BLASTX nr result

ID: Coptis24_contig00017724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017724
         (1210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34887.3| unnamed protein product [Vitis vinifera]              542   e-152
ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245...   531   e-148
emb|CAN83549.1| hypothetical protein VITISV_001171 [Vitis vinifera]   524   e-146
ref|XP_004142851.1| PREDICTED: probable ATP-dependent DNA helica...   508   e-141
ref|XP_003548572.1| PREDICTED: probable ATP-dependent DNA helica...   496   e-138

>emb|CBI34887.3| unnamed protein product [Vitis vinifera]
          Length = 1270

 Score =  542 bits (1396), Expect = e-152
 Identities = 275/380 (72%), Positives = 321/380 (84%), Gaps = 2/380 (0%)
 Frame = +3

Query: 3    MTKYYLKFDTMKHIMETPESCSLEDALNIICCSEEIAWIQLRRNEKKLLNDINNDKEGRL 182
            MTKYYLKF TMKHIM+TP +CSLEDAL+IIC SEEIAWIQLRRNEKK LNDIN DK+G+L
Sbjct: 539  MTKYYLKFGTMKHIMQTPLNCSLEDALHIICRSEEIAWIQLRRNEKKFLNDINMDKDGQL 598

Query: 183  RFHILTENGKRKKRIQTREEKIFVLANDCLTGDPLCHDLSFSQDMSSICSNGCRIAKCMK 362
            RFHIL + GKRK+RIQTREEKIFVLANDCLTG+P  HDLS +QD ++ICSNGCRIAKCMK
Sbjct: 599  RFHILGDKGKRKRRIQTREEKIFVLANDCLTGNPSVHDLSLTQDANAICSNGCRIAKCMK 658

Query: 363  EYFIHKKNYKGFLSSTILSKCLYQRIWDDSPYLLKQLTGIGMVTAKALQSAGVNSFESLA 542
            EYFI+KK+YKG L+S +LSKCL Q++WDDSPYLLKQL GIGMVTAKAL S G+ SFE+LA
Sbjct: 659  EYFIYKKSYKGALNSILLSKCLLQKLWDDSPYLLKQLPGIGMVTAKALHSMGIVSFEALA 718

Query: 543  EADPRRIEILTGRKYPFGNHIKESLLSLPPKVEMKVKEIECCRQGKSKIVITLTRISQSV 722
            EADPRRIEI+TGRKYPFGNHIKESL SLPPKVE+K++EIEC RQGKSKIV+ LTR+SQS 
Sbjct: 719  EADPRRIEIVTGRKYPFGNHIKESLSSLPPKVELKIEEIECQRQGKSKIVLILTRLSQSF 778

Query: 723  SSAKHQFADMVIGSEEDNLILFHEKI-RVNEFSSPYSTEVLVSAPQQGKLTVKADLIFEE 899
             S K  +ADMV+G EEDNLILFHEKI RV+EFSSPYST +L+S PQQGKLTVKADLIFEE
Sbjct: 779  QSIKRYYADMVVGLEEDNLILFHEKISRVDEFSSPYSTTILLSTPQQGKLTVKADLIFEE 838

Query: 900  HIGLDLHEKLFMERATDAKM-NQRRSNLKSSFTHDLPKEIYVLEDDNMNSTSETMTEEHR 1076
            +IG+DLH+KL + +  ++ M + R S   SSF   LPKE+YV+EDDN    S + ++   
Sbjct: 839  YIGIDLHQKLLVVKEINSNMIHARGSKQLSSF--PLPKEVYVIEDDN-EDASHSSSKGLD 895

Query: 1077 ASNKSKMETSSMPSFNLLDE 1136
             S KSK E  S+P+F L+DE
Sbjct: 896  ISKKSKREMDSLPNFKLIDE 915


>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score =  531 bits (1367), Expect = e-148
 Identities = 271/385 (70%), Positives = 318/385 (82%), Gaps = 1/385 (0%)
 Frame = +3

Query: 3    MTKYYLKFDTMKHIMETPESCSLEDALNIICCSEEIAWIQLRRNEKKLLNDINNDKEGRL 182
            MTKYYLKF TMKHIM+TP +CSLEDAL+IIC SEEIAWIQLRRNEKK LNDIN DK+G+L
Sbjct: 1292 MTKYYLKFGTMKHIMQTPLNCSLEDALHIICRSEEIAWIQLRRNEKKFLNDINMDKDGQL 1351

Query: 183  RFHILTENGKRKKRIQTREEKIFVLANDCLTGDPLCHDLSFSQDMSSICSNGCRIAKCMK 362
            RFHIL + GKRK+RIQTREEKIFVLANDCLTG+P  HDLS +QD ++ICSNGCRIAKCMK
Sbjct: 1352 RFHILGDKGKRKRRIQTREEKIFVLANDCLTGNPSVHDLSLTQDANAICSNGCRIAKCMK 1411

Query: 363  EYFIHKKNYKGFLSSTILSKCLYQRIWDDSPYLLKQLTGIGMVTAKALQSAGVNSFESLA 542
            EYFI+KK+YKG L+S +LSKCL Q++WDDSPYLLKQL GIGMVTAKAL S G+ SFE+LA
Sbjct: 1412 EYFIYKKSYKGALNSILLSKCLLQKLWDDSPYLLKQLPGIGMVTAKALHSMGIVSFEALA 1471

Query: 543  EADPRRIEILTGRKYPFGNHIKESLLSLPPKVEMKVKEIECCRQGKSKIVITLTRISQSV 722
            EADPRRIEI+TGRKYPFGNHIKESL SLPPKVE+K++EIEC RQGKSKIV+ LTR+SQS 
Sbjct: 1472 EADPRRIEIVTGRKYPFGNHIKESLSSLPPKVELKIEEIECQRQGKSKIVLILTRLSQSF 1531

Query: 723  SSAKHQFADMVIGSEEDNLILFHEKIRVNEFSSPYSTEVLVSAPQQGKLTVKADLIFEEH 902
             S K  +ADMV+G EEDNLILFHEKI      SPYST +L+S PQQGKLTVKADLIFEE+
Sbjct: 1532 QSIKRYYADMVVGLEEDNLILFHEKI------SPYSTTILLSTPQQGKLTVKADLIFEEY 1585

Query: 903  IGLDLHEKLFMERATDAKM-NQRRSNLKSSFTHDLPKEIYVLEDDNMNSTSETMTEEHRA 1079
            IG+DLH+KL + +  ++ M + R S   SSF   LPKE+YV+EDDN    S + ++    
Sbjct: 1586 IGIDLHQKLLVVKEINSNMIHARGSKQLSSF--PLPKEVYVIEDDN-EDASHSSSKGLDI 1642

Query: 1080 SNKSKMETSSMPSFNLLDEGN*PGT 1154
            S KSK E  S+P+F L+DE +  G+
Sbjct: 1643 SKKSKREMDSLPNFKLIDEESEEGS 1667


>emb|CAN83549.1| hypothetical protein VITISV_001171 [Vitis vinifera]
          Length = 1131

 Score =  524 bits (1349), Expect = e-146
 Identities = 270/383 (70%), Positives = 313/383 (81%), Gaps = 5/383 (1%)
 Frame = +3

Query: 3    MTKYYLKFDTMKHIMETPESCSLEDALNIICCSEEIAWIQLRRNEKKLLNDINNDKEGRL 182
            MTKYYLKF TMKHIM+TP +CSLEDAL+IIC SEEIAWIQLRRNEKK LNDIN DK+G L
Sbjct: 434  MTKYYLKFGTMKHIMQTPLNCSLEDALHIICRSEEIAWIQLRRNEKKFLNDINMDKDGXL 493

Query: 183  RFHILTENGKRKKRIQTREEKIFVLANDCLTGDPLCHDLSFSQDMSSICSNGCRIAKCMK 362
            RFHIL + GKRK+RIQTREEKIFVLANDCLTG+P  HDLS +QD ++ICSNGCRIAKCMK
Sbjct: 494  RFHILGDKGKRKRRIQTREEKIFVLANDCLTGBPSVHDLSLTQDANAICSNGCRIAKCMK 553

Query: 363  EYFIHKKNYKGFLSSTILSKCLYQRIWDDSPYLLKQLTGIGMVTAK----ALQSAGVNSF 530
            EYFI+KK+YKG L+S +LSKCL Q++WDDSPYLLKQL GIGMVTAK    AL S G+ SF
Sbjct: 554  EYFIYKKSYKGALNSILLSKCLLQKLWDDSPYLLKQLPGIGMVTAKHIPQALHSMGIVSF 613

Query: 531  ESLAEADPRRIEILTGRKYPFGNHIKESLLSLPPKVEMKVKEIECCRQGKSKIVITLTRI 710
            E+LAEADPRRIEI+TGRKYPFGNHIKESL SLPPKVE+K++EIEC RQGKSKIV+ LTR+
Sbjct: 614  EALAEADPRRIEIVTGRKYPFGNHIKESLSSLPPKVELKIEEIECQRQGKSKIVLILTRL 673

Query: 711  SQSVSSAKHQFADMVIGSEEDNLILFHEKIRVNEFSSPYSTEVLVSAPQQGKLTVKADLI 890
            SQS  S K  +ADMV+G EEDNLILFHEKI      SPYST +L+S PQQGKLTVKADLI
Sbjct: 674  SQSFQSIKRYYADMVVGLEEDNLILFHEKI------SPYSTTILLSTPQQGKLTVKADLI 727

Query: 891  FEEHIGLDLHEKLFMERATDAKM-NQRRSNLKSSFTHDLPKEIYVLEDDNMNSTSETMTE 1067
            FEE+IG+DLH+KL + +  ++ M + R S   SSF   LPKE+YV+EDDN    S   ++
Sbjct: 728  FEEYIGIDLHQKLLVVKEINSNMIHXRGSKQLSSF--PLPKEVYVIEDDN-EDXSHXSSK 784

Query: 1068 EHRASNKSKMETSSMPSFNLLDE 1136
                S KSK E  S+P+F L+DE
Sbjct: 785  GLDISKKSKREMDSLPNFKLIDE 807


>ref|XP_004142851.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Cucumis
            sativus] gi|449483903|ref|XP_004156727.1| PREDICTED:
            probable ATP-dependent DNA helicase HFM1-like [Cucumis
            sativus]
          Length = 1189

 Score =  508 bits (1308), Expect = e-141
 Identities = 252/378 (66%), Positives = 304/378 (80%)
 Frame = +3

Query: 3    MTKYYLKFDTMKHIMETPESCSLEDALNIICCSEEIAWIQLRRNEKKLLNDINNDKEGRL 182
            MTKYYLKFDTMKHIM  PE+CSLE+AL IIC +EEI+WIQLRRNEKKLLND+NNDK+GRL
Sbjct: 616  MTKYYLKFDTMKHIMHAPENCSLEEALRIICHAEEISWIQLRRNEKKLLNDVNNDKDGRL 675

Query: 183  RFHILTENGKRKKRIQTREEKIFVLANDCLTGDPLCHDLSFSQDMSSICSNGCRIAKCMK 362
            RFHIL E GK+KKRIQTREEKIF+LANDCLTGDPL HDLS SQDM+SICSNGCRIAKCMK
Sbjct: 676  RFHILGEKGKKKKRIQTREEKIFILANDCLTGDPLIHDLSLSQDMNSICSNGCRIAKCMK 735

Query: 363  EYFIHKKNYKGFLSSTILSKCLYQRIWDDSPYLLKQLTGIGMVTAKALQSAGVNSFESLA 542
            EYF+++KNYKG  +S +L+K LYQ++WDDSP+LLKQL GIGMVTAKAL S G+ SFE+LA
Sbjct: 736  EYFVYRKNYKGTYNSMLLAKSLYQKLWDDSPFLLKQLPGIGMVTAKALHSMGIESFEALA 795

Query: 543  EADPRRIEILTGRKYPFGNHIKESLLSLPPKVEMKVKEIECCRQGKSKIVITLTRISQSV 722
            EADPR+IEI+TGRKYPFGNHIKESL SLPPKV++K++E EC +QGK+K+++TLTR+ QS 
Sbjct: 796  EADPRKIEIVTGRKYPFGNHIKESLSSLPPKVDLKLEEAECPKQGKAKLIVTLTRLPQSY 855

Query: 723  SSAKHQFADMVIGSEEDNLILFHEKIRVNEFSSPYSTEVLVSAPQQGKLTVKADLIFEEH 902
               K  +A+M++GSEEDN ILFHEKI      SPYST  L+S PQQGKLT+KADLIF+E+
Sbjct: 856  RPNKRHYAEMIVGSEEDNQILFHEKI------SPYSTVALISHPQQGKLTIKADLIFDEY 909

Query: 903  IGLDLHEKLFMERATDAKMNQRRSNLKSSFTHDLPKEIYVLEDDNMNSTSETMTEEHRAS 1082
            IG+DLH KL   +  +  +N R    K   +   P+E+ V++DD+     +  T+E   S
Sbjct: 910  IGIDLHRKL---QLMEQNLNVRNKWGKMPPSSHPPEEVCVIDDDS-EPPPQAATDELPIS 965

Query: 1083 NKSKMETSSMPSFNLLDE 1136
                    SMPSFNLLDE
Sbjct: 966  GDLNPLLDSMPSFNLLDE 983


>ref|XP_003548572.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Glycine
            max]
          Length = 1195

 Score =  496 bits (1277), Expect = e-138
 Identities = 247/378 (65%), Positives = 307/378 (81%)
 Frame = +3

Query: 3    MTKYYLKFDTMKHIMETPESCSLEDALNIICCSEEIAWIQLRRNEKKLLNDINNDKEGRL 182
            MTKYYL+FDTMK IM TPE+CSLEDAL+++CC+EEIAWIQLRRNEKKLLN+IN DK+GRL
Sbjct: 541  MTKYYLRFDTMKQIMRTPENCSLEDALHVVCCAEEIAWIQLRRNEKKLLNEINADKDGRL 600

Query: 183  RFHILTENGKRKKRIQTREEKIFVLANDCLTGDPLCHDLSFSQDMSSICSNGCRIAKCMK 362
            RFHIL +  K+KKRIQTREEKIF+LANDCLTGDP  HDLS  QDM+SICSNGCRIAKC+K
Sbjct: 601  RFHILGDKRKKKKRIQTREEKIFILANDCLTGDPSVHDLSLIQDMNSICSNGCRIAKCLK 660

Query: 363  EYFIHKKNYKGFLSSTILSKCLYQRIWDDSPYLLKQLTGIGMVTAKALQSAGVNSFESLA 542
            +YF++K+NYKG ++S +L+K L Q++WDDSPYLLKQL GIGMVTAKAL S GV SFE LA
Sbjct: 661  DYFVYKRNYKGTVNSALLAKSLGQKLWDDSPYLLKQLPGIGMVTAKALHSMGVRSFEELA 720

Query: 543  EADPRRIEILTGRKYPFGNHIKESLLSLPPKVEMKVKEIECCRQGKSKIVITLTRISQSV 722
            +ADPRRIE++TGRKYPFGNHIK+SLLSLPPKV++ + EIE   QG SK+V+TL RISQS 
Sbjct: 721  DADPRRIELVTGRKYPFGNHIKDSLLSLPPKVDVTLAEIESHIQGNSKLVVTLARISQSG 780

Query: 723  SSAKHQFADMVIGSEEDNLILFHEKIRVNEFSSPYSTEVLVSAPQQGKLTVKADLIFEEH 902
             S K  +ADM++GSEEDN ILFHEKIRV++FSSPYS  + V    QGK T+K D IFEE+
Sbjct: 781  QSVKRHYADMIVGSEEDNTILFHEKIRVDQFSSPYSATIFVPI-AQGKQTIKVDFIFEEY 839

Query: 903  IGLDLHEKLFMERATDAKMNQRRSNLKSSFTHDLPKEIYVLEDDNMNSTSETMTEEHRAS 1082
            IG+D+H+KL   R +++ +  +R+  ++S     P+EIYV+EDDN+ +     T+E    
Sbjct: 840  IGIDVHQKLSFTRESNSIVLLKRNKKQASCPP--PEEIYVIEDDNI-TVPRLPTKELCKL 896

Query: 1083 NKSKMETSSMPSFNLLDE 1136
            N+ +    S+PSF+LLDE
Sbjct: 897  NEDR---DSIPSFDLLDE 911


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