BLASTX nr result

ID: Coptis24_contig00017796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017796
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635207.1| PREDICTED: uncharacterized protein LOC100853...    60   2e-07
ref|XP_002521422.1| conserved hypothetical protein [Ricinus comm...    56   3e-06
ref|XP_003635208.1| PREDICTED: uncharacterized protein LOC100853...    55   8e-06

>ref|XP_003635207.1| PREDICTED: uncharacterized protein LOC100853563 [Vitis vinifera]
          Length = 60

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/46 (67%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +3

Query: 33  MAGARRMMKVNNAN-GQRVSGRPIPKRGQVKAGIAIGLAHSLSAIF 167
           MAG RR M +N  N  QR SGRPIPKRGQVK GI +GLAHS+++IF
Sbjct: 1   MAGGRRAM-INGGNFSQRFSGRPIPKRGQVKVGIVVGLAHSVASIF 45


>ref|XP_002521422.1| conserved hypothetical protein [Ricinus communis]
           gi|223539321|gb|EEF40912.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 62

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/68 (47%), Positives = 39/68 (57%)
 Frame = +3

Query: 33  MAGARRMMKVNNANGQRVSGRPIPKRGQVKAGIAIGLAHSLSAIFXXXXXXXXXXXXXMA 212
           M  AR  M  +    +R+SGRPIPKRGQVK GI +GLAHS+++IF              A
Sbjct: 1   MEWARMGMMSDRKVSRRLSGRPIPKRGQVKVGIVVGLAHSVASIF------SHSHSSRRA 54

Query: 213 QPTRIHFS 236
            PT  HFS
Sbjct: 55  APTASHFS 62


>ref|XP_003635208.1| PREDICTED: uncharacterized protein LOC100853596 [Vitis vinifera]
          Length = 60

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/45 (60%), Positives = 32/45 (71%)
 Frame = +3

Query: 33  MAGARRMMKVNNANGQRVSGRPIPKRGQVKAGIAIGLAHSLSAIF 167
           MAG R  M    +  QR SGRPIPKRGQVK  IA+G AHS+++IF
Sbjct: 1   MAGGRGDMINGGSFSQRFSGRPIPKRGQVKVAIAVGFAHSVASIF 45


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