BLASTX nr result
ID: Coptis24_contig00017799
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017799 (562 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267... 132 2e-33 emb|CBI37340.3| unnamed protein product [Vitis vinifera] 132 2e-33 emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera] 131 1e-32 ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Popu... 117 2e-24 ref|NP_189132.2| Helicase/SANT-associated, DNA binding protein [... 115 6e-24 >ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267035 [Vitis vinifera] Length = 2022 Score = 132 bits (331), Expect(2) = 2e-33 Identities = 76/147 (51%), Positives = 94/147 (63%), Gaps = 9/147 (6%) Frame = -1 Query: 484 SELGTRDNLHEEDEGEAGGYYFPGGFEXXXXXXXXXXKRKHLQKSC-ARSYDVGADLPYG 308 +E G+++N ++EDEGE YY PGGFE K+K+ K AR Y++G+D PYG Sbjct: 825 AEFGSQENCYDEDEGETSTYYLPGGFEGSKPSKYSQKKKKNSIKPYNARPYEMGSDFPYG 884 Query: 307 QFVENKVGTQNPLILGKRPPNNLNVGSIPIKRV-----QRVVS---AGVAGGVQMPFKAD 152 +G Q +GKRP N+LNVGSIP KRV QR +S AGV G VQ P K D Sbjct: 885 HCT---IGAQQSAFMGKRPANSLNVGSIPTKRVRTASRQRGLSPFGAGVTGCVQAPNKTD 941 Query: 151 ASSGDTSSYQDDQSIVHGGSHIWKTLE 71 ASSGDTSS+QDDQS +HGGS I K+LE Sbjct: 942 ASSGDTSSFQDDQSTLHGGSQIQKSLE 968 Score = 36.2 bits (82), Expect(2) = 2e-33 Identities = 16/28 (57%), Positives = 21/28 (75%) Frame = -3 Query: 86 LENSGDYGEQLPFDCTEVSMKPRKKKNA 3 +E+ D+ +QLPFD EVS KP+KKK A Sbjct: 969 VESVVDFEKQLPFDSAEVSTKPKKKKKA 996 >emb|CBI37340.3| unnamed protein product [Vitis vinifera] Length = 1688 Score = 132 bits (331), Expect(2) = 2e-33 Identities = 76/147 (51%), Positives = 94/147 (63%), Gaps = 9/147 (6%) Frame = -1 Query: 484 SELGTRDNLHEEDEGEAGGYYFPGGFEXXXXXXXXXXKRKHLQKSC-ARSYDVGADLPYG 308 +E G+++N ++EDEGE YY PGGFE K+K+ K AR Y++G+D PYG Sbjct: 750 AEFGSQENCYDEDEGETSTYYLPGGFEGSKPSKYSQKKKKNSIKPYNARPYEMGSDFPYG 809 Query: 307 QFVENKVGTQNPLILGKRPPNNLNVGSIPIKRV-----QRVVS---AGVAGGVQMPFKAD 152 +G Q +GKRP N+LNVGSIP KRV QR +S AGV G VQ P K D Sbjct: 810 HCT---IGAQQSAFMGKRPANSLNVGSIPTKRVRTASRQRGLSPFGAGVTGCVQAPNKTD 866 Query: 151 ASSGDTSSYQDDQSIVHGGSHIWKTLE 71 ASSGDTSS+QDDQS +HGGS I K+LE Sbjct: 867 ASSGDTSSFQDDQSTLHGGSQIQKSLE 893 Score = 36.2 bits (82), Expect(2) = 2e-33 Identities = 16/28 (57%), Positives = 21/28 (75%) Frame = -3 Query: 86 LENSGDYGEQLPFDCTEVSMKPRKKKNA 3 +E+ D+ +QLPFD EVS KP+KKK A Sbjct: 894 VESVVDFEKQLPFDSAEVSTKPKKKKKA 921 >emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera] Length = 2257 Score = 131 bits (330), Expect(2) = 1e-32 Identities = 76/146 (52%), Positives = 93/146 (63%), Gaps = 9/146 (6%) Frame = -1 Query: 481 ELGTRDNLHEEDEGEAGGYYFPGGFEXXXXXXXXXXKRKHLQKSC-ARSYDVGADLPYGQ 305 E G+++N ++EDEGE YY PGGFE K+K+ K AR Y++G+D PYG Sbjct: 812 EFGSQENCYDEDEGETSTYYLPGGFEGSKPSKYSQKKKKNSIKPYNARPYEMGSDFPYGH 871 Query: 304 FVENKVGTQNPLILGKRPPNNLNVGSIPIKRV-----QRVVS---AGVAGGVQMPFKADA 149 +G Q +GKRP N+LNVGSIP KRV QR +S AGV G VQ P K DA Sbjct: 872 CT---IGAQQSAFMGKRPANSLNVGSIPTKRVRTASRQRGLSPFGAGVTGCVQAPNKTDA 928 Query: 148 SSGDTSSYQDDQSIVHGGSHIWKTLE 71 SSGDTSS+QDDQS +HGGS I K+LE Sbjct: 929 SSGDTSSFQDDQSTLHGGSQIQKSLE 954 Score = 33.9 bits (76), Expect(2) = 1e-32 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = -3 Query: 86 LENSGDYGEQLPFDCTEVSMKPRKKKNA 3 +E+ D+ + LPFD EVS KP+KKK A Sbjct: 955 VESVVDFEKXLPFDSAEVSTKPKKKKKA 982 >ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Populus trichocarpa] gi|222844768|gb|EEE82315.1| hypothetical protein POPTRDRAFT_756271 [Populus trichocarpa] Length = 2006 Score = 117 bits (292), Expect = 2e-24 Identities = 74/146 (50%), Positives = 90/146 (61%), Gaps = 10/146 (6%) Frame = -1 Query: 457 HEEDEGEAGGYYFPGGFEXXXXXXXXXXKRKHLQKS-CARSYDVGADLPYGQFVENKVGT 281 ++E+EGE YY G FE KRK L KS ARSYD+G D PYG G Sbjct: 818 YDEEEGETSAYYMHGVFEGSKSAKHDQKKRKSLTKSPSARSYDLGTDSPYGHCT---TGP 874 Query: 280 QNPLILGKRPPNNLNVGSIPIKRV-----QRVVS---AGVAGGV-QMPFKADASSGDTSS 128 Q +++GKRP +NLN GSIP KR+ QR S AG AG + Q P K DASSGDT+S Sbjct: 875 QQNVLMGKRPASNLNAGSIPTKRMRTASRQRFTSPFTAGTAGVLLQAPVKTDASSGDTNS 934 Query: 127 YQDDQSIVHGGSHIWKTLETMESNYH 50 +QDDQSI+HGGS I K++E +ES H Sbjct: 935 FQDDQSILHGGSQIQKSVE-VESAAH 959 >ref|NP_189132.2| Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana] gi|332643436|gb|AEE76957.1| Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana] Length = 1957 Score = 115 bits (287), Expect = 6e-24 Identities = 68/150 (45%), Positives = 87/150 (58%), Gaps = 9/150 (6%) Frame = -1 Query: 481 ELGTRDNLHEEDEGEAGGYYFPGGFEXXXXXXXXXXKRKHLQKS-CARSYDVGADLPYGQ 305 ++G +EDEGE YY PG FE KRK+L KS ARSYD+G DLPY Sbjct: 770 DIGYNVTAFDEDEGETSTYYLPGAFESSRSFNISHKKRKNLMKSHSARSYDLGDDLPY-- 827 Query: 304 FVENKVGTQNPLILGKRPPNNLNVGSIPIKRV-----QRVVS---AGVAGGVQMPFKADA 149 V N G+ + ++ KRP +N+N GS+P +RV QRVVS G + +P K DA Sbjct: 828 -VNNTGGSNSSSLMAKRPDSNINAGSVPTRRVRTASRQRVVSPFGCATTGNLPVPSKTDA 886 Query: 148 SSGDTSSYQDDQSIVHGGSHIWKTLETMES 59 SSGDTSS+QD+ S +HGGS + K E S Sbjct: 887 SSGDTSSFQDEYSSLHGGSAVQKGTEVESS 916