BLASTX nr result

ID: Coptis24_contig00017779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017779
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285068.1| PREDICTED: fasciclin-like arabinogalactan pr...   201   5e-50
emb|CAI99883.1| putative cell surface adhesion protein [Zinnia v...   201   2e-49
emb|CAN60933.1| hypothetical protein VITISV_022591 [Vitis vinifera]   198   1e-48
ref|XP_002519547.1| conserved hypothetical protein [Ricinus comm...   196   6e-48
ref|XP_002323464.1| predicted protein [Populus trichocarpa] gi|1...   189   7e-46

>ref|XP_002285068.1| PREDICTED: fasciclin-like arabinogalactan protein 11-like [Vitis
           vinifera]
          Length = 244

 Score =  201 bits (511), Expect(2) = 5e-50
 Identities = 100/146 (68%), Positives = 120/146 (82%)
 Frame = -3

Query: 842 KILEKAGQYNNLIRLLVSTQVGDQIDTQLNNSNQGMTLFAPTDNAFSSLKSGTLNSLTDQ 663
           +ILEKAGQY  LIRL+  TQV DQI+TQLNNSNQG+T+FAPTDNAFS+LK+GTLNSLTDQ
Sbjct: 39  QILEKAGQYTILIRLMKGTQVADQINTQLNNSNQGLTVFAPTDNAFSTLKAGTLNSLTDQ 98

Query: 662 DKVELLQFHVLPTFVSTAQFQTVSNPLRTQAGNANSGQFLLNVTTTGNQXXXXXXXXXXX 483
            KV+L+QFHV+P F+S +QFQTVSNPLRTQAGN+N+G+F LNVTT+GNQ           
Sbjct: 99  QKVQLIQFHVVPNFLSISQFQTVSNPLRTQAGNSNNGEFPLNVTTSGNQVNVSTGIVDAT 158

Query: 482 XXXTIYTDGKLAIYQVDKVLLPRSLF 405
              T+YTD +LA+YQVDKVLLP  +F
Sbjct: 159 VANTVYTDNQLAVYQVDKVLLPLDIF 184



 Score = 23.9 bits (50), Expect(2) = 5e-50
 Identities = 12/20 (60%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
 Frame = -1

Query: 949 FYSLVQFYYWPPSTL-QPSQ 893
           F+SLV F++  P+TL QPSQ
Sbjct: 8   FFSLVFFFFHFPATLAQPSQ 27


>emb|CAI99883.1| putative cell surface adhesion protein [Zinnia violacea]
          Length = 252

 Score =  201 bits (511), Expect = 2e-49
 Identities = 102/146 (69%), Positives = 118/146 (80%)
 Frame = -3

Query: 842 KILEKAGQYNNLIRLLVSTQVGDQIDTQLNNSNQGMTLFAPTDNAFSSLKSGTLNSLTDQ 663
           KILEKAGQ+  LIRL+ +TQ+GDQI+TQLNNSNQGMT+FAPTDNAFSSLK GTLNSL+DQ
Sbjct: 46  KILEKAGQFTTLIRLMKATQLGDQINTQLNNSNQGMTVFAPTDNAFSSLKPGTLNSLSDQ 105

Query: 662 DKVELLQFHVLPTFVSTAQFQTVSNPLRTQAGNANSGQFLLNVTTTGNQXXXXXXXXXXX 483
           DKV LLQFHV+PT+++T+Q QTVSNPLRTQAG+  S +F LNVT  GNQ           
Sbjct: 106 DKVSLLQFHVVPTYLTTSQLQTVSNPLRTQAGDTASNKFPLNVTAAGNQVNVSTGVVDTP 165

Query: 482 XXXTIYTDGKLAIYQVDKVLLPRSLF 405
              +IYTDG LA+YQVDKVLLP SLF
Sbjct: 166 VSNSIYTDGTLAVYQVDKVLLPMSLF 191


>emb|CAN60933.1| hypothetical protein VITISV_022591 [Vitis vinifera]
          Length = 214

 Score =  198 bits (504), Expect = 1e-48
 Identities = 99/146 (67%), Positives = 119/146 (81%)
 Frame = -3

Query: 842 KILEKAGQYNNLIRLLVSTQVGDQIDTQLNNSNQGMTLFAPTDNAFSSLKSGTLNSLTDQ 663
           +ILEKAGQY  LIRL+  TQV DQI+TQL NSNQG+T+FAPTDNAFS+LK+GTLNSLTDQ
Sbjct: 23  QILEKAGQYTILIRLMKGTQVADQINTQLXNSNQGLTVFAPTDNAFSTLKAGTLNSLTDQ 82

Query: 662 DKVELLQFHVLPTFVSTAQFQTVSNPLRTQAGNANSGQFLLNVTTTGNQXXXXXXXXXXX 483
            KV+L+QFHV+P F+S +QFQTVSNPLRTQAGN+N+G+F LNVTT+GNQ           
Sbjct: 83  QKVQLIQFHVVPNFLSISQFQTVSNPLRTQAGNSNNGEFPLNVTTSGNQVNVSTGIVDAT 142

Query: 482 XXXTIYTDGKLAIYQVDKVLLPRSLF 405
              T+YTD +LA+YQVDKVLLP  +F
Sbjct: 143 VANTVYTDNQLAVYQVDKVLLPLDIF 168


>ref|XP_002519547.1| conserved hypothetical protein [Ricinus communis]
           gi|223541410|gb|EEF42961.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 241

 Score =  196 bits (499), Expect = 6e-48
 Identities = 97/145 (66%), Positives = 118/145 (81%)
 Frame = -3

Query: 839 ILEKAGQYNNLIRLLVSTQVGDQIDTQLNNSNQGMTLFAPTDNAFSSLKSGTLNSLTDQD 660
           ILEKAGQ+   I+L++STQ   QI+TQLNNSNQG+T+FAP DNAF++LK+GTLNSLTDQ+
Sbjct: 41  ILEKAGQFTTFIKLMMSTQEASQINTQLNNSNQGLTVFAPPDNAFANLKAGTLNSLTDQE 100

Query: 659 KVELLQFHVLPTFVSTAQFQTVSNPLRTQAGNANSGQFLLNVTTTGNQXXXXXXXXXXXX 480
           KV+L+QFH+LPTF+S +QFQTVSNPLRTQAGN+ +G+F LNVTT+GNQ            
Sbjct: 101 KVQLMQFHILPTFISMSQFQTVSNPLRTQAGNSANGEFPLNVTTSGNQVNVTTGVDTATV 160

Query: 479 XXTIYTDGKLAIYQVDKVLLPRSLF 405
             TIYTDG LA+YQVDKVLLP  LF
Sbjct: 161 ANTIYTDGSLAVYQVDKVLLPLDLF 185


>ref|XP_002323464.1| predicted protein [Populus trichocarpa] gi|118481435|gb|ABK92660.1|
           unknown [Populus trichocarpa]
           gi|222868094|gb|EEF05225.1| predicted protein [Populus
           trichocarpa]
          Length = 239

 Score =  189 bits (481), Expect = 7e-46
 Identities = 95/145 (65%), Positives = 115/145 (79%)
 Frame = -3

Query: 839 ILEKAGQYNNLIRLLVSTQVGDQIDTQLNNSNQGMTLFAPTDNAFSSLKSGTLNSLTDQD 660
           IL KAGQ+  LIRLL STQ  DQI+TQLNNSNQG+T+FAPTDN+F++LK+GTLNSL+DQ 
Sbjct: 40  ILAKAGQFTTLIRLLKSTQEADQINTQLNNSNQGLTVFAPTDNSFANLKAGTLNSLSDQQ 99

Query: 659 KVELLQFHVLPTFVSTAQFQTVSNPLRTQAGNANSGQFLLNVTTTGNQXXXXXXXXXXXX 480
           KV+L+QFH+LP F+S + FQTVSNPLRTQAGN+  G+F LNVTT+GNQ            
Sbjct: 100 KVQLVQFHILPNFLSMSNFQTVSNPLRTQAGNSADGEFPLNVTTSGNQVNITTGVNTATV 159

Query: 479 XXTIYTDGKLAIYQVDKVLLPRSLF 405
             TIYTDG+L +YQVD+VLLP  LF
Sbjct: 160 ANTIYTDGQLVVYQVDQVLLPLDLF 184


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