BLASTX nr result

ID: Coptis24_contig00017709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017709
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522376.1| PREDICTED: serine/threonine-protein kinase A...   108   6e-22
ref|XP_004155079.1| PREDICTED: LOW QUALITY PROTEIN: serine/threo...   105   4e-21
ref|XP_004138280.1| PREDICTED: LOW QUALITY PROTEIN: serine/threo...   105   4e-21
ref|XP_002511396.1| ataxia telangiectasia mutated, putative [Ric...   102   2e-20
ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase A...   101   6e-20

>ref|XP_003522376.1| PREDICTED: serine/threonine-protein kinase ATM-like [Glycine max]
          Length = 3439

 Score =  108 bits (269), Expect = 6e-22
 Identities = 58/114 (50%), Positives = 74/114 (64%), Gaps = 7/114 (6%)
 Frame = -1

Query: 331 SEISESKRRKPKEIYAKVFRNLIE-------SGKMPVFVSVAKILFSHVWDVLKDATVFQ 173
           +EIS SKRR PK IYAK  R +++       SGKM    SV K LF+HVWDVL +   FQ
Sbjct: 78  AEISSSKRRNPKMIYAKTLRIVVQRAEDAKCSGKMLPLSSVVKPLFNHVWDVLSNVPSFQ 137

Query: 172 FEYGKILQHLLEVKEYHVHMRKKLYCGFVLLHLGKVEASLSGTNSVQAKS*KEL 11
            EYG IL+HLL V++Y   MRK++YC  V L++ KVEASL+G N     S +E+
Sbjct: 138 SEYGIILRHLLSVRDYSFQMRKRIYCNLVFLYIEKVEASLNGKNISNCTSKEEV 191


>ref|XP_004155079.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase
           ATM-like [Cucumis sativus]
          Length = 1304

 Score =  105 bits (262), Expect = 4e-21
 Identities = 54/116 (46%), Positives = 72/116 (62%), Gaps = 7/116 (6%)
 Frame = -1

Query: 328 EISESKRRKPKEIYAKVFRNLIE-------SGKMPVFVSVAKILFSHVWDVLKDATVFQF 170
           EIS SKRR PK ++AK  R +++       SG     +SV K+LFSHVWDVL     FQ 
Sbjct: 77  EISSSKRRLPKLMFAKTLRGVVQKAEANKFSGNALPLISVVKVLFSHVWDVLSTTPCFQS 136

Query: 169 EYGKILQHLLEVKEYHVHMRKKLYCGFVLLHLGKVEASLSGTNSVQAKS*KELVNC 2
           EYG I++HL+ V++Y  H+RK++YC  +LL+L KVE SL G N       +EL  C
Sbjct: 137 EYGIIIRHLVAVRDYRFHLRKRIYCNLMLLYLEKVEGSLVGKNDNLYTPKEELFRC 192


>ref|XP_004138280.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase
           ATM-like [Cucumis sativus]
          Length = 2985

 Score =  105 bits (262), Expect = 4e-21
 Identities = 54/116 (46%), Positives = 72/116 (62%), Gaps = 7/116 (6%)
 Frame = -1

Query: 328 EISESKRRKPKEIYAKVFRNLIE-------SGKMPVFVSVAKILFSHVWDVLKDATVFQF 170
           EIS SKRR PK ++AK  R +++       SG     +SV K+LFSHVWDVL     FQ 
Sbjct: 77  EISSSKRRLPKLMFAKTLRGVVQKAEANKFSGNALPLISVVKVLFSHVWDVLSTTPCFQS 136

Query: 169 EYGKILQHLLEVKEYHVHMRKKLYCGFVLLHLGKVEASLSGTNSVQAKS*KELVNC 2
           EYG I++HL+ V++Y  H+RK++YC  +LL+L KVE SL G N       +EL  C
Sbjct: 137 EYGIIIRHLVAVRDYRFHLRKRIYCNLMLLYLEKVEGSLVGKNDNLYTPKEELFRC 192


>ref|XP_002511396.1| ataxia telangiectasia mutated, putative [Ricinus communis]
           gi|223550511|gb|EEF51998.1| ataxia telangiectasia
           mutated, putative [Ricinus communis]
          Length = 2954

 Score =  102 bits (255), Expect = 2e-20
 Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 7/116 (6%)
 Frame = -1

Query: 328 EISESKRRKPKEIYAKVFRNLIE-------SGKMPVFVSVAKILFSHVWDVLKDATVFQF 170
           EIS SKRR PK  +AK  R +++       SGK+   + VAKILFSH+WDVL   + FQ 
Sbjct: 77  EISTSKRRLPKASFAKTLRIVVQRAEDAKFSGKVLPLLPVAKILFSHIWDVLSSVSSFQS 136

Query: 169 EYGKILQHLLEVKEYHVHMRKKLYCGFVLLHLGKVEASLSGTNSVQAKS*KELVNC 2
           EYG IL+HLL V++Y  H+R ++YC  + L++ KVE SL+  N  Q    +E   C
Sbjct: 137 EYGVILRHLLAVRDYRFHLRNRVYCSLMRLYIEKVETSLADKNDNQGNLKEEAFRC 192


>ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase ATM [Vitis vinifera]
          Length = 2956

 Score =  101 bits (252), Expect = 6e-20
 Identities = 52/116 (44%), Positives = 75/116 (64%), Gaps = 7/116 (6%)
 Frame = -1

Query: 328 EISESKRRKPKEIYAKVFRNLIE-------SGKMPVFVSVAKILFSHVWDVLKDATVFQF 170
           EIS SK+R PK ++AK  R +++       SGKM   ++V K LFSH+ DVL+D   FQ 
Sbjct: 79  EISSSKKRLPKLVFAKTLRIVVQRAEDAKFSGKMLPLLTVVKPLFSHISDVLRDIPSFQS 138

Query: 169 EYGKILQHLLEVKEYHVHMRKKLYCGFVLLHLGKVEASLSGTNSVQAKS*KELVNC 2
           EYG +L+H+L V++Y  HMR ++YC  VLL++GKVE S S  ++ Q    +E+  C
Sbjct: 139 EYGIMLRHILAVRDYRFHMRNRVYCNLVLLYMGKVETSFSEKSNSQYNPKEEVFRC 194


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