BLASTX nr result

ID: Coptis24_contig00017751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017751
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA35565.1| TPA: hypothetical protein ZEAMMB73_052546 [Zea m...   144   6e-33
ref|XP_002279875.1| PREDICTED: protein pelota [Vitis vinifera] g...   140   1e-31
emb|CAN70195.1| hypothetical protein VITISV_001356 [Vitis vinifera]   140   1e-31
ref|NP_194495.3| Eukaryotic release factor 1 (eRF1) family prote...   138   4e-31
ref|XP_002867488.1| hypothetical protein ARALYDRAFT_492022 [Arab...   138   4e-31

>tpg|DAA35565.1| TPA: hypothetical protein ZEAMMB73_052546 [Zea mays]
          Length = 378

 Score =  144 bits (364), Expect = 6e-33
 Identities = 68/92 (73%), Positives = 82/92 (89%)
 Frame = -3

Query: 276 MKIVRRDYIRNGPGYVRMIPEESDDLWVAYNLMAVGDFVLADTVRKVLREAASGGRDAER 97
           MKIV RD +RNGPG V+++PEE DDLW AYNL+A+GD + A TVRKVLRE ASGGRDAER
Sbjct: 1   MKIVHRDLVRNGPGSVKLVPEEEDDLWHAYNLIAIGDSLQAVTVRKVLREVASGGRDAER 60

Query: 96  VRLKLEIKLESIDYDKEGSVLRLRGKNVTQNE 1
           V+LKLEI +ES+DYDKEGSVLR+RGKN+T+N+
Sbjct: 61  VKLKLEIVVESVDYDKEGSVLRVRGKNITEND 92


>ref|XP_002279875.1| PREDICTED: protein pelota [Vitis vinifera]
           gi|297735305|emb|CBI17667.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/92 (73%), Positives = 79/92 (85%)
 Frame = -3

Query: 276 MKIVRRDYIRNGPGYVRMIPEESDDLWVAYNLMAVGDFVLADTVRKVLREAASGGRDAER 97
           MKI+RRD + NGPG V+M+P +SDDLW AYNL+A GD VLA TVRKVLRE ASGGRDAER
Sbjct: 1   MKIIRRDLVANGPGSVKMVPVDSDDLWYAYNLIAPGDTVLAVTVRKVLREVASGGRDAER 60

Query: 96  VRLKLEIKLESIDYDKEGSVLRLRGKNVTQNE 1
           V+LKLEIK+E  DYDK GSVLR+RGKN+ +NE
Sbjct: 61  VKLKLEIKVEVADYDKVGSVLRIRGKNILENE 92


>emb|CAN70195.1| hypothetical protein VITISV_001356 [Vitis vinifera]
          Length = 782

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/92 (73%), Positives = 79/92 (85%)
 Frame = -3

Query: 276 MKIVRRDYIRNGPGYVRMIPEESDDLWVAYNLMAVGDFVLADTVRKVLREAASGGRDAER 97
           MKI+RRD + NGPG V+M+P +SDDLW AYNL+A GD VLA TVRKVLRE ASGGRDAER
Sbjct: 1   MKIIRRDLVANGPGSVKMVPVDSDDLWYAYNLIAPGDTVLAVTVRKVLREVASGGRDAER 60

Query: 96  VRLKLEIKLESIDYDKEGSVLRLRGKNVTQNE 1
           V+LKLEIK+E  DYDK GSVLR+RGKN+ +NE
Sbjct: 61  VKLKLEIKVEVADYDKVGSVLRIRGKNILENE 92


>ref|NP_194495.3| Eukaryotic release factor 1 (eRF1) family protein [Arabidopsis
           thaliana] gi|3941543|gb|AAC82379.1| pelota [Arabidopsis
           thaliana] gi|4469016|emb|CAB38277.1| pelota (PEL1)
           [Arabidopsis thaliana] gi|7269619|emb|CAB81415.1| pelota
           (PEL1) [Arabidopsis thaliana] gi|18377690|gb|AAL66995.1|
           putative pelota (PEL1) protein [Arabidopsis thaliana]
           gi|20465995|gb|AAM20219.1| putative pelota protein
           (PEL1) [Arabidopsis thaliana]
           gi|332659974|gb|AEE85374.1| Eukaryotic release factor 1
           (eRF1) family protein [Arabidopsis thaliana]
          Length = 378

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/92 (68%), Positives = 80/92 (86%)
 Frame = -3

Query: 276 MKIVRRDYIRNGPGYVRMIPEESDDLWVAYNLMAVGDFVLADTVRKVLREAASGGRDAER 97
           MKIVRRD++RNGPG V+M+ E+SDDLW AYNL+AVGD V+A T RKV RE   GGRD+ER
Sbjct: 1   MKIVRRDFVRNGPGSVKMVAEDSDDLWYAYNLIAVGDSVMAVTFRKVQREIPGGGRDSER 60

Query: 96  VRLKLEIKLESIDYDKEGSVLRLRGKNVTQNE 1
           V+LKLE+++E +DYDK+GSVLR+RGKN+ +NE
Sbjct: 61  VKLKLEVQVEEVDYDKDGSVLRIRGKNILENE 92


>ref|XP_002867488.1| hypothetical protein ARALYDRAFT_492022 [Arabidopsis lyrata subsp.
           lyrata] gi|297313324|gb|EFH43747.1| hypothetical protein
           ARALYDRAFT_492022 [Arabidopsis lyrata subsp. lyrata]
          Length = 378

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/92 (68%), Positives = 80/92 (86%)
 Frame = -3

Query: 276 MKIVRRDYIRNGPGYVRMIPEESDDLWVAYNLMAVGDFVLADTVRKVLREAASGGRDAER 97
           MKIVRRD++RNGPG V+M+ E+SDDLW AYNL+AVGD V+A T RKV RE   GGRD+ER
Sbjct: 1   MKIVRRDFVRNGPGSVKMVAEDSDDLWYAYNLIAVGDSVMAVTFRKVQREIPGGGRDSER 60

Query: 96  VRLKLEIKLESIDYDKEGSVLRLRGKNVTQNE 1
           V+LKLE+++E +DYDK+GSVLR+RGKN+ +NE
Sbjct: 61  VKLKLEVQVEEVDYDKDGSVLRIRGKNILENE 92


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