BLASTX nr result

ID: Coptis24_contig00017732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017732
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [S...   216   5e-54
gb|EEC77085.1| hypothetical protein OsI_15489 [Oryza sativa Indi...   214   2e-53
emb|CAD40616.1| OSJNBb0066J23.21 [Oryza sativa Japonica Group] g...   214   2e-53
ref|XP_002449443.1| hypothetical protein SORBIDRAFT_05g011880 [S...   213   4e-53
ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [S...   212   6e-53

>ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [Sorghum bicolor]
            gi|241946122|gb|EES19267.1| hypothetical protein
            SORBIDRAFT_09g008040 [Sorghum bicolor]
          Length = 1679

 Score =  216 bits (549), Expect = 5e-54
 Identities = 112/245 (45%), Positives = 155/245 (63%)
 Frame = +2

Query: 14   CLVEASRVKMPSALRSLFVTLLVYCQPTGVRRLWDEFVMVMAEDYASSNTTRVEVLHNQV 193
            CL EA+  +MP ALR LF T+LV+ + T +R LW++    + EDY+  N+    ++   V
Sbjct: 1103 CLTEATTFQMPCALRRLFATILVFGEATNIRGLWEKHKEALGEDYSRDNSNP-SIVEQMV 1161

Query: 194  LSDISKLLVLQNRVISDYDLPPVNKXXXXXXXXXXXXXXXXXVVVPHEDLLSIDCLNKEQ 373
            L DI  +L    + I DY LPP+ +                 V V  E L   + LNKEQ
Sbjct: 1162 LRDIRDMLHSMGKNIRDYGLPPICEIGPTSIDMMKEVREEQNVYVEQEHLDIFNSLNKEQ 1221

Query: 374  LTAYRAILQVVEEKKNGIFFVDGPGGTGKTYLYRAILASIRKDGGIALATATSGIAATIL 553
               +  I+Q V +KK+ +FFVDGPGGTGKT+LY+A+LA +R  G IA+ATATSGIAA+IL
Sbjct: 1222 RQGFDEIIQHVFDKKSQVFFVDGPGGTGKTFLYKALLARVRSKGLIAIATATSGIAASIL 1281

Query: 554  PGGRTAHSRFKLPLSPKPNSMCLISKGTDLANLIKKASVIIWDEITMTHRYTFEALDKTF 733
            PGGRTAHSRFK+P+    N+MC  SK +  A L+++AS+IIWDE+ MT R   E LD++ 
Sbjct: 1282 PGGRTAHSRFKIPIKIGENTMCSFSKQSGTAELLRRASLIIWDEVAMTKRQCVETLDRSL 1341

Query: 734  RDLFD 748
            +D+ +
Sbjct: 1342 QDIME 1346


>gb|EEC77085.1| hypothetical protein OsI_15489 [Oryza sativa Indica Group]
          Length = 1412

 Score =  214 bits (545), Expect = 2e-53
 Identities = 111/246 (45%), Positives = 154/246 (62%)
 Frame = +2

Query: 14   CLVEASRVKMPSALRSLFVTLLVYCQPTGVRRLWDEFVMVMAEDYASSNTTRVEVLHNQV 193
            CL EA  ++MPS+LR LF T+LV+C+P+ VR LW+  +  M+EDY   N     V+   V
Sbjct: 932  CLTEAELLQMPSSLRRLFATILVFCEPSDVRVLWNNHLEAMSEDYRR-NCQCPHVVQQMV 990

Query: 194  LSDISKLLVLQNRVISDYDLPPVNKXXXXXXXXXXXXXXXXXVVVPHEDLLSIDCLNKEQ 373
            L +I  +L    + I  + LP V+                  + V  ED    + LN EQ
Sbjct: 991  LINIKDMLRSMGKDIRSFPLPGVDMLHDTTNGVPKEIIEESMIKVDPEDTALCNSLNTEQ 1050

Query: 374  LTAYRAILQVVEEKKNGIFFVDGPGGTGKTYLYRAILASIRKDGGIALATATSGIAATIL 553
              AY  IL  V+  + G+FF+DGPGGTGKT+LYRA+LA++R+ G IA+ATATSG+AA+I+
Sbjct: 1051 RAAYDEILATVDHNEGGLFFIDGPGGTGKTFLYRALLATVREQGKIAIATATSGVAASIM 1110

Query: 554  PGGRTAHSRFKLPLSPKPNSMCLISKGTDLANLIKKASVIIWDEITMTHRYTFEALDKTF 733
            PGGRTAHSRFK+PL     ++C  +K +  A L++ AS+IIWDE +MT R   EALD + 
Sbjct: 1111 PGGRTAHSRFKIPLRIDDGAICTFTKQSGTAKLLQMASLIIWDEASMTKRQAVEALDNSM 1170

Query: 734  RDLFDE 751
            RD+ D+
Sbjct: 1171 RDIMDK 1176


>emb|CAD40616.1| OSJNBb0066J23.21 [Oryza sativa Japonica Group]
            gi|38346440|emb|CAE04434.2| OSJNBa0018J19.1 [Oryza sativa
            Japonica Group] gi|116309570|emb|CAH66630.1|
            OSIGBa0105P02.4 [Oryza sativa Indica Group]
          Length = 1746

 Score =  214 bits (545), Expect = 2e-53
 Identities = 111/246 (45%), Positives = 154/246 (62%)
 Frame = +2

Query: 14   CLVEASRVKMPSALRSLFVTLLVYCQPTGVRRLWDEFVMVMAEDYASSNTTRVEVLHNQV 193
            CL EA  ++MPS+LR LF T+LV+C+P+ VR LW+  +  M+EDY   N     V+   V
Sbjct: 1266 CLTEAELLQMPSSLRRLFATILVFCEPSDVRVLWNNHLEAMSEDYRR-NCQCPHVVQQMV 1324

Query: 194  LSDISKLLVLQNRVISDYDLPPVNKXXXXXXXXXXXXXXXXXVVVPHEDLLSIDCLNKEQ 373
            L +I  +L    + I  + LP V+                  + V  ED    + LN EQ
Sbjct: 1325 LINIKDMLRSMGKDIRSFPLPGVDMLHDTTNGVPKEIIEESMIKVDPEDTALCNSLNTEQ 1384

Query: 374  LTAYRAILQVVEEKKNGIFFVDGPGGTGKTYLYRAILASIRKDGGIALATATSGIAATIL 553
              AY  IL  V+  + G+FF+DGPGGTGKT+LYRA+LA++R+ G IA+ATATSG+AA+I+
Sbjct: 1385 RAAYDEILATVDHNEGGLFFIDGPGGTGKTFLYRALLATVREQGKIAIATATSGVAASIM 1444

Query: 554  PGGRTAHSRFKLPLSPKPNSMCLISKGTDLANLIKKASVIIWDEITMTHRYTFEALDKTF 733
            PGGRTAHSRFK+PL     ++C  +K +  A L++ AS+IIWDE +MT R   EALD + 
Sbjct: 1445 PGGRTAHSRFKIPLRIDDGAICTFTKQSGTAKLLQMASLIIWDEASMTKRQAVEALDNSM 1504

Query: 734  RDLFDE 751
            RD+ D+
Sbjct: 1505 RDIMDK 1510


>ref|XP_002449443.1| hypothetical protein SORBIDRAFT_05g011880 [Sorghum bicolor]
           gi|241935286|gb|EES08431.1| hypothetical protein
           SORBIDRAFT_05g011880 [Sorghum bicolor]
          Length = 708

 Score =  213 bits (542), Expect = 4e-53
 Identities = 110/249 (44%), Positives = 153/249 (61%)
 Frame = +2

Query: 2   SYRACLVEASRVKMPSALRSLFVTLLVYCQPTGVRRLWDEFVMVMAEDYASSNTTRVEVL 181
           S   CL EA+  +MP ALR LF T+LV+C+ T +R LW +    + ED++  N     ++
Sbjct: 128 SINDCLTEATTFQMPCALRRLFATILVFCEDTDIRGLWAKHKDALGEDFSRDNDNTF-IV 186

Query: 182 HNQVLSDISKLLVLQNRVISDYDLPPVNKXXXXXXXXXXXXXXXXXVVVPHEDLLSIDCL 361
              VL DI  +L    + I DY LPP++                  + +  + L   D L
Sbjct: 187 EQMVLRDIRDMLHSMGKDIRDYGLPPISDEGPSSVDMMREVTDEQNIPIDQDHLDIFDSL 246

Query: 362 NKEQLTAYRAILQVVEEKKNGIFFVDGPGGTGKTYLYRAILASIRKDGGIALATATSGIA 541
           NKEQ   +  I+Q V   K+ +FFVDGPGGTGKT+LY+A+LA +R  G IA+ATATSGIA
Sbjct: 247 NKEQREGFDEIIQHVFANKSQVFFVDGPGGTGKTFLYKALLARVRSRGLIAIATATSGIA 306

Query: 542 ATILPGGRTAHSRFKLPLSPKPNSMCLISKGTDLANLIKKASVIIWDEITMTHRYTFEAL 721
           A+ILPGGRTAHSRFK+P+    NSMC  +K +  A L+++AS+IIWDE+ MT R   E L
Sbjct: 307 ASILPGGRTAHSRFKIPIKIGDNSMCSFTKQSGTAELLRRASLIIWDEVAMTKRQCVETL 366

Query: 722 DKTFRDLFD 748
           D++ +D+ +
Sbjct: 367 DRSLQDIME 375


>ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [Sorghum bicolor]
            gi|241946187|gb|EES19332.1| hypothetical protein
            SORBIDRAFT_09g016160 [Sorghum bicolor]
          Length = 1379

 Score =  212 bits (540), Expect = 6e-53
 Identities = 113/243 (46%), Positives = 154/243 (63%)
 Frame = +2

Query: 14   CLVEASRVKMPSALRSLFVTLLVYCQPTGVRRLWDEFVMVMAEDYASSNTTRVEVLHNQV 193
            CLVEA+  +MP ALR LF T+LV+C+ T +  LW++    MAEDY S N    E++   V
Sbjct: 803  CLVEAATFQMPYALRRLFATVLVHCEATRICALWEKHKESMAEDY-SRNQCNSELVEQMV 861

Query: 194  LSDISKLLVLQNRVISDYDLPPVNKXXXXXXXXXXXXXXXXXVVVPHEDLLSIDCLNKEQ 373
            L DI  LL    + I ++DLP ++                  V V  E L     LN+EQ
Sbjct: 862  LRDIRDLLQSMGKDIKNFDLPELSDAADYSNDKMRLVREELSVGVDPEHLQIKGSLNREQ 921

Query: 374  LTAYRAILQVVEEKKNGIFFVDGPGGTGKTYLYRAILASIRKDGGIALATATSGIAATIL 553
            L  +  I+  V  KK+ +FFVDGPGGTGKT+LY+A+LA++R  G IA+ATATSGIAA+IL
Sbjct: 922  LAGFHEIMNHVLNKKSQVFFVDGPGGTGKTFLYKALLAAVRSKGLIAIATATSGIAASIL 981

Query: 554  PGGRTAHSRFKLPLSPKPNSMCLISKGTDLANLIKKASVIIWDEITMTHRYTFEALDKTF 733
            PGGRTAHSRFK+P+    NS C  S   + A L+++AS++IWDE+ MT+R   E LD++ 
Sbjct: 982  PGGRTAHSRFKIPIKISSNSTCTFSIQDETAELLRRASLLIWDEVAMTNRLAVECLDRSL 1041

Query: 734  RDL 742
            +D+
Sbjct: 1042 QDV 1044


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