BLASTX nr result

ID: Coptis24_contig00017715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017715
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531545.1| carbohydrate binding protein, putative [Rici...   182   2e-44
ref|XP_002888756.1| hypothetical protein ARALYDRAFT_316005 [Arab...   173   1e-41
ref|NP_177170.1| concanavalin A-like lectin protein kinase [Arab...   170   1e-40
ref|XP_002534540.1| carbohydrate binding protein, putative [Rici...   167   8e-40
ref|XP_002303928.1| predicted protein [Populus trichocarpa] gi|2...   164   1e-38

>ref|XP_002531545.1| carbohydrate binding protein, putative [Ricinus communis]
            gi|223528836|gb|EEF30839.1| carbohydrate binding protein,
            putative [Ricinus communis]
          Length = 681

 Score =  182 bits (463), Expect = 2e-44
 Identities = 96/171 (56%), Positives = 121/171 (70%), Gaps = 6/171 (3%)
 Frame = -2

Query: 560  GADPQTSRPAGTLGYIAPELARTGKASTHTDVFAFGAFLLEMACGRRPVEPRASPMDIML 381
            G DPQTS  AGT GYI PE+ ++GK++T TD++AFG F+LE+ACGR+PVEPR SP  +ML
Sbjct: 511  GNDPQTSHVAGTPGYIDPEIVQSGKSNTCTDIYAFGVFMLEVACGRKPVEPRTSPDKVML 570

Query: 380  VDLVTQCWRRGTILESVDPRLGDDYVVEEMELVLKLGLLCSQSVAPARPSMSSVVQYLGG 201
            ++ V  CW +G ILE+ D RLG++YV+ E+ELVLKLGLLCS  VA ARP+MSSVVQ L G
Sbjct: 571  IEWVMNCWEKGAILETADFRLGNEYVIHEVELVLKLGLLCSHPVAAARPTMSSVVQLLDG 630

Query: 200  EARLPDGLNADCLALGFDEGYIEVHVSHE------STPTIKFTESFHSIGR 66
             ARLPD L A   A    +   +V V+ +      S  +I FTESF S GR
Sbjct: 631  AARLPDNLFAIIRARDSGDRSSQVGVTRDFLSDKISVSSITFTESFISDGR 681


>ref|XP_002888756.1| hypothetical protein ARALYDRAFT_316005 [Arabidopsis lyrata subsp.
            lyrata] gi|297334597|gb|EFH65015.1| hypothetical protein
            ARALYDRAFT_316005 [Arabidopsis lyrata subsp. lyrata]
          Length = 660

 Score =  173 bits (439), Expect = 1e-41
 Identities = 93/170 (54%), Positives = 114/170 (67%), Gaps = 5/170 (2%)
 Frame = -2

Query: 560  GADPQTSRPAGTLGYIAPELARTGKASTHTDVFAFGAFLLEMACGRRPVEPRASPMDIML 381
            G D QTS  AGT GYI+PEL+RTGK+ST +DVFAFG F+LE+ CGRRP+EPR SP +++L
Sbjct: 491  GIDSQTSNVAGTFGYISPELSRTGKSSTSSDVFAFGVFMLEITCGRRPIEPRGSPSEMVL 550

Query: 380  VDLVTQCWRRGTILESVDPRLGDDYVVEEMELVLKLGLLCSQSVAPARPSMSSVVQYLGG 201
             D V  CW  G IL+ VD +LG  Y+ E++ LVLKLGLLCS  VA  RPSMSSV+Q+L G
Sbjct: 551  TDWVLDCWGSGDILQVVDEKLGHMYLAEQVTLVLKLGLLCSHPVAATRPSMSSVIQFLDG 610

Query: 200  EARLPDGL----NADCLALGFDE-GYIEVHVSHESTPTIKFTESFHSIGR 66
             A LP  L    NA  +  GFD  G     +   S  ++  TESF S GR
Sbjct: 611  VATLPHNLLDLANARIIDGGFDALGETTESMEASSNVSVVMTESFLSSGR 660


>ref|NP_177170.1| concanavalin A-like lectin protein kinase [Arabidopsis thaliana]
           gi|75317842|sp|O04533.1|LRK52_ARATH RecName:
           Full=Putative L-type lectin-domain containing receptor
           kinase V.2; Short=Arabidopsis thaliana lectin-receptor
           kinase b1; Short=AthlecRK-b1; Short=LecRK-V.2; Flags:
           Precursor gi|2194127|gb|AAB61102.1| Strong similarity to
           Arabidopsis receptor-like protein kinase (gb|ATLECGENE)
           and F20P5.16 [Arabidopsis thaliana]
           gi|332196902|gb|AEE35023.1| concanavalin A-like lectin
           protein kinase [Arabidopsis thaliana]
          Length = 656

 Score =  170 bits (431), Expect = 1e-40
 Identities = 91/170 (53%), Positives = 114/170 (67%), Gaps = 5/170 (2%)
 Frame = -2

Query: 560 GADPQTSRPAGTLGYIAPELARTGKASTHTDVFAFGAFLLEMACGRRPVEPRASPMDIML 381
           G D QTS  AGT GYI+PEL+RTGK+ST +DVFAFG F+LE+ CGRRP+ PR SP +++L
Sbjct: 487 GIDSQTSNVAGTFGYISPELSRTGKSSTSSDVFAFGVFMLEITCGRRPIGPRGSPSEMVL 546

Query: 380 VDLVTQCWRRGTILESVDPRLGDDYVVEEMELVLKLGLLCSQSVAPARPSMSSVVQYLGG 201
            D V  CW  G IL+ VD +LG  Y+ E++ LVLKLGLLCS  VA  RPSMSSV+Q+L G
Sbjct: 547 TDWVLDCWDSGDILQVVDEKLGHRYLAEQVTLVLKLGLLCSHPVAATRPSMSSVIQFLDG 606

Query: 200 EARLP----DGLNADCLALGFDE-GYIEVHVSHESTPTIKFTESFHSIGR 66
            A LP    D +N+  +  GFD  G     +   S  ++  TESF S GR
Sbjct: 607 VATLPHNLLDLVNSRIINEGFDTLGVTTESMEASSNVSLVMTESFLSSGR 656


>ref|XP_002534540.1| carbohydrate binding protein, putative [Ricinus communis]
           gi|223525085|gb|EEF27844.1| carbohydrate binding
           protein, putative [Ricinus communis]
          Length = 657

 Score =  167 bits (424), Expect = 8e-40
 Identities = 93/166 (56%), Positives = 113/166 (68%), Gaps = 3/166 (1%)
 Frame = -2

Query: 554 DPQTSRPAGTLGYIAPELARTGKASTHTDVFAFGAFLLEMACGRRPVEPRASPMDIMLVD 375
           DPQT+  AGT GYIAPELA+ GKA+T TDV+A+GAF LE+ACGRRPVE R SP +  LVD
Sbjct: 495 DPQTTHVAGTFGYIAPELAKNGKATTSTDVYAYGAFCLEVACGRRPVESRVSPEEANLVD 554

Query: 374 LVTQCWRRGTILESVDPRLGDDYVVEEMELVLKLGLLCSQSVAPARPSMSSVVQYLGGEA 195
            V + WR G IL +VDP+L  D+ V+E+ELVLKLGLLCS  VA  RP MS V+ YL G A
Sbjct: 555 WVYRSWREGKILNTVDPKLNKDFNVKEVELVLKLGLLCSHPVAEVRPRMSQVLLYLKGHA 614

Query: 194 RLPDGLNADCLALGFDE---GYIEVHVSHESTPTIKFTESFHSIGR 66
            LP+  N D    G D+    Y    +++ +TP    TESF S GR
Sbjct: 615 SLPE--NFDFQIPGPDQIGKSYSPAILNY-TTPPFTVTESFKSAGR 657


>ref|XP_002303928.1| predicted protein [Populus trichocarpa] gi|222841360|gb|EEE78907.1|
           predicted protein [Populus trichocarpa]
          Length = 647

 Score =  164 bits (414), Expect = 1e-38
 Identities = 90/164 (54%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
 Frame = -2

Query: 554 DPQTSRPAGTLGYIAPELARTGKASTHTDVFAFGAFLLEMACGRRPVEPRASPMDIMLVD 375
           D QT+  AGTLGYIAPELAR+GK +  TDV+AFGAF LE+ACGRRPVEP+ S  +++LVD
Sbjct: 485 DIQTTHVAGTLGYIAPELARSGKPTPSTDVYAFGAFCLEVACGRRPVEPKTSAKEMILVD 544

Query: 374 LVTQCWRRGTILESVDPRLGDDYVVEEMELVLKLGLLCSQSVAPARPSMSSVVQYLGGEA 195
            V   W  G IL + DP+L ++   EE+ELVLKLGLLCS SVA  RP MS V+ YL G+A
Sbjct: 545 WVYSFWMEGKILSATDPKLNEECKAEEVELVLKLGLLCSHSVAEGRPKMSQVLMYLKGQA 604

Query: 194 RLPDGLNADCLALGFDEGYIEVH-VSHESTPTIKFTESFHSIGR 66
            LP+ LNA   A     G  E H +   STP++  T S    GR
Sbjct: 605 LLPENLNAHVKAQE-GRGESENHAILCYSTPSLTITHSLMYTGR 647


Top