSFRQCLPSGWVVLLVSGVATFFSERIFLDRMNFWPTMFIHFSVGLVFFSIS 1273
            +YFQ + SFSF  CLPSGW+ LL+SGV T  SE + LDR NF  +   H SVGL  F +S
Sbjct: 436  NYFQGSSSFSFCGCLPSGWITLLLSGVITLVSENVLLDRDNFSLSFMFHLSVGLACFCVS 495

Query: 1274 TVVIYNQEGPFIKKIIRFRDHGD 1342
            + VIY +E PFI++IIRF DH D
Sbjct: 496  SYVIYCREKPFIRRIIRFNDHVD 518


>gb|AAR15504.1| nuclear division RFT1-like protein [Arabidopsis arenosa]
          Length = 478

 Score =  471 bits (1212), Expect = e-130
 Identities = 245/444 (55%), Positives = 298/444 (67%)
 Frame = +2

Query: 5    LRLSDLHAQAILIHGFACILELLAEXXXXXXXXXXXXXXXXXXXXAATLLRCMTTYILIV 184
            L  SD +AQAILIHGFAC+LEL+AE                    AAT  RC+T + LIV
Sbjct: 74   LSYSDTYAQAILIHGFACLLELMAEPLYILSQTLVKLELRLFVEIAATFARCLTLWSLIV 133

Query: 185  RQMNMEREIVFALSQIAYGACXXXXXXXXXXXXRIVRSSNLIPFRMGNMLDLDGKLLHMC 364
             Q NME+ IVFALSQ+AYG                +RSS+L PFR GN +D D KL +MC
Sbjct: 134  NQTNMEKGIVFALSQVAYGGSLFLGYWAYFLISGALRSSDLFPFRPGNFMDFDNKLSNMC 193

Query: 365  KLFTGQSFRKLVLQEGEKMILVWFDTPFNQAVYGLVDK*GSLVVRLVFLPFEESSYATFA 544
             LFT QSFRKL+LQEGEK++LVW DTP+NQAVYG+VDK G+LVVR+VF PFEE+SY  FA
Sbjct: 194  MLFTFQSFRKLILQEGEKLVLVWLDTPYNQAVYGIVDKLGNLVVRMVFFPFEETSYTIFA 253

Query: 545  RFASGQNPQGNRKLAGALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASAA 724
            RFASG   +  +KL   LTEALKLV+LIGL+ MAFGPSYSY+LIR+LYG KWSDGEAS A
Sbjct: 254  RFASGDYQERKKKLGIGLTEALKLVILIGLIFMAFGPSYSYSLIRLLYGEKWSDGEASLA 313

Query: 725  LRYYCFYVIVLAMNGTSEAFLHAVATENQLKQSNDSLLIFSGIYILLNILLIRSAGAVGL 904
            L++YC Y+IVLAMNGTSEAFLHAV TEN+LK+SND LL+FS IY+ LNILLIRSAGA+GL
Sbjct: 314  LQFYCLYIIVLAMNGTSEAFLHAVGTENELKRSNDMLLVFSLIYVTLNILLIRSAGAIGL 373

Query: 905  IVANXXXXXXXXXFIQFKLLLRKYGRALD*KELFFLKACLPFMFLTAAKDMLLRIIYSAV 1084
            I+AN                                           + +M+ RIIYS  
Sbjct: 374  IMAN-------------------------------------------SLNMIFRIIYSGK 390

Query: 1085 FIKSYFQDAQSFSFRQCLPSGWVVLLVSGVATFFSERIFLDRMNFWPTMFIHFSVGLVFF 1264
            FI+ YFQ   SFSFR+C P GW +L++S + T  SE+  LDR NFW T  +HF++G + F
Sbjct: 391  FIQRYFQGTSSFSFRKCFPLGWQILILSSIITLISEKTILDRKNFWETFPLHFAIGFICF 450

Query: 1265 SISTVVIYNQEGPFIKKIIRFRDH 1336
             +S +VIY +E  FIK+IIRFRD+
Sbjct: 451  CLSAIVIYRRERVFIKRIIRFRDY 474