BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017737
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002866276.1| hypothetical protein ARALYDRAFT_495982 [Arab...   111   7e-23
ref|NP_200667.2| Ran-binding protein 1-c [Arabidopsis thaliana] ...   110   9e-23
dbj|BAA97328.1| unnamed protein product [Arabidopsis thaliana]        110   9e-23
ref|XP_002892383.1| hypothetical protein ARALYDRAFT_334013 [Arab...   108   3e-22
ref|NP_172194.1| Ran-binding protein 1-a [Arabidopsis thaliana] ...   107   1e-21

>ref|XP_002866276.1| hypothetical protein ARALYDRAFT_495982 [Arabidopsis lyrata subsp.
           lyrata] gi|297312111|gb|EFH42535.1| hypothetical protein
           ARALYDRAFT_495982 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score =  111 bits (277), Expect = 7e-23
 Identities = 56/96 (58%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
 Frame = -1

Query: 350 KFERKHDHWNELCVGTVNLLKHKLTGKVRLVMR-SKSLKIYVNHRISSGMLVDAHASNSK 174
           +F+++ + W E   GTV LLKHK TGKVRLVMR SK+LKI  NH ISSGM V  H+ N K
Sbjct: 57  RFDKEGNQWKERGAGTVKLLKHKQTGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEK 116

Query: 173 SCVWSAIDFSDKVVK-KRFCIQFLSVKNCDTFMQLF 69
           SC+W A DFSD  +K + FCI+F S++NC TFM+ F
Sbjct: 117 SCLWHATDFSDGELKDELFCIRFASIENCKTFMEKF 152


>ref|NP_200667.2| Ran-binding protein 1-c [Arabidopsis thaliana]
           gi|75275082|sp|P92985.1|RBP1C_ARATH RecName:
           Full=Ran-binding protein 1 homolog c
           gi|1732511|gb|AAB38776.1| Ran binding protein 1 homolog
           [Arabidopsis thaliana] gi|90568020|gb|ABD94080.1|
           At5g58590 [Arabidopsis thaliana]
           gi|332009690|gb|AED97073.1| Ran-binding protein 1-c
           [Arabidopsis thaliana]
          Length = 219

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/96 (58%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
 Frame = -1

Query: 350 KFERKHDHWNELCVGTVNLLKHKLTGKVRLVMR-SKSLKIYVNHRISSGMLVDAHASNSK 174
           +F+++ + W E   GTV LLKHK TGKVRLVMR SK+LKI  NH ISSGM V  H+ N K
Sbjct: 57  RFDKEGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEK 116

Query: 173 SCVWSAIDFSDKVVK-KRFCIQFLSVKNCDTFMQLF 69
           SC+W A DFSD  +K + FCI+F S++NC TFM+ F
Sbjct: 117 SCLWHATDFSDGELKDELFCIRFASIENCKTFMEKF 152


>dbj|BAA97328.1| unnamed protein product [Arabidopsis thaliana]
          Length = 248

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/96 (58%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
 Frame = -1

Query: 350 KFERKHDHWNELCVGTVNLLKHKLTGKVRLVMR-SKSLKIYVNHRISSGMLVDAHASNSK 174
           +F+++ + W E   GTV LLKHK TGKVRLVMR SK+LKI  NH ISSGM V  H+ N K
Sbjct: 57  RFDKEGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEK 116

Query: 173 SCVWSAIDFSDKVVK-KRFCIQFLSVKNCDTFMQLF 69
           SC+W A DFSD  +K + FCI+F S++NC TFM+ F
Sbjct: 117 SCLWHATDFSDGELKDELFCIRFASIENCKTFMEKF 152


>ref|XP_002892383.1| hypothetical protein ARALYDRAFT_334013 [Arabidopsis lyrata subsp.
           lyrata] gi|297338225|gb|EFH68642.1| hypothetical protein
           ARALYDRAFT_334013 [Arabidopsis lyrata subsp. lyrata]
          Length = 705

 Score =  108 bits (271), Expect = 3e-22
 Identities = 55/99 (55%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
 Frame = -1

Query: 356 LSKFERKHDHWNELCVGTVNLLKHKLTGKVRLVMR-SKSLKIYVNHRISSGMLVDAHASN 180
           L +F++  + W E   GTV LLKHK TGK+RLVMR SK+LKI  NH + SGM V  H  N
Sbjct: 533 LYRFDKDANQWKERGAGTVKLLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGN 592

Query: 179 SKSCVWSAIDFSDKVVK-KRFCIQFLSVKNCDTFMQLFR 66
            KSCVW A DF+D  +K + FCI+F S++NC TFMQ F+
Sbjct: 593 EKSCVWHARDFADGELKDELFCIRFASIENCKTFMQKFK 631


>ref|NP_172194.1| Ran-binding protein 1-a [Arabidopsis thaliana]
           gi|75264036|sp|Q9LMK7.1|RBP1A_ARATH RecName:
           Full=Ran-binding protein 1 homolog a; AltName:
           Full=Ran-binding protein siRanBP
           gi|8954032|gb|AAF82206.1|AC067971_14 Identical to
           atranbp1a from Arabidopsis thaliana gb|X97377. It
           contains a RanBP1 domain PF|00638. ESTs gb|H76544,
           gb|H76880, gb|AA389814, gb|AA712542, gb|T88156,
           gb|N65434 and gb|AA712288 come from this gene
           [Arabidopsis thaliana]
           gi|13877581|gb|AAK43868.1|AF370491_1 Unknown protein
           [Arabidopsis thaliana]
           gi|15294206|gb|AAK95280.1|AF410294_1 At1g07140/F10K1_27
           [Arabidopsis thaliana] gi|20453283|gb|AAM19880.1|
           At1g07140/F10K1_27 [Arabidopsis thaliana]
           gi|25084245|gb|AAN72204.1| Unknown protein [Arabidopsis
           thaliana] gi|332189960|gb|AEE28081.1| Ran-binding
           protein 1-a [Arabidopsis thaliana]
          Length = 228

 Score =  107 bits (267), Expect = 1e-21
 Identities = 54/99 (54%), Positives = 68/99 (68%), Gaps = 2/99 (2%)
 Frame = -1

Query: 356 LSKFERKHDHWNELCVGTVNLLKHKLTGKVRLVMR-SKSLKIYVNHRISSGMLVDAHASN 180
           L +F++  + W E   GTV  LKHK TGK+RLVMR SK+LKI  NH + SGM V  H  N
Sbjct: 56  LYRFDKDANQWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGN 115

Query: 179 SKSCVWSAIDFSDKVVK-KRFCIQFLSVKNCDTFMQLFR 66
            KSCVW A DF+D  +K + FCI+F S++NC TFMQ F+
Sbjct: 116 EKSCVWHARDFADGELKDELFCIRFASIENCKTFMQKFK 154