BLASTX nr result

ID: Coptis24_contig00017686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017686
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632606.1| PREDICTED: uncharacterized protein LOC100261...   103   1e-20
ref|XP_002268101.1| PREDICTED: uncharacterized protein LOC100261...   103   1e-20
emb|CAN71020.1| hypothetical protein VITISV_011642 [Vitis vinifera]   103   1e-20
ref|XP_002309189.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
gb|ABK95664.1| unknown [Populus trichocarpa]                          103   1e-20

>ref|XP_003632606.1| PREDICTED: uncharacterized protein LOC100261869 isoform 2 [Vitis
           vinifera]
          Length = 332

 Score =  103 bits (258), Expect = 1e-20
 Identities = 55/91 (60%), Positives = 73/91 (80%)
 Frame = +3

Query: 3   LVKLDDDKEVKSQEEIVGKRELLRKGIRQVIRRSNMIAKQVVCIQSALSLGFVSQLWVDT 182
           LV++    E++  E+ V +R  LR G RQV+RRSNM+AKQV+ I+SALSLGFVSQLWVDT
Sbjct: 126 LVRVGGGSELEGAEK-VDERLGLRSG-RQVMRRSNMLAKQVISIRSALSLGFVSQLWVDT 183

Query: 183 GLWEVVAVEVRPSMLSGEIERFLLQDVCQIG 275
             W V+ +EVRP++LSGE+ERFLL+DV ++G
Sbjct: 184 TSWMVLVIEVRPNLLSGELERFLLEDVSRVG 214


>ref|XP_002268101.1| PREDICTED: uncharacterized protein LOC100261869 isoform 1 [Vitis
           vinifera] gi|297735530|emb|CBI18024.3| unnamed protein
           product [Vitis vinifera]
          Length = 377

 Score =  103 bits (258), Expect = 1e-20
 Identities = 55/91 (60%), Positives = 73/91 (80%)
 Frame = +3

Query: 3   LVKLDDDKEVKSQEEIVGKRELLRKGIRQVIRRSNMIAKQVVCIQSALSLGFVSQLWVDT 182
           LV++    E++  E+ V +R  LR G RQV+RRSNM+AKQV+ I+SALSLGFVSQLWVDT
Sbjct: 126 LVRVGGGSELEGAEK-VDERLGLRSG-RQVMRRSNMLAKQVISIRSALSLGFVSQLWVDT 183

Query: 183 GLWEVVAVEVRPSMLSGEIERFLLQDVCQIG 275
             W V+ +EVRP++LSGE+ERFLL+DV ++G
Sbjct: 184 TSWMVLVIEVRPNLLSGELERFLLEDVSRVG 214


>emb|CAN71020.1| hypothetical protein VITISV_011642 [Vitis vinifera]
          Length = 377

 Score =  103 bits (258), Expect = 1e-20
 Identities = 55/91 (60%), Positives = 73/91 (80%)
 Frame = +3

Query: 3   LVKLDDDKEVKSQEEIVGKRELLRKGIRQVIRRSNMIAKQVVCIQSALSLGFVSQLWVDT 182
           LV++    E++  E+ V +R  LR G RQV+RRSNM+AKQV+ I+SALSLGFVSQLWVDT
Sbjct: 126 LVRVGGGSELEGAEK-VDERLGLRSG-RQVMRRSNMLAKQVISIRSALSLGFVSQLWVDT 183

Query: 183 GLWEVVAVEVRPSMLSGEIERFLLQDVCQIG 275
             W V+ +EVRP++LSGE+ERFLL+DV ++G
Sbjct: 184 TSWMVLVIEVRPNLLSGELERFLLEDVSRVG 214


>ref|XP_002309189.1| predicted protein [Populus trichocarpa] gi|222855165|gb|EEE92712.1|
           predicted protein [Populus trichocarpa]
          Length = 347

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/92 (58%), Positives = 72/92 (78%), Gaps = 5/92 (5%)
 Frame = +3

Query: 15  DDDKEVKSQEEIVG---KRELLRKGIR--QVIRRSNMIAKQVVCIQSALSLGFVSQLWVD 179
           D +K+ K ++++V    +R  +R G R  QVIRRS+++AKQV+ IQSALSLGFVSQ+WVD
Sbjct: 94  DGEKDGKEEQDLVAVEKERNKIRNGRRGKQVIRRSSILAKQVISIQSALSLGFVSQIWVD 153

Query: 180 TGLWEVVAVEVRPSMLSGEIERFLLQDVCQIG 275
           T  W V+ VEVRP++LSGE ERFLL+DV Q+G
Sbjct: 154 TKSWVVLVVEVRPNLLSGESERFLLEDVSQVG 185


>gb|ABK95664.1| unknown [Populus trichocarpa]
          Length = 257

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/92 (58%), Positives = 72/92 (78%), Gaps = 5/92 (5%)
 Frame = +3

Query: 15  DDDKEVKSQEEIVG---KRELLRKGIR--QVIRRSNMIAKQVVCIQSALSLGFVSQLWVD 179
           D +K+ K ++++V    +R  +R G R  QVIRRS+++AKQV+ IQSALSLGFVSQ+WVD
Sbjct: 94  DGEKDGKEEQDLVAVEKERNKIRNGRRGKQVIRRSSILAKQVISIQSALSLGFVSQIWVD 153

Query: 180 TGLWEVVAVEVRPSMLSGEIERFLLQDVCQIG 275
           T  W V+ VEVRP++LSGE ERFLL+DV Q+G
Sbjct: 154 TKSWVVLVVEVRPNLLSGESERFLLEDVSQVG 185


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