BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017788
         (1952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001441810.1| hypothetical protein [Paramecium tetraurelia...    65   9e-08
ref|XP_001579765.1| viral A-type inclusion protein [Trichomonas ...    62   7e-07
gb|ACU78733.1| conserved hypothetical protein [Mycoplasma mycoid...    60   2e-06
ref|XP_001579764.1| viral A-type inclusion protein [Trichomonas ...    60   2e-06
ref|YP_005472617.1| putative ATP binding protein [Caldisericum e...    60   2e-06

>ref|XP_001441810.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
            gi|124409071|emb|CAK74413.1| unnamed protein product
            [Paramecium tetraurelia]
          Length = 1479

 Score = 64.7 bits (156), Expect = 9e-08
 Identities = 60/285 (21%), Positives = 130/285 (45%), Gaps = 3/285 (1%)
 Frame = -2

Query: 898  NETVILTKDSAAKNTKSVKENKRQNKMQEQRIQHPLASTVRGNSTHGGKPQNLLTMKQRC 719
            NE  I+ K + + +  S++E+  Q K Q Q++Q  + +    N     K Q + T+KQ+ 
Sbjct: 734  NERQIIDKQALSNDLNSIQESNSQFKQQIQQLQDQINNI---NEILLAKDQEIQTLKQK- 789

Query: 718  SSLEDEVKESPGITPMEGLKKYQKCDQNTENIGEY---DRAMSMIFDSINQVKTAVVRAK 548
              L+D+VKE    T    +K  +  +   E + +    D  +  + D++ Q K       
Sbjct: 790  --LQDQVKEINLKTQEYEIKNVELNNIKEEGLKKLKCKDDEILQLQDNLEQQKIKY---- 843

Query: 547  EIHEKVVKKNIVLNEVNALEEIKKVKILNQKLEEANKALSGTIKELEDENKNLXXXXXXX 368
            E    V+++N+   ++N  ++ +++  +N     AN+ L  + KEL+D+NK L       
Sbjct: 844  ESQSLVLQQNLEQLQINLKKKEEEISRINS----ANEELKASNKELQDQNKILQG----- 894

Query: 367  XXXXXXEFGKACEITEEHKHLKADVIELKSLVATKDQELKRAQKEVEKNNKRMTDLNERL 188
                        +  ++ ++L   ++ +++++  KD E++  Q E+    + +    ER 
Sbjct: 895  ------------QSLQQEQNLNLRIVNIEAIIEDKDDEIQLKQNELNDLKESINTYLERF 942

Query: 187  GQDHVQMAHCESSVRQLTETLIETGDELEREKMNYKDLYELYMRK 53
              D   +   +  +R L   + E  ++ E EK+ ++   ++  +K
Sbjct: 943  SCDQQIIQKQQFEIRILQNQIEELKNQGEFEKLEFQQQLQIKKQK 987


>ref|XP_001579765.1| viral A-type inclusion protein [Trichomonas vaginalis G3]
            gi|121913975|gb|EAY18779.1| viral A-type inclusion
            protein, putative [Trichomonas vaginalis G3]
          Length = 883

 Score = 61.6 bits (148), Expect = 7e-07
 Identities = 93/445 (20%), Positives = 188/445 (42%), Gaps = 22/445 (4%)
 Frame = -2

Query: 1363 DIELDKEVESNLRFFFHECSDERLA--DLSYFDDIVDFRNYGGIEQR-PDMSKETQSEMA 1193
            +I++ K+ E+NL+    E  DE+LA  D +  D     +      Q   +  KE Q E+ 
Sbjct: 400  EIDVLKQKETNLQNLISE-QDEKLAKQDQAIKDSQDKIKQLEEAAQNHSEEEKEKQFEII 458

Query: 1192 KKSKSLRNAIFGSDSESEKEDGTELTQ-RELVLSLPSKKS------ELYKRRCATRKRAN 1034
            +      + +   +SE  K++  +  Q  ELV SL ++ +      +LYK +  T    +
Sbjct: 459  QMITKENDDLKAQNSEYVKQNQEKDRQIEELVQSLSNENNNNADIQKLYKEKEETELLIS 518

Query: 1033 --GDQ--ENKPTLQCMMPRGTRLQCTKHSRRKIIHTXXXXXXXXXXXXKNETVILTKDSA 866
              GD+  +    +Q  +    +L  T   + ++I+                   +TKD++
Sbjct: 519  QLGDEITQLNTKIQEKVDEVNQLTETILDKEEVINA------------------VTKDNS 560

Query: 865  AKNTKSVKENKRQNKMQEQRIQHPLASTVRGNSTHGGKPQNLLTMKQRCSSLEDEVKESP 686
              N K  + N   ++M ++  +               K + +  + ++   L + +KE  
Sbjct: 561  DLNNKIAELNNAISEMTKEITE---------------KEEKINELNRKIEELNNVIKEKE 605

Query: 685  GITPMEGLKKYQKCDQNTENIGEYDRAMSMIFDSINQVKTAVVRAKEIHEKVVKKNIVLN 506
                    K  +  +   E I E +   + I +  NQ+K    +  E++ +  +K   ++
Sbjct: 606  EEINRFSSKISELNESINEKINEINNTNTAINELNNQIKEKDEKINELNNQNQEKQNKID 665

Query: 505  EVNALEEI-----KKVKILNQKLEEANKALSGTIKELEDENKNLXXXXXXXXXXXXXEFG 341
            E+N L         K   LN++  E    ++   KE+E  N +                 
Sbjct: 666  ELNELNNTVQQNETKFGELNKENREKENRINELNKEIERINNSSSEKDKTIANLNESLLE 725

Query: 340  KACEITEEHKHLKADVIELKSLVATKDQELKRAQKEVEKNNKRMTDLNERLGQDHVQMAH 161
            K  EIT++ + +K    EL+  V TK+ E+ +  + +  NN ++ +LN+++ + + Q++ 
Sbjct: 726  KDNEITKKDELIK----ELQESVQTKETEINQKNELISSNNTKIDELNQQINELNAQISD 781

Query: 160  CESSVRQLTE---TLIETGDELERE 95
             E+S++++T+   TL ET    E E
Sbjct: 782  KENSLKEITDKVHTLEETVQNKETE 806



 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 57/252 (22%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
 Frame = -2

Query: 853  KSVKENKRQNKMQEQRIQ--HPLASTVRGNSTHGGKPQNLLTMKQ-RCSSLEDEVKESPG 683
            + + E   QN+ ++ +I   + L +TV+ N T  G+       K+ R + L  E++    
Sbjct: 648  EKINELNNQNQEKQNKIDELNELNNTVQQNETKFGELNKENREKENRINELNKEIERINN 707

Query: 682  ITPMEGLKKYQKCDQNTENIGEYDRAMSMIFDSINQVKTAVVRAKEIHEKVVKKNIVLNE 503
             +  +        D+   N+ E       + +  N++       KE+ E V  K   +N+
Sbjct: 708  SSSEK--------DKTIANLNE------SLLEKDNEITKKDELIKELQESVQTKETEINQ 753

Query: 502  VNALEEIKKVKI--LNQKLEEANKALS---GTIKELEDENKNLXXXXXXXXXXXXXEFGK 338
             N L      KI  LNQ++ E N  +S    ++KE+ D+   L                K
Sbjct: 754  KNELISSNNTKIDELNQQINELNAQISDKENSLKEITDKVHTLEETVQ----------NK 803

Query: 337  ACEITEEHKHL---KADVIELKSLVATKDQELKRAQKEVEKNNKRMTDLNERLGQDHVQM 167
              EI ++++ L   +  + EL  +++ KD E+++  +E+  NN ++ +LN+       Q+
Sbjct: 804  ETEINQKNEELSERETKINELNEIISQKDSEIQQKNEEISSNNSKIEELNQ-------QI 856

Query: 166  AHCESSVRQLTE 131
            ++ E+S+++LT+
Sbjct: 857  SNKENSLQELTD 868


>gb|ACU78733.1| conserved hypothetical protein [Mycoplasma mycoides subsp. capri
           str. GM12] gi|256384995|gb|ACU79564.1| conserved
           hypothetical protein [Mycoplasma mycoides subsp. capri
           str. GM12] gi|296455366|gb|ADH21601.1| conserved
           hypothetical protein [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
          Length = 746

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 56/228 (24%), Positives = 112/228 (49%), Gaps = 24/228 (10%)
 Frame = -2

Query: 682 ITPMEGLKKYQKCDQNTENIGEYDRAMSMIFDSINQ-------VKTAVVRAKEIHEKV-- 530
           IT +E LKK  + DQ  +N  +  + ++ I + IN+       +KT + R K++ +++  
Sbjct: 168 ITEIESLKK--ELDQLNKNKDKKQQEIATIKNQINKDYLLLFKLKTKISRYKKLEKELLE 225

Query: 529 ------------VKKNIVLNEVNALEEIKKVKILNQKLEEANKALSGTIK---ELEDENK 395
                       ++K + LN+  A+ + K+ + LN  L+E NK +    K   ELE+ NK
Sbjct: 226 LNKQTNTLTDSKIQKQVELNQQKAVLKEKQTQ-LNNLLDELNKNIDQLNKNNNELENINK 284

Query: 394 NLXXXXXXXXXXXXXEFGKACEITEEHKHLKADVIELKSLVATKDQELKRAQKEVEKNNK 215
            +                   +I+E  K  +AD+ ++ S +  K++E++  Q ++++ N 
Sbjct: 285 QIKETEDQIQTIKT-------KISELKKEKQADIDKVNSEIRNKEKEIRDLQTQLDQTNS 337

Query: 214 RMTDLNERLGQDHVQMAHCESSVRQLTETLIETGDELEREKMNYKDLY 71
           +++ LN+++     Q  +  S    LTE L +  +EL ++ +N K+ Y
Sbjct: 338 QISSLNQQINDLEKQKQNSTSENNTLTEQLEKKKNEL-KQLINQKESY 384


>ref|XP_001579764.1| viral A-type inclusion protein [Trichomonas vaginalis G3]
            gi|121913974|gb|EAY18778.1| viral A-type inclusion
            protein, putative [Trichomonas vaginalis G3]
          Length = 3369

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 57/286 (19%), Positives = 125/286 (43%), Gaps = 19/286 (6%)
 Frame = -2

Query: 853  KSVKENKRQNKMQEQRIQHPLASTVRGNSTHGGKPQNLLTMKQRCSSLEDEVKESPGITP 674
            K  KENK   ++  Q I                K + +   K   SSL++++ E      
Sbjct: 868  KKDKENKEFEELMSQAISE--------------KDEEISKSKNGISSLQEKLAEKEKEIN 913

Query: 673  MEGLKKYQKCDQNTENIGEYDRAMSMIFDSINQVKTAVV-----------RAKEIHEKVV 527
             +      + ++N++ I + D  +S +  SI++++  +            +  E+ E++ 
Sbjct: 914  SKNEANTAEKEENSKLISQRDEEISNLNKSIDELRKEISTKDETISQFESKINELIEEIS 973

Query: 526  KKNIVLNEVNAL-----EEIKKVKILNQKLEEANKALSGTIKELEDENKNLXXXXXXXXX 362
            KK + +NE         E+I + +     L+EA K +   I E+E +   L         
Sbjct: 974  KKELTINEKETKIAELNEQITQKENEINGLKEAEKVMETKISEIESQ---LTEKEKSINE 1030

Query: 361  XXXXEFGKACEITEEHKHL---KADVIELKSLVATKDQELKRAQKEVEKNNKRMTDLNER 191
                   K  EI ++++ L   +  + EL  +++ KD E+++  +E+  NN ++ +LN+ 
Sbjct: 1031 LEETVQNKETEINQKNEELSERETKINELNEIISQKDSEIQQKNEEISSNNSKIDELNQ- 1089

Query: 190  LGQDHVQMAHCESSVRQLTETLIETGDELEREKMNYKDLYELYMRK 53
                  Q+++ E+S+++LT+ +     +   ++   ++L +L   K
Sbjct: 1090 ------QISNKENSLQELTDKVHSLETKNSEQETQIEELTKLVSEK 1129


>ref|YP_005472617.1| putative ATP binding protein [Caldisericum exile AZM16c01]
            gi|381363685|dbj|BAL80514.1| putative ATP binding protein
            [Caldisericum exile AZM16c01]
          Length = 1027

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 52/229 (22%), Positives = 109/229 (47%), Gaps = 2/229 (0%)
 Frame = -2

Query: 754  KPQNLLTMKQRCSSLEDEVKESPGITPMEGLKKYQKCDQNTENIGEYDRAMSMIFDSINQ 575
            K  N+L  ++R  + E+ ++     +  + +K+Y+K  ++ EN    D     +F+S   
Sbjct: 398  KLNNILIKEERLKNEENNIRNLEK-SLNDSIKRYEKEKKDLENKISQDSKNLNLFNS--- 453

Query: 574  VKTAVVRAKEIHEKVVKKNIVLNEVNALEE-IKKVKILNQKLEEANKALSGTIKELEDEN 398
                      I E   K   +L + N L+E I K + + +++EE  + +SG  K LE EN
Sbjct: 454  ---------SIKENEGKLRALLEKKNKLQEKISKRETIQKEIEELLREISGLEKNLELEN 504

Query: 397  KNLXXXXXXXXXXXXXEFGKACEITEEH-KHLKADVIELKSLVATKDQELKRAQKEVEKN 221
            + +                    +TEEH K+L  D      +++++ +ELK  ++ +E N
Sbjct: 505  EKINLISETTTAKCPLC---GSPLTEEHKKNLLEDFKNNTIILSSQIKELKSKKEILENN 561

Query: 220  NKRMTDLNERLGQDHVQMAHCESSVRQLTETLIETGDELEREKMNYKDL 74
             K + DL+++L +  + +A  E S++   E      +E++ + ++ +++
Sbjct: 562  LKELEDLSQKLLETDISIAKVEESLKNFEEKKKNLEEEIKEKTLSLEEI 610