BLASTX nr result

ID: Coptis24_contig00017723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017723
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABQ42622.1| snakin-1 [Solanum chacoense]                           125   3e-27
gb|ABQ42623.1| snakin-1 [Solanum chacoense] gi|146742174|gb|ABQ4...   125   3e-27
sp|Q948Z4.1|SNAK1_SOLTU RecName: Full=Snakin-1; Flags: Precursor...   125   3e-27
gb|AGE15502.1| GA-stimulated transcript-like protein 6 [Gossypiu...   124   1e-26
gb|ABQ42621.1| snakin-1 [Solanum bulbocastanum]                       123   2e-26

>gb|ABQ42622.1| snakin-1 [Solanum chacoense]
          Length = 88

 Score =  125 bits (315), Expect = 3e-27
 Identities = 50/59 (84%), Positives = 55/59 (93%)
 Frame = -3

Query: 210 CDSKCKERCAKAGVMDRCLKYCGVCCQECKCVPSGTYGHKDECPCYRDKKNSKGNSKCP 34
           CDSKCK RC+KAG+ DRCLKYCG+CC+ECKCVPSGTYG+K ECPCYRDKKNSKG SKCP
Sbjct: 30  CDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88


>gb|ABQ42623.1| snakin-1 [Solanum chacoense] gi|146742174|gb|ABQ42624.1| snakin-1
           [Solanum tuberosum] gi|146742176|gb|ABQ42625.1| snakin-1
           [Solanum commersonii] gi|207091401|gb|ACI23371.1|
           snakin-1 [Solanum tuberosum] gi|207091403|gb|ACI23372.1|
           snakin-1 [Solanum tuberosum] gi|207091405|gb|ACI23373.1|
           snakin-1 [Solanum tuberosum] gi|207091407|gb|ACI23374.1|
           snakin-1 [Solanum tuberosum] gi|220067265|gb|ACL79835.1|
           Snakin-1 [Solanum tuberosum] gi|268373738|gb|ACZ04322.1|
           snakin-1 [Solanum tuberosum]
          Length = 88

 Score =  125 bits (315), Expect = 3e-27
 Identities = 50/59 (84%), Positives = 55/59 (93%)
 Frame = -3

Query: 210 CDSKCKERCAKAGVMDRCLKYCGVCCQECKCVPSGTYGHKDECPCYRDKKNSKGNSKCP 34
           CDSKCK RC+KAG+ DRCLKYCG+CC+ECKCVPSGTYG+K ECPCYRDKKNSKG SKCP
Sbjct: 30  CDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88


>sp|Q948Z4.1|SNAK1_SOLTU RecName: Full=Snakin-1; Flags: Precursor
           gi|14627134|emb|CAC44032.1| snakin-1 [Solanum tuberosum]
          Length = 88

 Score =  125 bits (315), Expect = 3e-27
 Identities = 50/59 (84%), Positives = 55/59 (93%)
 Frame = -3

Query: 210 CDSKCKERCAKAGVMDRCLKYCGVCCQECKCVPSGTYGHKDECPCYRDKKNSKGNSKCP 34
           CDSKCK RC+KAG+ DRCLKYCG+CC+ECKCVPSGTYG+K ECPCYRDKKNSKG SKCP
Sbjct: 30  CDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88


>gb|AGE15502.1| GA-stimulated transcript-like protein 6 [Gossypium hirsutum]
          Length = 88

 Score =  124 bits (310), Expect = 1e-26
 Identities = 51/65 (78%), Positives = 57/65 (87%)
 Frame = -3

Query: 228 AVSDYPCDSKCKERCAKAGVMDRCLKYCGVCCQECKCVPSGTYGHKDECPCYRDKKNSKG 49
           A SD+ CDSKC  RC+KAGV DRCLKYCG+CC++C CVPSGT+GHKDECPCYRD KNSKG
Sbjct: 25  AGSDF-CDSKCAVRCSKAGVQDRCLKYCGICCEKCHCVPSGTFGHKDECPCYRDMKNSKG 83

Query: 48  NSKCP 34
            SKCP
Sbjct: 84  KSKCP 88


>gb|ABQ42621.1| snakin-1 [Solanum bulbocastanum]
          Length = 88

 Score =  123 bits (308), Expect = 2e-26
 Identities = 49/58 (84%), Positives = 54/58 (93%)
 Frame = -3

Query: 210 CDSKCKERCAKAGVMDRCLKYCGVCCQECKCVPSGTYGHKDECPCYRDKKNSKGNSKC 37
           CDSKCK RC+KAG+ DRCLKYCG+CC+ECKCVPSGTYG+K ECPCYRDKKNSKG SKC
Sbjct: 30  CDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKC 87


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