BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017730
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [...   231   2e-58
ref|XP_002269842.1| PREDICTED: WD repeat-containing protein 55 [...   228   1e-57
ref|XP_002305841.1| predicted protein [Populus trichocarpa] gi|2...   228   1e-57
ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula] g...   224   1e-56
ref|XP_003535974.1| PREDICTED: WD repeat-containing protein 55-l...   224   2e-56

>ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [Vitis vinifera]
           gi|297743547|emb|CBI36414.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  231 bits (588), Expect = 2e-58
 Identities = 119/179 (66%), Positives = 136/179 (75%)
 Frame = +1

Query: 1   SEDEPLSIVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRV 180
           SEDE LS+V+MKNGRKVICGTQ+G LLLYSWG+FKDCSDRF     NS+D LLKLDEDRV
Sbjct: 177 SEDELLSVVIMKNGRKVICGTQSGALLLYSWGHFKDCSDRFIDLSPNSVDALLKLDEDRV 236

Query: 181 ITGTENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLKLWDLDDL 360
           ITG+ENGLISL+GILPNRIIQPIAEHSEYPVERLA+S DRK+LGSISHDQMLKLWDLDDL
Sbjct: 237 ITGSENGLISLVGILPNRIIQPIAEHSEYPVERLAFSFDRKYLGSISHDQMLKLWDLDDL 296

Query: 361 LQGSSDVPRSQSAVAXXXXXXXXXXXXTNPXXXXXXXXXXXXXXXQRALDASNNFFADL 537
           LQGS    RSQ A+A            ++                 +AL++S++FFADL
Sbjct: 297 LQGSGSTLRSQEAMA---------DSDSDEMDVDAKETKRKTASNGQALNSSSSFFADL 346


>ref|XP_002269842.1| PREDICTED: WD repeat-containing protein 55 [Vitis vinifera]
           gi|298205166|emb|CBI17225.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  228 bits (580), Expect = 1e-57
 Identities = 118/179 (65%), Positives = 135/179 (75%)
 Frame = +1

Query: 1   SEDEPLSIVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRV 180
           SEDE LS+VLMKNGRKVICGTQ+G LLLYSWG+FKDCSDRF     NS+D LLKLDED V
Sbjct: 177 SEDELLSVVLMKNGRKVICGTQSGALLLYSWGHFKDCSDRFIDLSPNSVDALLKLDEDSV 236

Query: 181 ITGTENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLKLWDLDDL 360
           ITG+ENGLISL+GILPNRIIQPIAEHSEYPVERLA+S DRK+LGSISHDQMLKLWDLDDL
Sbjct: 237 ITGSENGLISLVGILPNRIIQPIAEHSEYPVERLAFSFDRKYLGSISHDQMLKLWDLDDL 296

Query: 361 LQGSSDVPRSQSAVAXXXXXXXXXXXXTNPXXXXXXXXXXXXXXXQRALDASNNFFADL 537
           LQGS    RS+ A+A            ++                 +AL++S++FFADL
Sbjct: 297 LQGSGSTLRSREAMA---------DSDSDEMDVDAKETKRKTASNGQALNSSSSFFADL 346


>ref|XP_002305841.1| predicted protein [Populus trichocarpa] gi|222848805|gb|EEE86352.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  228 bits (580), Expect = 1e-57
 Identities = 107/135 (79%), Positives = 122/135 (90%)
 Frame = +1

Query: 1   SEDEPLSIVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRV 180
           SE+E LS+V+MKNGRKVICG+QNG LLLYSWG+FKDCSDRFTG   NSID LLKLDEDRV
Sbjct: 176 SEEELLSVVIMKNGRKVICGSQNGTLLLYSWGFFKDCSDRFTGLSPNSIDALLKLDEDRV 235

Query: 181 ITGTENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLKLWDLDDL 360
           ITG+ENGLISL+GILPNRIIQP+AEHSEYP+E LA+SHDRKFLGSISHDQ+LK+WDLDDL
Sbjct: 236 ITGSENGLISLLGILPNRIIQPLAEHSEYPIEHLAFSHDRKFLGSISHDQVLKMWDLDDL 295

Query: 361 LQGSSDVPRSQSAVA 405
           LQ S +    Q+AV+
Sbjct: 296 LQNSVNAQNDQAAVS 310


>ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula]
           gi|355510141|gb|AES91283.1| WD-40 repeat protein
           [Medicago truncatula]
          Length = 420

 Score =  224 bits (572), Expect = 1e-56
 Identities = 113/181 (62%), Positives = 131/181 (72%), Gaps = 2/181 (1%)
 Frame = +1

Query: 1   SEDEPLSIVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRV 180
           SEDE LS+VLMKNGRKV+CG+Q G+LLLYSWG FKDCSDRF    SNSID +LKLDEDR+
Sbjct: 240 SEDELLSVVLMKNGRKVVCGSQTGILLLYSWGCFKDCSDRFVDLASNSIDTMLKLDEDRI 299

Query: 181 ITGTENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLKLWDLDDL 360
           ITG+ENG+I+L+GILPNRII+PIAEHSEYPVERLA+SHDRKFLGSI HDQMLKLWDLD++
Sbjct: 300 ITGSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLDNI 359

Query: 361 LQGSSDVPRSQSAVA--XXXXXXXXXXXXTNPXXXXXXXXXXXXXXXQRALDASNNFFAD 534
           LQGS    R+++ V                N                  A+  SNNFFAD
Sbjct: 360 LQGSRSTQRNETGVVANDGDSDDGDEMDVDNSASKFSKGNKRKNASNGHAVGDSNNFFAD 419

Query: 535 L 537
           L
Sbjct: 420 L 420


>ref|XP_003535974.1| PREDICTED: WD repeat-containing protein 55-like [Glycine max]
          Length = 352

 Score =  224 bits (570), Expect = 2e-56
 Identities = 112/179 (62%), Positives = 133/179 (74%)
 Frame = +1

Query: 1   SEDEPLSIVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRV 180
           SEDE LS+VLMKNGRKV+CG+Q GV+LLYSWG FKDCSDRFT   SNSID +LKLDEDR+
Sbjct: 176 SEDELLSVVLMKNGRKVVCGSQTGVILLYSWGCFKDCSDRFTDLSSNSIDAMLKLDEDRI 235

Query: 181 ITGTENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLKLWDLDDL 360
           ITG+ENG+I+L+GILPNR+IQPIAEHSEYPVE LA+SHD+KFLGSI+HDQMLKLWDLD++
Sbjct: 236 ITGSENGIINLVGILPNRVIQPIAEHSEYPVECLAFSHDKKFLGSIAHDQMLKLWDLDNI 295

Query: 361 LQGSSDVPRSQSAVAXXXXXXXXXXXXTNPXXXXXXXXXXXXXXXQRALDASNNFFADL 537
           LQGS +  R+++  A             +                  AL  SNNFFADL
Sbjct: 296 LQGSGNTQRNEAGGA--VDSDDDEMDLDDDPSKINKGNKRKNANNGNALGGSNNFFADL 352