BLASTX nr result

ID: Coptis24_contig00017688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017688
         (1248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|2...   127   6e-27
ref|XP_002530545.1| protein binding protein, putative [Ricinus c...   117   8e-24
ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261...   113   1e-22
ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-22
dbj|BAF80453.1| DC1 domain containing protein [Nicotiana tabacum]     110   6e-22

>ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|222858396|gb|EEE95943.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  127 bits (319), Expect = 6e-27
 Identities = 63/153 (41%), Positives = 81/153 (52%)
 Frame = -2

Query: 461 MGKLEYDQSIQHFSHEHPLELSKIQELPQNYPSTCSGCNLSSSDWIYTCKACKYVLHIPC 282
           MGKL +D  I HFSH HPLELS  Q L   Y ++CS CNL  S W+Y+CK C + LHI C
Sbjct: 1   MGKLNHDPYINHFSHPHPLELSNAQSL---YMNSCSACNLQPSGWMYSCKPCNFTLHISC 57

Query: 281 TQVPQVIHHPADPKHALILQAPPSHLQALLPTH*LQQSLLPYLERPSYLERVLTICDACW 102
           TQ+P +I HP  P H L L + P +                              CD C 
Sbjct: 58  TQMPTLITHPCHPIHPLTLFSTPVYPGGSFN------------------------CDGCG 93

Query: 101 EHVKGFYYYCNSCDLDLYILCASMPPSVKHQSH 3
               GF Y+C +CD D++++CA+ P S+ HQSH
Sbjct: 94  LQGNGFNYHCTTCDFDVHMMCATNPLSLAHQSH 126


>ref|XP_002530545.1| protein binding protein, putative [Ricinus communis]
           gi|223529907|gb|EEF31836.1| protein binding protein,
           putative [Ricinus communis]
          Length = 324

 Score =  117 bits (292), Expect = 8e-24
 Identities = 61/154 (39%), Positives = 79/154 (51%), Gaps = 1/154 (0%)
 Frame = -2

Query: 461 MGKLEYDQSIQHFSHEHPLELSKIQELPQNYPST-CSGCNLSSSDWIYTCKACKYVLHIP 285
           MG+L +D  I HFSH HPL LS +Q    +YP T CS C L SS W+Y+C  C + LH+ 
Sbjct: 1   MGRLSHDPCIHHFSHPHPLHLSNLQS---SYPITHCSACQLESSGWMYSCNPCNFTLHLS 57

Query: 284 CTQVPQVIHHPADPKHALILQAPPSHLQALLPTH*LQQSLLPYLERPSYLERVLTICDAC 105
           C+Q+P +I HP+ P H L L                       L  P Y   V + CDAC
Sbjct: 58  CSQLPSLITHPSHPNHTLDL-----------------------LPSPIYPNGVFS-CDAC 93

Query: 104 WEHVKGFYYYCNSCDLDLYILCASMPPSVKHQSH 3
                GF Y+CN C  D++  CA  P S+ +Q H
Sbjct: 94  GHGGLGFGYHCNHCSFDIHTTCAQNPLSLTNQFH 127


>ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261320 [Vitis vinifera]
          Length = 360

 Score =  113 bits (282), Expect = 1e-22
 Identities = 62/144 (43%), Positives = 76/144 (52%)
 Frame = -2

Query: 434 IQHFSHEHPLELSKIQELPQNYPSTCSGCNLSSSDWIYTCKACKYVLHIPCTQVPQVIHH 255
           I HFSH HPL+LS          ++CSGC L +S  IY CK C Y LHI C+Q+PQ I H
Sbjct: 12  IHHFSHSHPLQLSNHHPQQTLTLASCSGCKLKASGLIYDCKRCNYFLHISCSQMPQQITH 71

Query: 254 PADPKHALILQAPPSHLQALLPTH*LQQSLLPYLERPSYLERVLTICDACWEHVKGFYYY 75
                HAL                    SLLP    P+Y E +   CDAC +   GF Y+
Sbjct: 72  SFHKAHAL--------------------SLLP---NPAYPEGLFN-CDACGKQGNGFSYH 107

Query: 74  CNSCDLDLYILCASMPPSVKHQSH 3
           C  C++DL+ILCAS P  + HQSH
Sbjct: 108 CGVCNIDLHILCASKPLFLNHQSH 131


>ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|222872676|gb|EEF09807.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  113 bits (282), Expect = 1e-22
 Identities = 58/155 (37%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
 Frame = -2

Query: 461 MGKL--EYDQSIQHFSHEHPLELSKIQELPQNYPSTCSGCNLSSSDWIYTCKACKYVLHI 288
           MG+L  + + +IQHFSH HPL+LS  Q       ++CSGC L  S WIY C  C Y LH+
Sbjct: 1   MGRLPAQTEAAIQHFSHPHPLQLSNYQPQQTLCLASCSGCKLKISGWIYACTQCNYFLHV 60

Query: 287 PCTQVPQVIHHPADPKHALILQAPPSHLQALLPTH*LQQSLLPYLERPSYLERVLTICDA 108
            C+Q+PQ I HP    H L L + P +   L                          CDA
Sbjct: 61  SCSQMPQQITHPYHQNHVLSLLSTPMYPGDLFN------------------------CDA 96

Query: 107 CWEHVKGFYYYCNSCDLDLYILCASMPPSVKHQSH 3
           C +   GF Y+C +C++ ++  CA+MP  + HQSH
Sbjct: 97  CGKQGNGFSYHCGTCNIYIHTTCAAMPLVLTHQSH 131


>dbj|BAF80453.1| DC1 domain containing protein [Nicotiana tabacum]
          Length = 212

 Score =  110 bits (276), Expect = 6e-22
 Identities = 60/158 (37%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
 Frame = -2

Query: 461 MGKLEYD-----QSIQHFSHEHPLELSKIQELPQNYPSTCSGCNLSSSDWIYTCKACKYV 297
           MGK++ +      +I HFSH HPLEL   Q    +    CSGC + +   IYTCK+C + 
Sbjct: 1   MGKVKLEPQESKNTINHFSHPHPLELITNQNFASSSSQLCSGCKIQAIGSIYTCKSCNFF 60

Query: 296 LHIPCTQVPQVIHHPADPKHALILQAPPSHLQALLPTH*LQQSLLPYLERPSYLERVLTI 117
           LH  C+Q+PQ I HP D +H   L                       L +P Y +     
Sbjct: 61  LHTECSQMPQQITHPFDKEHHFTL-----------------------LPKPIYPDGKFN- 96

Query: 116 CDACWEHVKGFYYYCNSCDLDLYILCASMPPSVKHQSH 3
           CDAC E+  GF Y+C +C  DL+ILCA  P  V H SH
Sbjct: 97  CDACGENGDGFSYHCKTCGTDLHILCAVFPQCVTHWSH 134


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