BLASTX nr result

ID: Coptis24_contig00017773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017773
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26081.3| unnamed protein product [Vitis vinifera]              149   4e-34
ref|XP_002276207.1| PREDICTED: isoleucyl-tRNA synthetase-like [V...   149   4e-34
emb|CAN78050.1| hypothetical protein VITISV_015862 [Vitis vinifera]   149   4e-34
ref|XP_004164308.1| PREDICTED: isoleucine--tRNA ligase-like [Cuc...   139   5e-31
ref|XP_004134489.1| PREDICTED: isoleucine--tRNA ligase-like [Cuc...   139   5e-31

>emb|CBI26081.3| unnamed protein product [Vitis vinifera]
          Length = 1221

 Score =  149 bits (377), Expect = 4e-34
 Identities = 68/94 (72%), Positives = 83/94 (88%), Gaps = 1/94 (1%)
 Frame = -3

Query: 731  LSSKLHETCASSNDADELHRIFITSQVEILSSMGNGIAESIPYSGDCLIQGK-KVWVGVS 555
            L+ +L E C+++NDAD LHRIFITSQVEILSS+ + + ++IPY+G+ LIQGK K+W+GVS
Sbjct: 1117 LAPRLQEMCSTNNDADTLHRIFITSQVEILSSLDDELVKNIPYTGEYLIQGKNKIWIGVS 1176

Query: 554  RADGSKCERCWNYSTKVGSFSEHPTLCSRCYNVV 453
            RADGSKCERCWNYS +VGSFSEHPTLC RCYNVV
Sbjct: 1177 RADGSKCERCWNYSLQVGSFSEHPTLCGRCYNVV 1210


>ref|XP_002276207.1| PREDICTED: isoleucyl-tRNA synthetase-like [Vitis vinifera]
          Length = 1105

 Score =  149 bits (377), Expect = 4e-34
 Identities = 68/94 (72%), Positives = 83/94 (88%), Gaps = 1/94 (1%)
 Frame = -3

Query: 731  LSSKLHETCASSNDADELHRIFITSQVEILSSMGNGIAESIPYSGDCLIQGK-KVWVGVS 555
            L+ +L E C+++NDAD LHRIFITSQVEILSS+ + + ++IPY+G+ LIQGK K+W+GVS
Sbjct: 1001 LAPRLQEMCSTNNDADTLHRIFITSQVEILSSLDDELVKNIPYTGEYLIQGKNKIWIGVS 1060

Query: 554  RADGSKCERCWNYSTKVGSFSEHPTLCSRCYNVV 453
            RADGSKCERCWNYS +VGSFSEHPTLC RCYNVV
Sbjct: 1061 RADGSKCERCWNYSLQVGSFSEHPTLCGRCYNVV 1094


>emb|CAN78050.1| hypothetical protein VITISV_015862 [Vitis vinifera]
          Length = 1088

 Score =  149 bits (377), Expect = 4e-34
 Identities = 68/94 (72%), Positives = 83/94 (88%), Gaps = 1/94 (1%)
 Frame = -3

Query: 731  LSSKLHETCASSNDADELHRIFITSQVEILSSMGNGIAESIPYSGDCLIQGK-KVWVGVS 555
            L+ +L E C+++NDAD LHRIFITSQVEILSS+ + + ++IPY+G+ LIQGK K+W+GVS
Sbjct: 984  LAPRLREMCSTNNDADTLHRIFITSQVEILSSLDDELVKNIPYTGEYLIQGKNKIWIGVS 1043

Query: 554  RADGSKCERCWNYSTKVGSFSEHPTLCSRCYNVV 453
            RADGSKCERCWNYS +VGSFSEHPTLC RCYNVV
Sbjct: 1044 RADGSKCERCWNYSLQVGSFSEHPTLCGRCYNVV 1077


>ref|XP_004164308.1| PREDICTED: isoleucine--tRNA ligase-like [Cucumis sativus]
          Length = 1093

 Score =  139 bits (351), Expect = 5e-31
 Identities = 63/93 (67%), Positives = 76/93 (81%)
 Frame = -3

Query: 731  LSSKLHETCASSNDADELHRIFITSQVEILSSMGNGIAESIPYSGDCLIQGKKVWVGVSR 552
            LSSKL E C S++DAD L RIFITSQVE+  S+     E++PY+G+CLI G KVW+GVSR
Sbjct: 989  LSSKLCEMCESNHDADTLQRIFITSQVEVHQSIETEHIENVPYTGECLIGGNKVWIGVSR 1048

Query: 551  ADGSKCERCWNYSTKVGSFSEHPTLCSRCYNVV 453
            A+GSKCERCWN+S +VGSF EHPTLC RC+NVV
Sbjct: 1049 AEGSKCERCWNFSLRVGSFPEHPTLCKRCFNVV 1081


>ref|XP_004134489.1| PREDICTED: isoleucine--tRNA ligase-like [Cucumis sativus]
          Length = 1093

 Score =  139 bits (351), Expect = 5e-31
 Identities = 63/93 (67%), Positives = 76/93 (81%)
 Frame = -3

Query: 731  LSSKLHETCASSNDADELHRIFITSQVEILSSMGNGIAESIPYSGDCLIQGKKVWVGVSR 552
            LSSKL E C S++DAD L RIFITSQVE+  S+     E++PY+G+CLI G KVW+GVSR
Sbjct: 989  LSSKLCEMCESNHDADTLQRIFITSQVEVHQSIETEHIENVPYTGECLIGGNKVWIGVSR 1048

Query: 551  ADGSKCERCWNYSTKVGSFSEHPTLCSRCYNVV 453
            A+GSKCERCWN+S +VGSF EHPTLC RC+NVV
Sbjct: 1049 AEGSKCERCWNFSLRVGSFPEHPTLCKRCFNVV 1081


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